RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	NTF3	P20783	257 aa		6.66	□□□□□ -1.34
KIFC1-213	ENST00000486695	TDRG1	Q3Y452	100 aa		6.66	□□□□□ -1.34
KIFC1-213	ENST00000486695	SPANXN1	Q5VSR9	72 aa		6.66	□□□□□ -1.34
KIFC1-213	ENST00000486695	MORN3	Q6PF18	240 aa	Predicted RBP	6.66	□□□□□ -1.34
KIFC1-213	ENST00000486695	ZNF575	Q86XF7	245 aa		6.66	□□□□□ -1.34
KIFC1-213	ENST00000486695	GATD1	Q8NB37	220 aa		6.66	□□□□□ -1.34
KIFC1-213	ENST00000486695	CNFN	Q9BYD5	112 aa		6.66	□□□□□ -1.34
KIFC1-213	ENST00000486695	PHLDA3	Q9Y5J5	127 aa		6.66	□□□□□ -1.34
KIFC1-213	ENST00000486695	AGRN	O00468	2067 aa		6.65	□□□□□ -1.34
KIFC1-213	ENST00000486695	CBY3	A6NI87	242 aa		6.65	□□□□□ -1.34
KIFC1-213	ENST00000486695	CRX	O43186	299 aa	Predicted RBP	6.65	□□□□□ -1.34
KIFC1-213	ENST00000486695	SNRPE	P62304	92 aa	Known RBP	6.65	□□□□□ -1.34
KIFC1-213	ENST00000486695	ZNF493	Q6ZR52	646 aa		6.65	□□□□□ -1.34
KIFC1-213	ENST00000486695	LINC01587	Q99440	93 aa		6.65	□□□□□ -1.34
KIFC1-213	ENST00000486695	TMEM208	Q9BTX3	173 aa		6.65	□□□□□ -1.34
KIFC1-213	ENST00000486695	C1QTNF4	Q9BXJ3	329 aa		6.65	□□□□□ -1.34
KIFC1-213	ENST00000486695	C19orf73	Q9NVV2	129 aa		6.65	□□□□□ -1.34
KIFC1-213	ENST00000486695	IGHV4-4	A0A075B6R2	117 aa		6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	RPL35A	P18077	110 aa	Known RBP	6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	SLA	Q13239	276 aa		6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	KIAA1644	Q3SXP7	199 aa		6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	TMEM256	Q8N2U0	113 aa		6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	SYT8	Q8NBV8	401 aa		6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	OR10AG1	Q8NH19	301 aa		6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	LINC00467	Q9BRT7	94 aa		6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	TMEM191A	Q9H0A3	160 aa		6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	XCL2	Q9UBD3	114 aa		6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	ZMAT5	Q9UDW3	170 aa	Known RBP	6.64	□□□□□ -1.35
KIFC1-213	ENST00000486695	IGHV3-16	A0A0C4DH30	117 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	C5orf52	A6NGY3	159 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695		M0R381	172 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	HTN1	P15515	57 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	SRI	P30626	198 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	PRR31	Q5SQ13	230 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	FAM104B	Q5XKR9	115 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	MEGF8	Q7Z7M0	2845 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695		Q8N1Y9	231 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	DEFB125	Q8N687	156 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	SORL1	Q92673	2214 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	WFDC10A	Q9H1F0	79 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	SCRT2	Q9NQ03	307 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	MSRB1	Q9NZV6	116 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	GOLT1B	Q9Y3E0	138 aa		6.63	□□□□□ -1.35
KIFC1-213	ENST00000486695	TRRAP	Q9Y4A5	3859 aa		6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	LOC105371267	A0A1B0GV96	52 aa		6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	RBMY1A1	P0DJD3	496 aa	Known RBP	6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	RBMY1C	P0DJD4	496 aa		6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	RNASE3	P12724	160 aa	Known RBP	6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	HOXA5	P20719	270 aa		6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	ZNF415	Q09FC8	603 aa		6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695		Q0VG73	95 aa		6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	RBMY1F	Q15415	496 aa	Known RBP	6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	OR10J3	Q5JRS4	329 aa		6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	BAGE3	Q86Y29	109 aa		6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	MDFIC	Q9P1T7	246 aa		6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	TP53TG3	Q9ULZ0	132 aa		6.62	□□□□□ -1.35
KIFC1-213	ENST00000486695	PKD1L1	Q8TDX9	2849 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	IGHV3OR16-12	A0A075B7B8	117 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	UBE2C	O00762	179 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	LCE2B	O14633	110 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	PPBP	P02775	128 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	SMIM17	P0DL12	118 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	S100A2	P29034	98 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	CKS2	P33552	79 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	COA6	Q5JTJ3	125 aa	Known RBP	6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	AMN1	Q8IY45	258 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	C9orf85	Q96MD7	179 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	AP1S3	Q96PC3	154 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	CSTL1	Q9H114	145 aa		6.61	□□□□□ -1.35
KIFC1-213	ENST00000486695	RAB4A	P20338	218 aa		6.6	□□□□□ -1.35
KIFC1-213	ENST00000486695	EVI2A	P22794	236 aa		6.6	□□□□□ -1.35
KIFC1-213	ENST00000486695	MRPL51	Q4U2R6	128 aa	Known RBP	6.6	□□□□□ -1.35
KIFC1-213	ENST00000486695	ORMDL3	Q8N138	153 aa		6.6	□□□□□ -1.35
KIFC1-213	ENST00000486695	C1orf158	Q8N1D5	194 aa		6.6	□□□□□ -1.35
KIFC1-213	ENST00000486695	SPX	Q9BT56	116 aa		6.6	□□□□□ -1.35
KIFC1-213	ENST00000486695	DPH3P1	Q9H4G8	78 aa		6.6	□□□□□ -1.35
KIFC1-213	ENST00000486695	CMYA5	Q8N3K9	4069 aa		6.6	□□□□□ -1.35
KIFC1-213	ENST00000486695		D6R8Y8	96 aa		6.59	□□□□□ -1.35
KIFC1-213	ENST00000486695	SPRY2	O43597	315 aa		6.59	□□□□□ -1.35
KIFC1-213	ENST00000486695	NXPH4	O95158	308 aa		6.59	□□□□□ -1.35
KIFC1-213	ENST00000486695	APOC4	P55056	127 aa		6.59	□□□□□ -1.35
KIFC1-213	ENST00000486695	C14orf178	Q8N769	122 aa	Predicted RBP	6.59	□□□□□ -1.35
KIFC1-213	ENST00000486695	C18orf32	Q8TCD1	76 aa		6.59	□□□□□ -1.35
KIFC1-213	ENST00000486695	RNF185	Q96GF1	192 aa		6.59	□□□□□ -1.35
KIFC1-213	ENST00000486695	PRELID3A	Q96N28	172 aa		6.59	□□□□□ -1.35
KIFC1-213	ENST00000486695	RCHY1	Q96PM5	261 aa		6.59	□□□□□ -1.35
KIFC1-213	ENST00000486695		U3KQK5	164 aa		6.59	□□□□□ -1.35
KIFC1-213	ENST00000486695	KIR2DL5B	A0A0G2JN68	375 aa		6.58	□□□□□ -1.36
KIFC1-213	ENST00000486695	KIR2DL5B	A0A0G2JPC4	375 aa		6.58	□□□□□ -1.36
KIFC1-213	ENST00000486695		M0R2P5	195 aa		6.58	□□□□□ -1.36
KIFC1-213	ENST00000486695	MGP	P08493	103 aa		6.58	□□□□□ -1.36
KIFC1-213	ENST00000486695	IQCJ	Q1A5X6	159 aa		6.58	□□□□□ -1.36
KIFC1-213	ENST00000486695	ZNF876P	Q49A33	203 aa		6.58	□□□□□ -1.36
KIFC1-213	ENST00000486695	PDZD11	Q5EBL8	140 aa		6.58	□□□□□ -1.36
KIFC1-213	ENST00000486695	KIR2DL5A	Q8N109	375 aa		6.58	□□□□□ -1.36
KIFC1-213	ENST00000486695	HIST3H2BB	Q8N257	126 aa		6.58	□□□□□ -1.36
KIFC1-213	ENST00000486695	KIR2DL5B	Q8NHK3	375 aa		6.58	□□□□□ -1.36
KIFC1-213	ENST00000486695	PTH2	Q96A98	100 aa		6.58	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms