RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PPP1R17O96001 155 aa19.61■□□□□ 0.73
HLA-C-208ENST00000487245 GTSCR1Q86UQ5 136 aa19.61■□□□□ 0.73
HLA-C-208ENST00000487245 TOMM6Q96B49 74 aa19.61■□□□□ 0.73
HLA-C-208ENST00000487245 CST9LQ9H4G1 147 aa19.61■□□□□ 0.73
HLA-C-208ENST00000487245 USP9XQ93008 2570 aaPredicted RBP19.61■□□□□ 0.73
HLA-C-208ENST00000487245 GAGE10A6NGK3 116 aa19.6■□□□□ 0.73
HLA-C-208ENST00000487245 RNF223E7ERA6 249 aa19.6■□□□□ 0.73
HLA-C-208ENST00000487245 F6UB75 175 aa19.6■□□□□ 0.73
HLA-C-208ENST00000487245 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.6■□□□□ 0.73
HLA-C-208ENST00000487245 ELANEP08246 267 aa19.6■□□□□ 0.73
HLA-C-208ENST00000487245 IGHV4-31P0DP07 118 aa19.6■□□□□ 0.73
HLA-C-208ENST00000487245 DCANP1Q8TF63 244 aa19.6■□□□□ 0.73
HLA-C-208ENST00000487245 LRRC75A-AS1Q8N1F1 130 aa19.6■□□□□ 0.73
HLA-C-208ENST00000487245 JMJD8Q96S16 334 aa19.6■□□□□ 0.73
HLA-C-208ENST00000487245 CHAC1Q9BUX1 264 aa19.6■□□□□ 0.73
HLA-C-208ENST00000487245 RNASE3P12724 160 aaKnown RBP19.59■□□□□ 0.73
HLA-C-208ENST00000487245 DEFB1P60022 68 aa19.59■□□□□ 0.73
HLA-C-208ENST00000487245 TMEM160Q9NX00 188 aa19.59■□□□□ 0.73
HLA-C-208ENST00000487245 KLLNB2CW77 178 aa19.58■□□□□ 0.73
HLA-C-208ENST00000487245 TRBV25-1A0A075B6N4 114 aa19.58■□□□□ 0.72
HLA-C-208ENST00000487245 H7C1H1 209 aa19.58■□□□□ 0.72
HLA-C-208ENST00000487245 K7EP34 96 aa19.58■□□□□ 0.72
HLA-C-208ENST00000487245 MAPK1IP1LQ8NDC0 245 aa19.58■□□□□ 0.72
HLA-C-208ENST00000487245 GAGE12BA1L429 117 aa19.57■□□□□ 0.72
HLA-C-208ENST00000487245 H3BUT2 72 aa19.57■□□□□ 0.72
HLA-C-208ENST00000487245 SRD5A1P18405 259 aa19.57■□□□□ 0.72
HLA-C-208ENST00000487245 RPL32P62910 135 aaKnown RBP19.57■□□□□ 0.72
HLA-C-208ENST00000487245 C14orf178Q8N769 122 aaPredicted RBP19.57■□□□□ 0.72
HLA-C-208ENST00000487245 F8VRH5 84 aa19.56■□□□□ 0.72
HLA-C-208ENST00000487245 LGALS1P09382 135 aaKnown RBP19.56■□□□□ 0.72
HLA-C-208ENST00000487245 ODF3Q96PU9 254 aa19.56■□□□□ 0.72
HLA-C-208ENST00000487245 TM2D2Q9BX73 214 aa19.56■□□□□ 0.72
HLA-C-208ENST00000487245 LGALS9O00182 355 aa19.56■□□□□ 0.72
HLA-C-208ENST00000487245 SMIM13P0DJ93 91 aa19.56■□□□□ 0.72
HLA-C-208ENST00000487245 TAL2Q16559 108 aa19.56■□□□□ 0.72
HLA-C-208ENST00000487245 DEFB113Q30KQ7 82 aa19.56■□□□□ 0.72
HLA-C-208ENST00000487245 ZFYVE26Q68DK2 2539 aa19.55■□□□□ 0.72
HLA-C-208ENST00000487245 GNRH2O43555 120 aa19.55■□□□□ 0.72
HLA-C-208ENST00000487245 OCIAD2Q56VL3 154 aa19.55■□□□□ 0.72
HLA-C-208ENST00000487245 C10orf99Q6UWK7 81 aa19.54■□□□□ 0.72
HLA-C-208ENST00000487245 SCGB3A1Q96QR1 104 aa19.54■□□□□ 0.72
HLA-C-208ENST00000487245 TTTY13Q9BZ97 58 aa19.54■□□□□ 0.72
HLA-C-208ENST00000487245 ZNF702PQ9H963 129 aa19.54■□□□□ 0.72
HLA-C-208ENST00000487245 KIF25-AS1Q9Y6Z4 181 aa19.54■□□□□ 0.72
HLA-C-208ENST00000487245 EDN2P20800 178 aa19.54■□□□□ 0.72
HLA-C-208ENST00000487245 NEXN-AS1Q8NBZ9 246 aa19.54■□□□□ 0.72
HLA-C-208ENST00000487245 RPL39LQ96EH5 51 aaKnown RBP19.54■□□□□ 0.72
HLA-C-208ENST00000487245 A0A1W2PPM0 123 aa19.53■□□□□ 0.72
HLA-C-208ENST00000487245 SNRPD3P62318 126 aaKnown RBP19.53■□□□□ 0.72
HLA-C-208ENST00000487245 UBE2E2Q96LR5 201 aa19.53■□□□□ 0.72
HLA-C-208ENST00000487245 FLNCQ14315 2725 aa19.53■□□□□ 0.72
HLA-C-208ENST00000487245 IGHV4OR15-8A0A075B7B6 117 aa19.52■□□□□ 0.72
HLA-C-208ENST00000487245 A0A087WW49 117 aa19.52■□□□□ 0.72
HLA-C-208ENST00000487245 LINC01619G3V211 115 aa19.52■□□□□ 0.72
HLA-C-208ENST00000487245 FXYD2P54710 66 aa19.52■□□□□ 0.72
HLA-C-208ENST00000487245 RNF152Q8N8N0 203 aa19.52■□□□□ 0.72
HLA-C-208ENST00000487245 SVEP1Q4LDE5 3571 aa19.52■□□□□ 0.72
HLA-C-208ENST00000487245 GCSHP23434 173 aa19.52■□□□□ 0.71
HLA-C-208ENST00000487245 FAM159AQ6UWV7 190 aa19.52■□□□□ 0.71
HLA-C-208ENST00000487245 CEND1Q8N111 149 aa19.52■□□□□ 0.71
HLA-C-208ENST00000487245 CHTOPQ9Y3Y2 248 aaKnown RBP19.52■□□□□ 0.71
HLA-C-208ENST00000487245 MGPP08493 103 aa19.51■□□□□ 0.71
HLA-C-208ENST00000487245 LINC00315P59091 139 aa19.51■□□□□ 0.71
HLA-C-208ENST00000487245 OR5A1Q8NGJ0 315 aa19.51■□□□□ 0.71
HLA-C-208ENST00000487245 COL12A1Q99715 3063 aa19.51■□□□□ 0.71
HLA-C-208ENST00000487245 LINC01549A6NIU2 74 aa19.5■□□□□ 0.71
HLA-C-208ENST00000487245 SPRY2O43597 315 aa19.5■□□□□ 0.71
HLA-C-208ENST00000487245 MAPKAPK5-AS1Q8N8E1 139 aa19.5■□□□□ 0.71
HLA-C-208ENST00000487245 K7EQG2 157 aa19.5■□□□□ 0.71
HLA-C-208ENST00000487245 Q5PR19 223 aa19.5■□□□□ 0.71
HLA-C-208ENST00000487245 C2orf66Q6UXQ4 117 aa19.49■□□□□ 0.71
HLA-C-208ENST00000487245 RAB37Q96AX2 223 aa19.49■□□□□ 0.71
HLA-C-208ENST00000487245 SELENOKQ9Y6D0 94 aa19.49■□□□□ 0.71
HLA-C-208ENST00000487245 CSPG4Q6UVK1 2322 aa19.48■□□□□ 0.71
HLA-C-208ENST00000487245 HOXA3O43365 443 aaPredicted RBP19.48■□□□□ 0.71
HLA-C-208ENST00000487245 KRTAP10-9P60411 292 aa19.48■□□□□ 0.71
HLA-C-208ENST00000487245 PHLDA1Q8WV24 401 aaPredicted RBP19.48■□□□□ 0.71
HLA-C-208ENST00000487245 SYNJ2BPP57105 145 aa19.48■□□□□ 0.71
HLA-C-208ENST00000487245 A0A0J9YX75 114 aa19.47■□□□□ 0.71
HLA-C-208ENST00000487245 BAALCQ8WXS3 180 aa19.47■□□□□ 0.71
HLA-C-208ENST00000487245 ZNF688P0C7X2 276 aa19.46■□□□□ 0.71
HLA-C-208ENST00000487245 FABP2P12104 132 aa19.46■□□□□ 0.71
HLA-C-208ENST00000487245 CSTL1Q9H114 145 aa19.46■□□□□ 0.71
HLA-C-208ENST00000487245 K7ERU9 68 aa19.45■□□□□ 0.7
HLA-C-208ENST00000487245 DUSP14O95147 198 aaKnown RBP19.45■□□□□ 0.7
HLA-C-208ENST00000487245 SAMD5Q5TGI4 173 aa19.45■□□□□ 0.7
HLA-C-208ENST00000487245 SPCS1Q9Y6A9 102 aa19.45■□□□□ 0.7
HLA-C-208ENST00000487245 Q8N2B8 174 aa19.45■□□□□ 0.7
HLA-C-208ENST00000487245 CR1P17927 2039 aa19.45■□□□□ 0.7
HLA-C-208ENST00000487245 HOXD3P31249 432 aaPredicted RBP19.44■□□□□ 0.7
HLA-C-208ENST00000487245 NAA38Q9BRA0 125 aaKnown RBP19.44■□□□□ 0.7
HLA-C-208ENST00000487245 MYO18BQ8IUG5 2567 aa19.44■□□□□ 0.7
HLA-C-208ENST00000487245 MUC4Q99102 2169 aa19.44■□□□□ 0.7
HLA-C-208ENST00000487245 POLR2KP53803 58 aaKnown RBP19.43■□□□□ 0.7
HLA-C-208ENST00000487245 OR11H12B2RN74 326 aa19.43■□□□□ 0.7
HLA-C-208ENST00000487245 PCP4P48539 62 aa19.43■□□□□ 0.7
HLA-C-208ENST00000487245 OR11H1Q8NG94 326 aa19.43■□□□□ 0.7
HLA-C-208ENST00000487245 OR11H2Q8NH07 326 aa19.43■□□□□ 0.7
HLA-C-208ENST00000487245 TRAV12-3A0A0B4J271 114 aa19.42■□□□□ 0.7
HLA-C-208ENST00000487245 ANKRD17O75179 2603 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms