RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 SFTA3P0C7M3 94 aa13.7□□□□□ -0.22
PCOLCE-208ENST00000487172 ZFAND6Q6FIF0 208 aa13.7□□□□□ -0.22
PCOLCE-208ENST00000487172 OR2D3Q8NGH3 330 aa13.7□□□□□ -0.22
PCOLCE-208ENST00000487172 SSBP4Q9BWG4 385 aaPredicted RBP13.7□□□□□ -0.22
PCOLCE-208ENST00000487172 MUC4Q99102 2169 aa13.69□□□□□ -0.22
PCOLCE-208ENST00000487172 TRGV2A0A075B6R0 118 aa13.69□□□□□ -0.22
PCOLCE-208ENST00000487172 XKRY2A2RUG3 117 aa13.69□□□□□ -0.22
PCOLCE-208ENST00000487172 H3BVH4 76 aa13.69□□□□□ -0.22
PCOLCE-208ENST00000487172 RPL23P62829 140 aaKnown RBP13.69□□□□□ -0.22
PCOLCE-208ENST00000487172 RNASE7Q9H1E1 156 aaKnown RBP13.69□□□□□ -0.22
PCOLCE-208ENST00000487172 KLK5Q9Y337 293 aaPredicted RBP13.69□□□□□ -0.22
PCOLCE-208ENST00000487172 SNAI2O43623 268 aa13.68□□□□□ -0.22
PCOLCE-208ENST00000487172 ERVFC1-1P60608 527 aa13.68□□□□□ -0.22
PCOLCE-208ENST00000487172 ZNF876PQ49A33 203 aa13.68□□□□□ -0.22
PCOLCE-208ENST00000487172 COMMD7Q86VX2 200 aa13.68□□□□□ -0.22
PCOLCE-208ENST00000487172 OSTCQ9NRP0 149 aa13.68□□□□□ -0.22
PCOLCE-208ENST00000487172 OR5AL1P0C617 328 aa13.67□□□□□ -0.22
PCOLCE-208ENST00000487172 ISOC2Q96AB3 205 aa13.67□□□□□ -0.22
PCOLCE-208ENST00000487172 FAM210BQ96KR6 192 aa13.67□□□□□ -0.22
PCOLCE-208ENST00000487172 RPP21Q9H633 154 aaKnown RBP13.67□□□□□ -0.22
PCOLCE-208ENST00000487172 PHLDA3Q9Y5J5 127 aa13.67□□□□□ -0.22
PCOLCE-208ENST00000487172 GATCO43716 136 aaKnown RBP13.66□□□□□ -0.22
PCOLCE-208ENST00000487172 IGLC6P0CF74 106 aa13.66□□□□□ -0.22
PCOLCE-208ENST00000487172 TRAV4A0A0B4J268 109 aa13.65□□□□□ -0.22
PCOLCE-208ENST00000487172 HTN3P15516 51 aa13.65□□□□□ -0.22
PCOLCE-208ENST00000487172 CT83Q5H943 113 aa13.65□□□□□ -0.22
PCOLCE-208ENST00000487172 POM121L12Q8N7R1 296 aa13.65□□□□□ -0.22
PCOLCE-208ENST00000487172 SYT8Q8NBV8 401 aa13.65□□□□□ -0.22
PCOLCE-208ENST00000487172 A0A1W2PPQ1 181 aa13.64□□□□□ -0.23
PCOLCE-208ENST00000487172 TMEM218A2RU14 115 aa13.64□□□□□ -0.23
PCOLCE-208ENST00000487172 F5H768 121 aa13.64□□□□□ -0.23
PCOLCE-208ENST00000487172 RS1O15537 224 aa13.64□□□□□ -0.23
PCOLCE-208ENST00000487172 CIDEAO60543 219 aa13.64□□□□□ -0.23
PCOLCE-208ENST00000487172 GZMBP10144 247 aa13.64□□□□□ -0.23
PCOLCE-208ENST00000487172 TCTAP57738 103 aa13.64□□□□□ -0.23
PCOLCE-208ENST00000487172 ADIRFQ15847 76 aa13.64□□□□□ -0.23
PCOLCE-208ENST00000487172 DMRTA1Q5VZB9 504 aa13.64□□□□□ -0.23
PCOLCE-208ENST00000487172 ZFP82Q8N141 532 aa13.64□□□□□ -0.23
PCOLCE-208ENST00000487172 NXPH4O95158 308 aa13.63□□□□□ -0.23
PCOLCE-208ENST00000487172 HOXA5P20719 270 aa13.63□□□□□ -0.23
PCOLCE-208ENST00000487172 PNRC1Q12796 327 aaPredicted RBP13.63□□□□□ -0.23
PCOLCE-208ENST00000487172 C15orf54Q8N8G6 183 aa13.63□□□□□ -0.23
PCOLCE-208ENST00000487172 FER1L6-AS1Q8NA97 138 aa13.63□□□□□ -0.23
PCOLCE-208ENST00000487172 OR4C5Q8NGB2 326 aa13.63□□□□□ -0.23
PCOLCE-208ENST00000487172 SFRP2Q96HF1 295 aa13.63□□□□□ -0.23
PCOLCE-208ENST00000487172 A8MWL6 223 aa13.62□□□□□ -0.23
PCOLCE-208ENST00000487172 A8MWV9 139 aa13.62□□□□□ -0.23
PCOLCE-208ENST00000487172 F2Z2F3 143 aa13.62□□□□□ -0.23
PCOLCE-208ENST00000487172 SLAQ13239 276 aa13.62□□□□□ -0.23
PCOLCE-208ENST00000487172 CFAP126Q5VTH2 177 aa13.62□□□□□ -0.23
PCOLCE-208ENST00000487172 ZNF479Q96JC4 524 aa13.62□□□□□ -0.23
PCOLCE-208ENST00000487172 IGLL5B9A064 214 aa13.61□□□□□ -0.23
PCOLCE-208ENST00000487172 FOXA3P55318 350 aaPredicted RBP13.61□□□□□ -0.23
PCOLCE-208ENST00000487172 FHL2Q14192 279 aa13.61□□□□□ -0.23
PCOLCE-208ENST00000487172 OR10G8Q8NGN5 311 aa13.61□□□□□ -0.23
PCOLCE-208ENST00000487172 OR10AG1Q8NH19 301 aa13.61□□□□□ -0.23
PCOLCE-208ENST00000487172 V9GYV3 84 aa13.61□□□□□ -0.23
PCOLCE-208ENST00000487172 CSMD3Q7Z407 3707 aa13.6□□□□□ -0.23
PCOLCE-208ENST00000487172 IGHV4-4A0A075B6R2 117 aa13.6□□□□□ -0.23
PCOLCE-208ENST00000487172 FAM231BA6NCW3 169 aa13.6□□□□□ -0.23
PCOLCE-208ENST00000487172 M0R381 172 aa13.6□□□□□ -0.23
PCOLCE-208ENST00000487172 IGHV3-53P01767 116 aa13.6□□□□□ -0.23
PCOLCE-208ENST00000487172 WDR73Q6P4I2 378 aa13.6□□□□□ -0.23
PCOLCE-208ENST00000487172 SEC11CQ9BY50 192 aa13.6□□□□□ -0.23
PCOLCE-208ENST00000487172 GFRA4Q9GZZ7 299 aa13.6□□□□□ -0.23
PCOLCE-208ENST00000487172 F8W036 122 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 ADCYAP1P18509 176 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 CTRLP40313 264 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 CACNG7P62955 275 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 SPANXN1Q5VSR9 72 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 TMEM88Q6PEY1 159 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 LYZL1Q6UWQ5 148 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 ZFP2Q6ZN57 461 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 TSKUQ8WUA8 353 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 GTSF1Q8WW33 167 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 APLNQ9ULZ1 77 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 NACAE9PAV3 2078 aa13.59□□□□□ -0.23
PCOLCE-208ENST00000487172 H3BNG1 76 aa13.58□□□□□ -0.24
PCOLCE-208ENST00000487172 CNFNQ9BYD5 112 aa13.58□□□□□ -0.24
PCOLCE-208ENST00000487172 PRO0255Q9UI72 69 aa13.58□□□□□ -0.24
PCOLCE-208ENST00000487172 TRGV4A0A0C4DH28 118 aa13.57□□□□□ -0.24
PCOLCE-208ENST00000487172 CRYBA4P53673 196 aa13.57□□□□□ -0.24
PCOLCE-208ENST00000487172 UFSP1Q6NVU6 142 aa13.57□□□□□ -0.24
PCOLCE-208ENST00000487172 C15orf53Q8NAA6 179 aa13.57□□□□□ -0.24
PCOLCE-208ENST00000487172 TPPP3Q9BW30 176 aa13.57□□□□□ -0.24
PCOLCE-208ENST00000487172 JPT2Q9H910 190 aa13.57□□□□□ -0.24
PCOLCE-208ENST00000487172 HHLA3Q9XRX5 114 aa13.57□□□□□ -0.24
PCOLCE-208ENST00000487172 TRAV26-1A0A087WT03 109 aa13.56□□□□□ -0.24
PCOLCE-208ENST00000487172 CRYGDP07320 174 aa13.56□□□□□ -0.24
PCOLCE-208ENST00000487172 C10orf91Q5T1B1 145 aa13.56□□□□□ -0.24
PCOLCE-208ENST00000487172 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
PCOLCE-208ENST00000487172 MUC21A0A0G2JKD1 596 aa13.55□□□□□ -0.24
PCOLCE-208ENST00000487172 MUC21A0A140T8X8 626 aa13.55□□□□□ -0.24
PCOLCE-208ENST00000487172 RHODO00212 210 aa13.55□□□□□ -0.24
PCOLCE-208ENST00000487172 GATA1P15976 413 aaPredicted RBP13.55□□□□□ -0.24
PCOLCE-208ENST00000487172 VSIG2Q96IQ7 327 aa13.55□□□□□ -0.24
PCOLCE-208ENST00000487172 SAMD10Q9BYL1 202 aa13.55□□□□□ -0.24
PCOLCE-208ENST00000487172 STARD9Q9P2P6 4700 aa13.54□□□□□ -0.24
PCOLCE-208ENST00000487172 PPP1R2P9O14990 202 aa13.54□□□□□ -0.24
PCOLCE-208ENST00000487172 NTF3P20783 257 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms