RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 TRAV13-2A0A0B4J235 113 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 IGHV1-3A0A0C4DH29 117 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 A0A1B0GWA3 101 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 KRTAP4-16G5E9R7 235 aaPredicted RBP2.67□□□□□ -1.98
VPS8-224ENST00000488255 SH2D1AO60880 128 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 IGHV1-46P01743 117 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 IL4P05112 153 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 INAFM2P0DMQ5 153 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 ZNF816Q0VGE8 651 aaPredicted RBP2.67□□□□□ -1.98
VPS8-224ENST00000488255 RHOHQ15669 191 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 ESRGQ1W209 222 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 SPANXN5Q5MJ07 72 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 CYB561D1Q8N8Q1 229 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 SMCR5Q8TEV8 140 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 B9D2Q9BPU9 175 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 CXCL16Q9H2A7 254 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 RPP21Q9H633 154 aaKnown RBP2.67□□□□□ -1.98
VPS8-224ENST00000488255 GNG13Q9P2W3 67 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 TMEM14AQ9Y6G1 99 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 TARBP1Q13395 1621 aaKnown RBP2.67□□□□□ -1.98
VPS8-224ENST00000488255 EHBP1L1Q8N3D4 1523 aa2.67□□□□□ -1.98
VPS8-224ENST00000488255 DIP2BQ9P265 1576 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 LAMC3Q9Y6N6 1575 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 C1orf167Q5SNV9 1468 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 ITSN1Q15811 1721 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 COL24A1Q17RW2 1714 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 CDC42BPAQ5VT25 1732 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 IGHV3-73A0A0B4J1V6 119 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 IGKV1-12A0A0C4DH73 117 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 TRBV10-3A0A0K0K1G6 114 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 A0A1W2PQD3 144 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 K7EM74 188 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 IGKV1D-12P01611 117 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 IGKV1-16P04430 117 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 DEFB116Q30KQ4 102 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 LINC00483Q53H64 154 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 PATE2Q6UY27 113 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 FP248Q71RG6 208 aaPredicted RBP2.66□□□□□ -1.98
VPS8-224ENST00000488255 DYNAPQ8N1N2 210 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 AMELYQ99218 206 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 RETNLBQ9BQ08 111 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 NABP2Q9BQ15 211 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 LIMD2Q9BT23 127 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 C11orf1Q9H5F2 150 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 MANBALQ9NQG1 85 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 C8orf17Q9NRJ1 99 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 HHLA3Q9XRX5 114 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 ARL2-SNX15V9GYD0 113 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 KIAA0586Q9BVV6 1533 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 RGPD8O14715 1765 aaPredicted RBP2.66□□□□□ -1.98
VPS8-224ENST00000488255 RGPD5Q99666 1765 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 POLEQ07864 2286 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 ALPK3Q96L96 1907 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 DIP2CQ9Y2E4 1556 aa2.66□□□□□ -1.98
VPS8-224ENST00000488255 KDM6BO15054 1643 aa2.65□□□□□ -1.98
VPS8-224ENST00000488255 NLRC5Q86WI3 1866 aa2.65□□□□□ -1.98
VPS8-224ENST00000488255 TRAV1-1A0A0B4J248 108 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 FXYD1O00168 92 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 SSBP1Q04837 148 aaKnown RBP2.65□□□□□ -1.99
VPS8-224ENST00000488255 KLKP1Q107X0 134 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 ZNF56Q15929 161 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 IGFBP7Q16270 282 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 ATP5EP2Q5VTU8 51 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 CASC2Q6XLA1 102 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 NDUFA11Q86Y39 141 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 LINC00269Q8N2A0 174 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 PRO1854Q9UHT4 67 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 DOCK9Q9BZ29 2069 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 IQGAP2Q13576 1575 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 OBSL1O75147 1896 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 TSPOAP1O95153 1857 aa2.65□□□□□ -1.99
VPS8-224ENST00000488255 RGPD3A6NKT7 1758 aaPredicted RBP2.64□□□□□ -1.99
VPS8-224ENST00000488255 STRCQ7RTU9 1775 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 PTPRFP10586 1907 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 PPRC1Q5VV67 1664 aaKnown RBP2.64□□□□□ -1.99
VPS8-224ENST00000488255 ITSN2Q9NZM3 1697 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 EML6Q6ZMW3 1958 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 TRBV6-7A0A0A0MS04 114 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 TRBV7-1A0A0A6YYK4 115 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 A0A0B4J2C4 111 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 IGKV1-6A0A0C4DH72 117 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 LOC285095A0A1B0GVY8 99 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 A6NED7 52 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 NUPR1O60356 82 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 LY6HO94772 140 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 IGKV1-39P01597 117 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 IGKV1D-39P04432 117 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 XCL1P47992 114 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 LY6EQ16553 131 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 RNASE13Q5GAN3 156 aaKnown RBP2.64□□□□□ -1.99
VPS8-224ENST00000488255 DEFB121Q5J5C9 76 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 LYZL1Q6UWQ5 148 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 C2orf82Q6UX34 121 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 Q6ZQT7 251 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 RNASE6Q93091 150 aaKnown RBP2.64□□□□□ -1.99
VPS8-224ENST00000488255 IFI27L1Q96BM0 104 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 ZNRD1Q9P1U0 126 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 DOCK1Q14185 1865 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 IQGAP3Q86VI3 1631 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms