RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 TCL1AP56279 114 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 RIPPLY3P57055 190 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 ODF3L2Q3SX64 289 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 OR10J3Q5JRS4 329 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 DEFB125Q8N687 156 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 C3orf56Q8N813 242 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 KNCNA6PVL3 124 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 IGKV3-20P01619 116 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 C3orf79P0CE67 100 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 KIR3DS1Q14943 382 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 Q6ZQT7 251 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 APRG1Q8IVJ8 170 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 OR2K2Q8NGT1 345 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 TRAV9-2A0A087WT02 112 aa8.1□□□□□ -1.11
COL21A1-211ENST00000488912 SMIM27A0A1W2PRY6 76 aa8.1□□□□□ -1.11
COL21A1-211ENST00000488912 CT83Q5H943 113 aa8.1□□□□□ -1.11
COL21A1-211ENST00000488912 TSKUQ8WUA8 353 aa8.1□□□□□ -1.11
COL21A1-211ENST00000488912 TMEM158Q8WZ71 300 aa8.1□□□□□ -1.11
COL21A1-211ENST00000488912 KCNS1Q96KK3 526 aa8.1□□□□□ -1.11
COL21A1-211ENST00000488912 AMMECR1LQ6DCA0 310 aa8.09□□□□□ -1.11
COL21A1-211ENST00000488912 C12orf54Q6X4T0 127 aa8.09□□□□□ -1.11
COL21A1-211ENST00000488912 TRBV7-9A0A0J9YWB2 115 aa8.09□□□□□ -1.11
COL21A1-211ENST00000488912 FABP5P3A8MUU1 101 aa8.09□□□□□ -1.11
COL21A1-211ENST00000488912 HLA-DRB4P13762 266 aa8.09□□□□□ -1.11
COL21A1-211ENST00000488912 FER1L6-AS1Q8NA97 138 aa8.09□□□□□ -1.11
COL21A1-211ENST00000488912 GTSF1Q8WW33 167 aa8.09□□□□□ -1.11
COL21A1-211ENST00000488912 GNB1LQ9BYB4 327 aa8.09□□□□□ -1.11
COL21A1-211ENST00000488912 HLA-DRB4X5D2U9 266 aa8.09□□□□□ -1.11
COL21A1-211ENST00000488912 TMSB15BA0A087X1C1 80 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 HIGD1CA8MV81 97 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 A8MWL6 223 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 KLLNB2CW77 178 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 H3BMM0 161 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 ZNF324O75467 553 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-211ENST00000488912 DUSP14O95147 198 aaKnown RBP8.08□□□□□ -1.12
COL21A1-211ENST00000488912 AMTP48728 403 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 ODF3Q96PU9 254 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 TMEM189A5PLL7 270 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 SNURFLB1AK76 121 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 OR11H12B2RN74 326 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 M0R2Z0 102 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 CD7P09564 240 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 RNASE4P34096 147 aaKnown RBP8.08□□□□□ -1.12
COL21A1-211ENST00000488912 INSL3P51460 131 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 BEAN1Q3B7T3 259 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 SHISA2Q6UWI4 295 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 AMTNQ6UX39 209 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 RCHY1Q96PM5 261 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 C11orf21Q9P2W6 132 aa8.08□□□□□ -1.12
COL21A1-211ENST00000488912 RBMY1BA6NDE4 496 aaKnown RBP8.07□□□□□ -1.12
COL21A1-211ENST00000488912 RBMY1EA6NEQ0 496 aaKnown RBP8.07□□□□□ -1.12
COL21A1-211ENST00000488912 SPINK4O60575 86 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 ORM1P02763 201 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 RBMY1DP0C7P1 496 aaKnown RBP8.07□□□□□ -1.12
COL21A1-211ENST00000488912 SPINK13Q1W4C9 94 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 BVES-AS1Q5T3Y7 98 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 NUP35Q8NFH5 326 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 NAT8BQ9UHF3 227 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 TRAV12-2A0A075B6T6 113 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 IGKV3D-20A0A0C4DH25 116 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 A0A1B0GV72 72 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 A8MTW9 85 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 MT-ND6P03923 174 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 LEPP41159 167 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 LINC01559Q495D7 138 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 COX19Q49B96 90 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 UFSP1Q6NVU6 142 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 ZNF575Q86XF7 245 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 WFDC9Q8NEX5 89 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 GFRA4Q9GZZ7 299 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 WFDC10AQ9H1F0 79 aa8.07□□□□□ -1.12
COL21A1-211ENST00000488912 IGLL1P15814 213 aa8.06□□□□□ -1.12
COL21A1-211ENST00000488912 Q6AWC8 147 aa8.06□□□□□ -1.12
COL21A1-211ENST00000488912 WDR73Q6P4I2 378 aa8.06□□□□□ -1.12
COL21A1-211ENST00000488912 TMEM136Q6ZRR5 245 aa8.06□□□□□ -1.12
COL21A1-211ENST00000488912 TRAV21A0A0B4J279 112 aa8.06□□□□□ -1.12
COL21A1-211ENST00000488912 FXYD7P58549 80 aa8.06□□□□□ -1.12
COL21A1-211ENST00000488912 MPV17L2Q567V2 206 aa8.06□□□□□ -1.12
COL21A1-211ENST00000488912 MRPL54Q6P161 138 aaKnown RBP8.06□□□□□ -1.12
COL21A1-211ENST00000488912 NEGR1Q7Z3B1 354 aa8.06□□□□□ -1.12
COL21A1-211ENST00000488912 PGLYRP4Q96LB8 373 aa8.06□□□□□ -1.12
COL21A1-211ENST00000488912 C19orf73Q9NVV2 129 aa8.06□□□□□ -1.12
COL21A1-211ENST00000488912 LOC102724200A0A096LPH7 203 aaPredicted RBP8.05□□□□□ -1.12
COL21A1-211ENST00000488912 FAM231BA6NCW3 169 aa8.05□□□□□ -1.12
COL21A1-211ENST00000488912 FAM110AQ9BQ89 295 aa8.05□□□□□ -1.12
COL21A1-211ENST00000488912 MCRIP2Q9BUT9 160 aaKnown RBP8.05□□□□□ -1.12
COL21A1-211ENST00000488912 TRAV12-3A0A0B4J271 114 aa8.04□□□□□ -1.12
COL21A1-211ENST00000488912 C7orf71A4D174 169 aa8.04□□□□□ -1.12
COL21A1-211ENST00000488912 PMCHP20382 165 aa8.04□□□□□ -1.12
COL21A1-211ENST00000488912 MUC21Q5SSG8 566 aa8.04□□□□□ -1.12
COL21A1-211ENST00000488912 BORCS7Q96B45 105 aa8.04□□□□□ -1.12
COL21A1-211ENST00000488912 TPPP3Q9BW30 176 aa8.04□□□□□ -1.12
COL21A1-211ENST00000488912 ST20Q9HBF5 79 aa8.04□□□□□ -1.12
COL21A1-211ENST00000488912 TRAV8-6A0A0B4J262 113 aa8.04□□□□□ -1.12
COL21A1-211ENST00000488912 SMIM17P0DL12 118 aa8.04□□□□□ -1.12
COL21A1-211ENST00000488912 FOXA3P55318 350 aaPredicted RBP8.04□□□□□ -1.12
COL21A1-211ENST00000488912 CMC4P56277 68 aaPredicted RBP8.04□□□□□ -1.12
COL21A1-211ENST00000488912 KIAA1644Q3SXP7 199 aa8.04□□□□□ -1.12
COL21A1-211ENST00000488912 STHQ8IWL8 128 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms