RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PRSS1P07477 247 aa13.52□□□□□ -0.24
PDLIM7-207ENST00000486828 SMIM17P0DL12 118 aa13.52□□□□□ -0.24
PDLIM7-207ENST00000486828 KIR3DS1Q14943 382 aa13.52□□□□□ -0.24
PDLIM7-207ENST00000486828 C10orf99Q6UWK7 81 aa13.52□□□□□ -0.24
PDLIM7-207ENST00000486828 DPH3P1Q9H4G8 78 aa13.52□□□□□ -0.24
PDLIM7-207ENST00000486828 PSMG4Q5JS54 123 aa13.52□□□□□ -0.25
PDLIM7-207ENST00000486828 KLLNB2CW77 178 aa13.51□□□□□ -0.25
PDLIM7-207ENST00000486828 SPRY2O43597 315 aa13.51□□□□□ -0.25
PDLIM7-207ENST00000486828 RNASE3P12724 160 aaKnown RBP13.51□□□□□ -0.25
PDLIM7-207ENST00000486828 SMIM2Q9BVW6 85 aa13.51□□□□□ -0.25
PDLIM7-207ENST00000486828 SIVA1O15304 175 aa13.51□□□□□ -0.25
PDLIM7-207ENST00000486828 GNRH2O43555 120 aa13.51□□□□□ -0.25
PDLIM7-207ENST00000486828 CDKN1BP46527 198 aa13.51□□□□□ -0.25
PDLIM7-207ENST00000486828 UBE2V1Q13404 147 aa13.51□□□□□ -0.25
PDLIM7-207ENST00000486828 MAPK1IP1LQ8NDC0 245 aa13.51□□□□□ -0.25
PDLIM7-207ENST00000486828 OR9G4Q8NGQ1 327 aa13.51□□□□□ -0.25
PDLIM7-207ENST00000486828 FOXC2Q99958 501 aa13.51□□□□□ -0.25
PDLIM7-207ENST00000486828 SETXQ7Z333 2677 aaKnown RBP13.5□□□□□ -0.25
PDLIM7-207ENST00000486828 CELSR1Q9NYQ6 3014 aa13.5□□□□□ -0.25
PDLIM7-207ENST00000486828 CCL25O15444 150 aa13.5□□□□□ -0.25
PDLIM7-207ENST00000486828 PTTG1IPP53801 180 aa13.5□□□□□ -0.25
PDLIM7-207ENST00000486828 TCTAP57738 103 aa13.5□□□□□ -0.25
PDLIM7-207ENST00000486828 TMEM97Q5BJF2 176 aa13.5□□□□□ -0.25
PDLIM7-207ENST00000486828 MYOZ3Q8TDC0 251 aa13.5□□□□□ -0.25
PDLIM7-207ENST00000486828 FSHBP01225 129 aa13.49□□□□□ -0.25
PDLIM7-207ENST00000486828 IGKCP01834 107 aa13.49□□□□□ -0.25
PDLIM7-207ENST00000486828 RBX1P62877 108 aa13.49□□□□□ -0.25
PDLIM7-207ENST00000486828 C14orf178Q8N769 122 aaPredicted RBP13.49□□□□□ -0.25
PDLIM7-207ENST00000486828 RASL10AQ92737 203 aa13.49□□□□□ -0.25
PDLIM7-207ENST00000486828 C20orf78Q9BR46 151 aa13.49□□□□□ -0.25
PDLIM7-207ENST00000486828 VPREB3Q9UKI3 123 aa13.49□□□□□ -0.25
PDLIM7-207ENST00000486828 HHLA3Q9XRX5 114 aa13.49□□□□□ -0.25
PDLIM7-207ENST00000486828 NMUP48645 174 aa13.49□□□□□ -0.25
PDLIM7-207ENST00000486828 PDZD2O15018 2839 aa13.48□□□□□ -0.25
PDLIM7-207ENST00000486828 NXPH4O95158 308 aa13.48□□□□□ -0.25
PDLIM7-207ENST00000486828 SUMO2P61956 95 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-207ENST00000486828 SEC11AP67812 179 aa13.48□□□□□ -0.25
PDLIM7-207ENST00000486828 AP1S3Q96PC3 154 aa13.48□□□□□ -0.25
PDLIM7-207ENST00000486828 DPM2O94777 84 aa13.47□□□□□ -0.25
PDLIM7-207ENST00000486828 PCP2Q8IVA1 136 aa13.47□□□□□ -0.25
PDLIM7-207ENST00000486828 RNF223E7ERA6 249 aa13.47□□□□□ -0.25
PDLIM7-207ENST00000486828 ORMDL2Q53FV1 153 aa13.47□□□□□ -0.25
PDLIM7-207ENST00000486828 Q6YL49 198 aa13.47□□□□□ -0.25
PDLIM7-207ENST00000486828 BEX4Q9NWD9 120 aaPredicted RBP13.47□□□□□ -0.25
PDLIM7-207ENST00000486828 K7EMI3 77 aa13.46□□□□□ -0.25
PDLIM7-207ENST00000486828 MGPP08493 103 aa13.46□□□□□ -0.25
PDLIM7-207ENST00000486828 IGHV4-31P0DP07 118 aa13.46□□□□□ -0.25
PDLIM7-207ENST00000486828 DEFB113Q30KQ7 82 aa13.46□□□□□ -0.25
PDLIM7-207ENST00000486828 FAM159AQ6UWV7 190 aa13.46□□□□□ -0.25
PDLIM7-207ENST00000486828 POM121L12Q8N7R1 296 aa13.46□□□□□ -0.25
PDLIM7-207ENST00000486828 C7orf71A4D174 169 aa13.45□□□□□ -0.26
PDLIM7-207ENST00000486828 ELANEP08246 267 aa13.45□□□□□ -0.26
PDLIM7-207ENST00000486828 LGALS1P09382 135 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-207ENST00000486828 HSD52Q0P140 79 aa13.45□□□□□ -0.26
PDLIM7-207ENST00000486828 ADAMTSL5Q6ZMM2 481 aa13.45□□□□□ -0.26
PDLIM7-207ENST00000486828 RPL39LQ96EH5 51 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-207ENST00000486828 ODF3Q96PU9 254 aa13.45□□□□□ -0.26
PDLIM7-207ENST00000486828 VAMP3Q15836 100 aa13.45□□□□□ -0.26
PDLIM7-207ENST00000486828 ZNF702PQ9H963 129 aa13.45□□□□□ -0.26
PDLIM7-207ENST00000486828 A0A087WX48 190 aa13.44□□□□□ -0.26
PDLIM7-207ENST00000486828 IGKV2D-26A0A0A0MRZ7 120 aa13.44□□□□□ -0.26
PDLIM7-207ENST00000486828 CBY3A6NI87 242 aa13.44□□□□□ -0.26
PDLIM7-207ENST00000486828 LGALS9O00182 355 aa13.44□□□□□ -0.26
PDLIM7-207ENST00000486828 PPP1R17O96001 155 aa13.44□□□□□ -0.26
PDLIM7-207ENST00000486828 ZNF688P0C7X2 276 aa13.44□□□□□ -0.26
PDLIM7-207ENST00000486828 SNRPD3P62318 126 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-207ENST00000486828 MRPL35Q9NZE8 188 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-207ENST00000486828 CREBBPQ92793 2442 aa13.44□□□□□ -0.26
PDLIM7-207ENST00000486828 CSPG4Q6UVK1 2322 aa13.44□□□□□ -0.26
PDLIM7-207ENST00000486828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.43□□□□□ -0.26
PDLIM7-207ENST00000486828 K7EQG2 157 aa13.43□□□□□ -0.26
PDLIM7-207ENST00000486828 TOMM6Q96B49 74 aa13.43□□□□□ -0.26
PDLIM7-207ENST00000486828 KIF25-AS1Q9Y6Z4 181 aa13.43□□□□□ -0.26
PDLIM7-207ENST00000486828 A0A0J9YX75 114 aa13.43□□□□□ -0.26
PDLIM7-207ENST00000486828 SYNJ2BPP57105 145 aa13.43□□□□□ -0.26
PDLIM7-207ENST00000486828 ZC2HC1BQ5TFG8 222 aa13.43□□□□□ -0.26
PDLIM7-207ENST00000486828 ERASQ7Z444 233 aa13.43□□□□□ -0.26
PDLIM7-207ENST00000486828 LRRC75A-AS1Q8N1F1 130 aa13.43□□□□□ -0.26
PDLIM7-207ENST00000486828 WFDC12Q8WWY7 111 aa13.43□□□□□ -0.26
PDLIM7-207ENST00000486828 IGHV4OR15-8A0A075B7B6 117 aa13.42□□□□□ -0.26
PDLIM7-207ENST00000486828 A0A087WW49 117 aa13.42□□□□□ -0.26
PDLIM7-207ENST00000486828 TRAV12-3A0A0B4J271 114 aa13.42□□□□□ -0.26
PDLIM7-207ENST00000486828 CYSRT1A8MQ03 144 aa13.42□□□□□ -0.26
PDLIM7-207ENST00000486828 UBE2E2Q96LR5 201 aa13.42□□□□□ -0.26
PDLIM7-207ENST00000486828 TMEM160Q9NX00 188 aa13.42□□□□□ -0.26
PDLIM7-207ENST00000486828 TRAV12-1A0A0B4J245 112 aa13.41□□□□□ -0.26
PDLIM7-207ENST00000486828 HLA-DRB4P13762 266 aa13.41□□□□□ -0.26
PDLIM7-207ENST00000486828 LINC00315P59091 139 aa13.41□□□□□ -0.26
PDLIM7-207ENST00000486828 GTSCR1Q86UQ5 136 aa13.41□□□□□ -0.26
PDLIM7-207ENST00000486828 HLA-DRB4X5D2U9 266 aa13.41□□□□□ -0.26
PDLIM7-207ENST00000486828 A6NDN8 102 aa13.41□□□□□ -0.26
PDLIM7-207ENST00000486828 HOXA3O43365 443 aaPredicted RBP13.41□□□□□ -0.26
PDLIM7-207ENST00000486828 CD7P09564 240 aa13.41□□□□□ -0.26
PDLIM7-207ENST00000486828 RNF152Q8N8N0 203 aa13.41□□□□□ -0.26
PDLIM7-207ENST00000486828 PLNP26678 52 aa13.4□□□□□ -0.26
PDLIM7-207ENST00000486828 HOXD3P31249 432 aaPredicted RBP13.4□□□□□ -0.26
PDLIM7-207ENST00000486828 SCGB3A1Q96QR1 104 aa13.4□□□□□ -0.26
PDLIM7-207ENST00000486828 HIGD1BQ9P298 99 aa13.4□□□□□ -0.26
PDLIM7-207ENST00000486828 PRRC2AP48634 2157 aaKnown RBP13.4□□□□□ -0.27
PDLIM7-207ENST00000486828 ITPR3Q14573 2671 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms