RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 LYZL1Q6UWQ5 148 aa9.43□□□□□ -0.9
NELFE-209ENST00000488426 ZNF575Q86XF7 245 aa9.43□□□□□ -0.9
NELFE-209ENST00000488426 GATD1Q8NB37 220 aa9.43□□□□□ -0.9
NELFE-209ENST00000488426 MAP6D1Q9H9H5 199 aa9.43□□□□□ -0.9
NELFE-209ENST00000488426 F2Z2F3 143 aa9.42□□□□□ -0.9
NELFE-209ENST00000488426 K7EP13 123 aa9.42□□□□□ -0.9
NELFE-209ENST00000488426 SAP30O75446 220 aa9.42□□□□□ -0.9
NELFE-209ENST00000488426 HLA-DRB4P13762 266 aa9.42□□□□□ -0.9
NELFE-209ENST00000488426 RNASE4P34096 147 aaKnown RBP9.42□□□□□ -0.9
NELFE-209ENST00000488426 TPPP3Q9BW30 176 aa9.42□□□□□ -0.9
NELFE-209ENST00000488426 HLA-DRB4X5D2U9 266 aa9.42□□□□□ -0.9
NELFE-209ENST00000488426 J3KRW8 73 aa9.42□□□□□ -0.9
NELFE-209ENST00000488426 CIDEAO60543 219 aa9.42□□□□□ -0.9
NELFE-209ENST00000488426 IGLV1-51P01701 117 aa9.42□□□□□ -0.9
NELFE-209ENST00000488426 LINC00482Q8N8I6 264 aa9.42□□□□□ -0.9
NELFE-209ENST00000488426 RNASE8Q8TDE3 154 aaKnown RBP9.42□□□□□ -0.9
NELFE-209ENST00000488426 CNFNQ9BYD5 112 aa9.42□□□□□ -0.9
NELFE-209ENST00000488426 C7orf71A4D174 169 aa9.41□□□□□ -0.9
NELFE-209ENST00000488426 IGLL1P15814 213 aa9.41□□□□□ -0.9
NELFE-209ENST00000488426 CMC4P56277 68 aaPredicted RBP9.41□□□□□ -0.9
NELFE-209ENST00000488426 KPRPQ5T749 579 aaPredicted RBP9.41□□□□□ -0.9
NELFE-209ENST00000488426 AMTNQ6UX39 209 aa9.41□□□□□ -0.9
NELFE-209ENST00000488426 WFDC9Q8NEX5 89 aa9.41□□□□□ -0.9
NELFE-209ENST00000488426 GRIFINA4D1Z8 144 aa9.4□□□□□ -0.9
NELFE-209ENST00000488426 H3BMM0 161 aa9.4□□□□□ -0.9
NELFE-209ENST00000488426 SLAQ13239 276 aa9.4□□□□□ -0.9
NELFE-209ENST00000488426 KNCNA6PVL3 124 aa9.4□□□□□ -0.91
NELFE-209ENST00000488426 HSBP1L1C9JCN9 74 aa9.4□□□□□ -0.91
NELFE-209ENST00000488426 IGKV3-20P01619 116 aa9.4□□□□□ -0.91
NELFE-209ENST00000488426 PPBPP02775 128 aa9.4□□□□□ -0.91
NELFE-209ENST00000488426 OR5AL1P0C617 328 aa9.4□□□□□ -0.91
NELFE-209ENST00000488426 KIR3DS1Q14943 382 aa9.4□□□□□ -0.91
NELFE-209ENST00000488426 Q6ZQT7 251 aa9.4□□□□□ -0.91
NELFE-209ENST00000488426 ZNF493Q6ZR52 646 aa9.4□□□□□ -0.91
NELFE-209ENST00000488426 CLUHP3Q96NS8 147 aa9.4□□□□□ -0.91
NELFE-209ENST00000488426 NAGKQ9UJ70 344 aa9.4□□□□□ -0.91
NELFE-209ENST00000488426 SNAI2O43623 268 aa9.39□□□□□ -0.91
NELFE-209ENST00000488426 MED14OSP0DP75 135 aa9.39□□□□□ -0.91
NELFE-209ENST00000488426 IQCJQ1A5X6 159 aa9.39□□□□□ -0.91
NELFE-209ENST00000488426 ODF3L2Q3SX64 289 aa9.39□□□□□ -0.91
NELFE-209ENST00000488426 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
NELFE-209ENST00000488426 FAM110AQ9BQ89 295 aa9.39□□□□□ -0.91
NELFE-209ENST00000488426 SSBP4Q9BWG4 385 aaPredicted RBP9.39□□□□□ -0.91
NELFE-209ENST00000488426 SPINK13Q1W4C9 94 aa9.38□□□□□ -0.91
NELFE-209ENST00000488426 ANXA2RQ3ZCQ2 193 aa9.38□□□□□ -0.91
NELFE-209ENST00000488426 OR11H12B2RN74 326 aa9.38□□□□□ -0.91
NELFE-209ENST00000488426 M0R2Z0 102 aa9.38□□□□□ -0.91
NELFE-209ENST00000488426 ZNF324O75467 553 aaPredicted RBP9.38□□□□□ -0.91
NELFE-209ENST00000488426 ASIPP42127 132 aa9.38□□□□□ -0.91
NELFE-209ENST00000488426 CACNG7P62955 275 aa9.38□□□□□ -0.91
NELFE-209ENST00000488426 Q0VG73 95 aa9.38□□□□□ -0.91
NELFE-209ENST00000488426 KIAA1644Q3SXP7 199 aa9.38□□□□□ -0.91
NELFE-209ENST00000488426 TDRG1Q3Y452 100 aa9.38□□□□□ -0.91
NELFE-209ENST00000488426 OR10J3Q5JRS4 329 aa9.38□□□□□ -0.91
NELFE-209ENST00000488426 FAM159AQ6UWV7 190 aa9.38□□□□□ -0.91
NELFE-209ENST00000488426 AGRNO00468 2067 aa9.37□□□□□ -0.91
NELFE-209ENST00000488426 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
NELFE-209ENST00000488426 NTF3P20783 257 aa9.37□□□□□ -0.91
NELFE-209ENST00000488426 SRIP30626 198 aa9.37□□□□□ -0.91
NELFE-209ENST00000488426 INSL3P51460 131 aa9.37□□□□□ -0.91
NELFE-209ENST00000488426 TWIST1Q15672 202 aa9.37□□□□□ -0.91
NELFE-209ENST00000488426 MAJINQ3KP22 176 aa9.37□□□□□ -0.91
NELFE-209ENST00000488426 MUC21Q5SSG8 566 aa9.37□□□□□ -0.91
NELFE-209ENST00000488426 SORL1Q92673 2214 aa9.37□□□□□ -0.91
NELFE-209ENST00000488426 DNAH9Q9NYC9 4486 aa9.37□□□□□ -0.91
NELFE-209ENST00000488426 IGHV4-4A0A075B6R2 117 aa9.36□□□□□ -0.91
NELFE-209ENST00000488426 LOC102724200A0A096LPH7 203 aaPredicted RBP9.36□□□□□ -0.91
NELFE-209ENST00000488426 KRTAP10-11P60412 298 aa9.36□□□□□ -0.91
NELFE-209ENST00000488426 TRAV12-2A0A075B6T6 113 aa9.36□□□□□ -0.91
NELFE-209ENST00000488426 RBMY1BA6NDE4 496 aaKnown RBP9.36□□□□□ -0.91
NELFE-209ENST00000488426 RBMY1EA6NEQ0 496 aaKnown RBP9.36□□□□□ -0.91
NELFE-209ENST00000488426 H3BVH4 76 aa9.36□□□□□ -0.91
NELFE-209ENST00000488426 RBMY1DP0C7P1 496 aaKnown RBP9.36□□□□□ -0.91
NELFE-209ENST00000488426 S100A4P26447 101 aaKnown RBP9.36□□□□□ -0.91
NELFE-209ENST00000488426 C20orf144Q9BQM9 153 aa9.36□□□□□ -0.91
NELFE-209ENST00000488426 ALKBH7Q9BT30 221 aaPredicted RBP9.36□□□□□ -0.91
NELFE-209ENST00000488426 TMEM191AQ9H0A3 160 aa9.36□□□□□ -0.91
NELFE-209ENST00000488426 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
NELFE-209ENST00000488426 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
NELFE-209ENST00000488426 STHQ8IWL8 128 aa9.35□□□□□ -0.91
NELFE-209ENST00000488426 SCRT2Q9NQ03 307 aa9.35□□□□□ -0.91
NELFE-209ENST00000488426 C9orf66Q5T8R8 295 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 FAM104BQ5XKR9 115 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 SMIM15Q7Z3B0 74 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 OR10AG1Q8NH19 301 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 COL7A1Q02388 2944 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 IGHV1OR15-1A0A075B7D0 117 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 CRXO43186 299 aaPredicted RBP9.34□□□□□ -0.91
NELFE-209ENST00000488426 GNRH2O43555 120 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 RNASE3P12724 160 aaKnown RBP9.34□□□□□ -0.91
NELFE-209ENST00000488426 PTTG1IPP53801 180 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 COL5A1-AS1Q5SY13 56 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 SPANXN1Q5VSR9 72 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 TRPT1Q86TN4 253 aaKnown RBP9.34□□□□□ -0.91
NELFE-209ENST00000488426 BAGE3Q86Y29 109 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 C18orf32Q8TCD1 76 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 MIEN1Q9BRT3 115 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 TP53TG3Q9ULZ0 132 aa9.34□□□□□ -0.91
NELFE-209ENST00000488426 CD7P09564 240 aa9.33□□□□□ -0.92
NELFE-209ENST00000488426 ESDP10768 282 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms