RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 IFNA7P01567 189 aa15.25■□□□□ 0.03
PTPN4-211ENST00000488279 ZNF506Q5JVG8 444 aa15.25■□□□□ 0.03
PTPN4-211ENST00000488279 TRAV34A0A0B4J273 112 aa15.24■□□□□ 0.03
PTPN4-211ENST00000488279 CTXND1A0A1B0GTU2 59 aa15.24■□□□□ 0.03
PTPN4-211ENST00000488279 RNASE3P12724 160 aaKnown RBP15.24■□□□□ 0.03
PTPN4-211ENST00000488279 ZNF726P1Q15940 193 aa15.24■□□□□ 0.03
PTPN4-211ENST00000488279 OR2T35Q8NGX2 323 aa15.24■□□□□ 0.03
PTPN4-211ENST00000488279 NKX6-2Q9C056 277 aaPredicted RBP15.24■□□□□ 0.03
PTPN4-211ENST00000488279 FABP5P3A8MUU1 101 aa15.23■□□□□ 0.03
PTPN4-211ENST00000488279 MGST1P10620 155 aaKnown RBP15.23■□□□□ 0.03
PTPN4-211ENST00000488279 S100A4P26447 101 aaKnown RBP15.23■□□□□ 0.03
PTPN4-211ENST00000488279 LINC01556Q5JQF7 62 aa15.23■□□□□ 0.03
PTPN4-211ENST00000488279 OR10J3Q5JRS4 329 aa15.23■□□□□ 0.03
PTPN4-211ENST00000488279 UBE2G2P60604 165 aa15.22■□□□□ 0.03
PTPN4-211ENST00000488279 AKR1C8PQ5T2L2 129 aa15.22■□□□□ 0.03
PTPN4-211ENST00000488279 ARL2-SNX15V9GYD0 113 aa15.22■□□□□ 0.03
PTPN4-211ENST00000488279 IGKV3D-20A0A0C4DH25 116 aa15.21■□□□□ 0.03
PTPN4-211ENST00000488279 PSCAO43653 123 aa15.21■□□□□ 0.03
PTPN4-211ENST00000488279 A8MWV9 139 aa15.2■□□□□ 0.02
PTPN4-211ENST00000488279 IBA57-AS1B1ANH7 110 aa15.2■□□□□ 0.02
PTPN4-211ENST00000488279 PEX7O00628 323 aa15.2■□□□□ 0.02
PTPN4-211ENST00000488279 FGF8P55075 233 aaPredicted RBP15.2■□□□□ 0.02
PTPN4-211ENST00000488279 PIK3CD-AS1Q5SR53 167 aa15.2■□□□□ 0.02
PTPN4-211ENST00000488279 LELP1Q5T871 98 aa15.2■□□□□ 0.02
PTPN4-211ENST00000488279 ATP6V0E2Q8NHE4 81 aa15.2■□□□□ 0.02
PTPN4-211ENST00000488279 HIST1H2BAQ96A08 127 aa15.2■□□□□ 0.02
PTPN4-211ENST00000488279 GTSF1LQ9H1H1 148 aa15.2■□□□□ 0.02
PTPN4-211ENST00000488279 FAM74A7A6NL05 159 aa15.19■□□□□ 0.02
PTPN4-211ENST00000488279 ASIPP42127 132 aa15.19■□□□□ 0.02
PTPN4-211ENST00000488279 LGALSLQ3ZCW2 172 aaPredicted RBP15.19■□□□□ 0.02
PTPN4-211ENST00000488279 ZFP2Q6ZN57 461 aa15.19■□□□□ 0.02
PTPN4-211ENST00000488279 XGP55808 180 aa15.18■□□□□ 0.02
PTPN4-211ENST00000488279 KRTAP10-1P60331 282 aa15.18■□□□□ 0.02
PTPN4-211ENST00000488279 EPM2AB3EWF7 344 aa15.17■□□□□ 0.02
PTPN4-211ENST00000488279 Q86TA4 180 aa15.17■□□□□ 0.02
PTPN4-211ENST00000488279 PARLQ9H300 379 aa15.17■□□□□ 0.02
PTPN4-211ENST00000488279 IL36BQ9NZH7 164 aa15.17■□□□□ 0.02
PTPN4-211ENST00000488279 B4DEV8 164 aa15.16■□□□□ 0.02
PTPN4-211ENST00000488279 IGHV3-30P01768 117 aa15.16■□□□□ 0.02
PTPN4-211ENST00000488279 IGHV3-33P01772 117 aa15.16■□□□□ 0.02
PTPN4-211ENST00000488279 IGHV3-30-3P0DP02 117 aa15.16■□□□□ 0.02
PTPN4-211ENST00000488279 IGHV3-30-5P0DP03 117 aa15.16■□□□□ 0.02
PTPN4-211ENST00000488279 GCSHP23434 173 aa15.16■□□□□ 0.02
PTPN4-211ENST00000488279 Q6ZSN1 163 aa15.16■□□□□ 0.02
PTPN4-211ENST00000488279 ZFP30Q9Y2G7 519 aa15.16■□□□□ 0.02
PTPN4-211ENST00000488279 MAP1LC3B2A6NCE7 125 aa15.15■□□□□ 0.02
PTPN4-211ENST00000488279 G3V3Q6 166 aa15.15■□□□□ 0.02
PTPN4-211ENST00000488279 ARPC5O15511 151 aa15.15■□□□□ 0.02
PTPN4-211ENST00000488279 CRIP1P50238 77 aa15.15■□□□□ 0.02
PTPN4-211ENST00000488279 RGS21Q2M5E4 152 aa15.15■□□□□ 0.02
PTPN4-211ENST00000488279 MAP1LC3BQ9GZQ8 125 aa15.15■□□□□ 0.02
PTPN4-211ENST00000488279 Q9HAA7 133 aa15.15■□□□□ 0.02
PTPN4-211ENST00000488279 LRCOL1A6NCL2 159 aa15.14■□□□□ 0.01
PTPN4-211ENST00000488279 ZC2HC1AQ96GY0 325 aa15.14■□□□□ 0.01
PTPN4-211ENST00000488279 FMC1Q96HJ9 113 aa15.14■□□□□ 0.01
PTPN4-211ENST00000488279 CYTL1Q9NRR1 136 aa15.14■□□□□ 0.01
PTPN4-211ENST00000488279 GAGE12JA6NER3 117 aa15.13■□□□□ 0.01
PTPN4-211ENST00000488279 KRBOX1C9JBD0 128 aa15.13■□□□□ 0.01
PTPN4-211ENST00000488279 GAGE1Q13065 139 aa15.13■□□□□ 0.01
PTPN4-211ENST00000488279 GAGE4Q13068 117 aa15.13■□□□□ 0.01
PTPN4-211ENST00000488279 GAGE5Q13069 117 aa15.13■□□□□ 0.01
PTPN4-211ENST00000488279 GAGE13Q4V321 117 aa15.13■□□□□ 0.01
PTPN4-211ENST00000488279 FAM162BQ5T6X4 162 aa15.13■□□□□ 0.01
PTPN4-211ENST00000488279 DMRTA1Q5VZB9 504 aa15.13■□□□□ 0.01
PTPN4-211ENST00000488279 COX8CQ7Z4L0 72 aa15.13■□□□□ 0.01
PTPN4-211ENST00000488279 SYT8Q8NBV8 401 aa15.13■□□□□ 0.01
PTPN4-211ENST00000488279 STOML3Q8TAV4 291 aa15.13■□□□□ 0.01
PTPN4-211ENST00000488279 IGLV5-52A0A0A0MRZ9 124 aa15.12■□□□□ 0.01
PTPN4-211ENST00000488279 H3BVH4 76 aa15.12■□□□□ 0.01
PTPN4-211ENST00000488279 M0R036 132 aa15.12■□□□□ 0.01
PTPN4-211ENST00000488279 ARMS2P0C7Q2 107 aa15.12■□□□□ 0.01
PTPN4-211ENST00000488279 UBE2G1P62253 170 aa15.12■□□□□ 0.01
PTPN4-211ENST00000488279 DNLZQ5SXM8 178 aa15.12■□□□□ 0.01
PTPN4-211ENST00000488279 SAMD10Q9BYL1 202 aa15.12■□□□□ 0.01
PTPN4-211ENST00000488279 JPT2Q9H910 190 aa15.12■□□□□ 0.01
PTPN4-211ENST00000488279 SH2D1AO60880 128 aa15.11■□□□□ 0.01
PTPN4-211ENST00000488279 FHITP49789 147 aa15.11■□□□□ 0.01
PTPN4-211ENST00000488279 LAGE3Q14657 143 aa15.11■□□□□ 0.01
PTPN4-211ENST00000488279 CST9LP1Q5W188 147 aa15.11■□□□□ 0.01
PTPN4-211ENST00000488279 UFSP1Q6NVU6 142 aa15.11■□□□□ 0.01
PTPN4-211ENST00000488279 NTN5Q8WTR8 489 aaPredicted RBP15.11■□□□□ 0.01
PTPN4-211ENST00000488279 TCEAL7Q9BRU2 100 aa15.11■□□□□ 0.01
PTPN4-211ENST00000488279 GRIFINA4D1Z8 144 aa15.1■□□□□ 0.01
PTPN4-211ENST00000488279 RHODO00212 210 aa15.1■□□□□ 0.01
PTPN4-211ENST00000488279 OR11H4Q8NGC9 324 aa15.1■□□□□ 0.01
PTPN4-211ENST00000488279 TM2D2Q9BX73 214 aa15.1■□□□□ 0.01
PTPN4-211ENST00000488279 A0A087WWC5 75 aa15.09■□□□□ 0.01
PTPN4-211ENST00000488279 LINC00694P0DN24 101 aa15.09■□□□□ 0.01
PTPN4-211ENST00000488279 C14orf178Q8N769 122 aaPredicted RBP15.09■□□□□ 0.01
PTPN4-211ENST00000488279 Q8N814 137 aa15.09■□□□□ 0.01
PTPN4-211ENST00000488279 Q9UF83 564 aa15.09■□□□□ 0.01
PTPN4-211ENST00000488279 PHLDA3Q9Y5J5 127 aa15.09■□□□□ 0.01
PTPN4-211ENST00000488279 FAT1Q14517 4588 aa15.08■□□□□ 0.01
PTPN4-211ENST00000488279 TRBV6-1A0A0K0K1D8 114 aa15.08■□□□□ 0
PTPN4-211ENST00000488279 LTAP01374 205 aa15.08■□□□□ 0
PTPN4-211ENST00000488279 ZNF674Q2M3X9 581 aa15.08■□□□□ 0
PTPN4-211ENST00000488279 FRZBQ92765 325 aa15.08■□□□□ 0
PTPN4-211ENST00000488279 SMLR1H3BR10 107 aa15.07■□□□□ 0
PTPN4-211ENST00000488279 FAM74A4Q5TZK3 123 aa15.07■□□□□ 0
PTPN4-211ENST00000488279 TRAV8-3A0A0A6YYJ7 113 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms