RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 PTH2Q96A98 100 aa15.59■□□□□ 0.09
COL9A3-213ENST00000489045 PRADC1Q9BSG0 188 aa15.59■□□□□ 0.09
COL9A3-213ENST00000489045 NKX6-2Q9C056 277 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-213ENST00000489045 MAP1LC3BQ9GZQ8 125 aa15.59■□□□□ 0.09
COL9A3-213ENST00000489045 IGKV3D-20A0A0C4DH25 116 aa15.58■□□□□ 0.08
COL9A3-213ENST00000489045 TRBV6-4A0A1B0GX49 114 aa15.58■□□□□ 0.08
COL9A3-213ENST00000489045 K7EP13 123 aa15.58■□□□□ 0.08
COL9A3-213ENST00000489045 TIRAPP58753 221 aa15.58■□□□□ 0.08
COL9A3-213ENST00000489045 RHOHQ15669 191 aa15.58■□□□□ 0.08
COL9A3-213ENST00000489045 HIST1H2BAQ96A08 127 aa15.58■□□□□ 0.08
COL9A3-213ENST00000489045 MSRB1Q9NZV6 116 aa15.58■□□□□ 0.08
COL9A3-213ENST00000489045 FABP5P3A8MUU1 101 aa15.57■□□□□ 0.08
COL9A3-213ENST00000489045 EREGO14944 169 aa15.57■□□□□ 0.08
COL9A3-213ENST00000489045 MAPKAPK5-AS1Q8N8E1 139 aa15.57■□□□□ 0.08
COL9A3-213ENST00000489045 CRYGDP07320 174 aa15.56■□□□□ 0.08
COL9A3-213ENST00000489045 S100A4P26447 101 aaKnown RBP15.56■□□□□ 0.08
COL9A3-213ENST00000489045 ASIPP42127 132 aa15.56■□□□□ 0.08
COL9A3-213ENST00000489045 ZC2HC1AQ96GY0 325 aa15.55■□□□□ 0.08
COL9A3-213ENST00000489045 IGHV3-38A0A0C4DH36 116 aa15.54■□□□□ 0.08
COL9A3-213ENST00000489045 MGST1P10620 155 aaKnown RBP15.54■□□□□ 0.08
COL9A3-213ENST00000489045 FUSP35637 526 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL9A3-213ENST00000489045 C10orf126Q8N4M7 172 aa15.54■□□□□ 0.08
COL9A3-213ENST00000489045 B4DEV8 164 aa15.53■□□□□ 0.08
COL9A3-213ENST00000489045 FHITP49789 147 aa15.53■□□□□ 0.08
COL9A3-213ENST00000489045 ZNF345Q14585 488 aa15.53■□□□□ 0.08
COL9A3-213ENST00000489045 KCNRGQ8N5I3 272 aa15.53■□□□□ 0.08
COL9A3-213ENST00000489045 STOML3Q8TAV4 291 aa15.53■□□□□ 0.08
COL9A3-213ENST00000489045 FMC1Q96HJ9 113 aa15.53■□□□□ 0.08
COL9A3-213ENST00000489045 PARLQ9H300 379 aa15.53■□□□□ 0.08
COL9A3-213ENST00000489045 A0A087WTM6 91 aa15.52■□□□□ 0.08
COL9A3-213ENST00000489045 CRIP1P50238 77 aa15.52■□□□□ 0.08
COL9A3-213ENST00000489045 UBE2G1P62253 170 aa15.52■□□□□ 0.08
COL9A3-213ENST00000489045 LGALSLQ3ZCW2 172 aaPredicted RBP15.52■□□□□ 0.08
COL9A3-213ENST00000489045 OR10J3Q5JRS4 329 aa15.52■□□□□ 0.08
COL9A3-213ENST00000489045 PIK3CD-AS1Q5SR53 167 aa15.52■□□□□ 0.08
COL9A3-213ENST00000489045 CST9LP1Q5W188 147 aa15.52■□□□□ 0.08
COL9A3-213ENST00000489045 PGPEP1Q9NXJ5 209 aa15.52■□□□□ 0.08
COL9A3-213ENST00000489045 ZFP30Q9Y2G7 519 aa15.52■□□□□ 0.08
COL9A3-213ENST00000489045 TRAV8-6A0A0B4J262 113 aa15.51■□□□□ 0.07
COL9A3-213ENST00000489045 A8MWV9 139 aa15.51■□□□□ 0.07
COL9A3-213ENST00000489045 H3BVH4 76 aa15.51■□□□□ 0.07
COL9A3-213ENST00000489045 M0R036 132 aa15.51■□□□□ 0.07
COL9A3-213ENST00000489045 SH2D1AO60880 128 aa15.51■□□□□ 0.07
COL9A3-213ENST00000489045 LINC01556Q5JQF7 62 aa15.51■□□□□ 0.07
COL9A3-213ENST00000489045 Q6ZSN1 163 aa15.51■□□□□ 0.07
COL9A3-213ENST00000489045 COX8CQ7Z4L0 72 aa15.51■□□□□ 0.07
COL9A3-213ENST00000489045 IL36BQ9NZH7 164 aa15.51■□□□□ 0.07
COL9A3-213ENST00000489045 KRBOX1C9JBD0 128 aa15.5■□□□□ 0.07
COL9A3-213ENST00000489045 ZFP2Q6ZN57 461 aa15.5■□□□□ 0.07
COL9A3-213ENST00000489045 OR11H4Q8NGC9 324 aa15.5■□□□□ 0.07
COL9A3-213ENST00000489045 ATP6V0E2Q8NHE4 81 aa15.5■□□□□ 0.07
COL9A3-213ENST00000489045 TCEAL7Q9BRU2 100 aa15.5■□□□□ 0.07
COL9A3-213ENST00000489045 JPT2Q9H910 190 aa15.5■□□□□ 0.07
COL9A3-213ENST00000489045 DNLZQ5SXM8 178 aa15.49■□□□□ 0.07
COL9A3-213ENST00000489045 FAM162BQ5T6X4 162 aa15.49■□□□□ 0.07
COL9A3-213ENST00000489045 LELP1Q5T871 98 aa15.49■□□□□ 0.07
COL9A3-213ENST00000489045 CDPF1Q6NVV7 123 aa15.49■□□□□ 0.07
COL9A3-213ENST00000489045 GTSF1LQ9H1H1 148 aa15.49■□□□□ 0.07
COL9A3-213ENST00000489045 GRIFINA4D1Z8 144 aa15.48■□□□□ 0.07
COL9A3-213ENST00000489045 SEC11BP0C7V7 166 aa15.48■□□□□ 0.07
COL9A3-213ENST00000489045 AKR1C3P42330 323 aa15.48■□□□□ 0.07
COL9A3-213ENST00000489045 Q8N1X5 172 aa15.48■□□□□ 0.07
COL9A3-213ENST00000489045 FAM213BQ8TBF2 198 aa15.48■□□□□ 0.07
COL9A3-213ENST00000489045 TRBV6-1A0A0K0K1D8 114 aa15.47■□□□□ 0.07
COL9A3-213ENST00000489045 HMSDA8MTL9 139 aa15.47■□□□□ 0.07
COL9A3-213ENST00000489045 PAGE4O60829 102 aa15.47■□□□□ 0.07
COL9A3-213ENST00000489045 LTAP01374 205 aa15.47■□□□□ 0.07
COL9A3-213ENST00000489045 ARMS2P0C7Q2 107 aa15.47■□□□□ 0.07
COL9A3-213ENST00000489045 ZNF674Q2M3X9 581 aa15.47■□□□□ 0.07
COL9A3-213ENST00000489045 DMRTA1Q5VZB9 504 aa15.47■□□□□ 0.07
COL9A3-213ENST00000489045 UFSP1Q6NVU6 142 aa15.47■□□□□ 0.07
COL9A3-213ENST00000489045 SAMD10Q9BYL1 202 aa15.47■□□□□ 0.07
COL9A3-213ENST00000489045 BOLA1Q9Y3E2 137 aa15.47■□□□□ 0.07
COL9A3-213ENST00000489045 A0A1B0GV50 99 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 GAGE12JA6NER3 117 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 IBA57-AS1B1ANH7 110 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 IGHV3-30P01768 117 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 IGHV3-33P01772 117 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 IGHV3-30-3P0DP02 117 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 IGHV3-30-5P0DP03 117 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 GAGE1Q13065 139 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 GAGE4Q13068 117 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 GAGE5Q13069 117 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 GAGE13Q4V321 117 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 SYT8Q8NBV8 401 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 SFT2D1Q8WV19 159 aa15.46■□□□□ 0.07
COL9A3-213ENST00000489045 ZNF471Q9BX82 626 aaPredicted RBP15.46■□□□□ 0.07
COL9A3-213ENST00000489045 TMSB15BA0A087X1C1 80 aa15.45■□□□□ 0.06
COL9A3-213ENST00000489045 A0A0D9SG52 128 aa15.45■□□□□ 0.06
COL9A3-213ENST00000489045 KANTRA0A1W2PQU2 76 aa15.45■□□□□ 0.06
COL9A3-213ENST00000489045 UMAD1C9J7I0 102 aa15.45■□□□□ 0.06
COL9A3-213ENST00000489045 BCL2L11O43521 198 aa15.45■□□□□ 0.06
COL9A3-213ENST00000489045 LINC00694P0DN24 101 aa15.45■□□□□ 0.06
COL9A3-213ENST00000489045 MBD3L1Q8WWY6 194 aa15.45■□□□□ 0.06
COL9A3-213ENST00000489045 SCRT2Q9NQ03 307 aa15.45■□□□□ 0.06
COL9A3-213ENST00000489045 PSCAO43653 123 aa15.44■□□□□ 0.06
COL9A3-213ENST00000489045 LINC01559Q495D7 138 aa15.44■□□□□ 0.06
COL9A3-213ENST00000489045 C14orf178Q8N769 122 aaPredicted RBP15.44■□□□□ 0.06
COL9A3-213ENST00000489045 Q9HAA7 133 aa15.44■□□□□ 0.06
COL9A3-213ENST00000489045 Q9UF83 564 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms