RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 KCNIP4Q6PIL6 250 aa9.27□□□□□ -0.93
U2AF1-211ENST00000486519 CLRN3Q8NCR9 226 aa9.27□□□□□ -0.93
U2AF1-211ENST00000486519 OR10G7Q8NGN6 311 aa9.27□□□□□ -0.93
U2AF1-211ENST00000486519 OR2G3Q8NGZ4 309 aa9.27□□□□□ -0.93
U2AF1-211ENST00000486519 BCL7BQ9BQE9 202 aa9.27□□□□□ -0.93
U2AF1-211ENST00000486519 NAA50Q9GZZ1 169 aaKnown RBP9.27□□□□□ -0.93
U2AF1-211ENST00000486519 VCX3BQ9H321 246 aa9.27□□□□□ -0.93
U2AF1-211ENST00000486519 IGLV10-54A0A075B6I4 117 aa9.26□□□□□ -0.93
U2AF1-211ENST00000486519 PIGBOS1A0A0B4J2F0 54 aa9.26□□□□□ -0.93
U2AF1-211ENST00000486519 UBE2L5PA0A1B0GUS4 154 aa9.26□□□□□ -0.93
U2AF1-211ENST00000486519 CCSO14618 274 aa9.26□□□□□ -0.93
U2AF1-211ENST00000486519 FGF8P55075 233 aaPredicted RBP9.26□□□□□ -0.93
U2AF1-211ENST00000486519 MIAQ16674 131 aa9.26□□□□□ -0.93
U2AF1-211ENST00000486519 ZFP2Q6ZN57 461 aa9.26□□□□□ -0.93
U2AF1-211ENST00000486519 PTH2Q96A98 100 aa9.26□□□□□ -0.93
U2AF1-211ENST00000486519 KCNS1Q96KK3 526 aa9.26□□□□□ -0.93
U2AF1-211ENST00000486519 PRR34Q9NV39 138 aa9.26□□□□□ -0.93
U2AF1-211ENST00000486519 TRAV26-2A0A0B4J265 109 aa9.25□□□□□ -0.93
U2AF1-211ENST00000486519 CST7O76096 145 aa9.25□□□□□ -0.93
U2AF1-211ENST00000486519 MBPP02686 304 aaPredicted RBP9.25□□□□□ -0.93
U2AF1-211ENST00000486519 CSN1S1P47710 185 aa9.25□□□□□ -0.93
U2AF1-211ENST00000486519 TAS2R30P59541 319 aa9.24□□□□□ -0.93
U2AF1-211ENST00000486519 IL18Q14116 193 aa9.24□□□□□ -0.93
U2AF1-211ENST00000486519 HYLS1Q96M11 299 aa9.24□□□□□ -0.93
U2AF1-211ENST00000486519 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
U2AF1-211ENST00000486519 A0A096LNI7 61 aa9.23□□□□□ -0.93
U2AF1-211ENST00000486519 RGS5O15539 181 aa9.23□□□□□ -0.93
U2AF1-211ENST00000486519 BAXQ07812 192 aa9.23□□□□□ -0.93
U2AF1-211ENST00000486519 LGALSLQ3ZCW2 172 aaPredicted RBP9.23□□□□□ -0.93
U2AF1-211ENST00000486519 LINC00269Q8N2A0 174 aa9.23□□□□□ -0.93
U2AF1-211ENST00000486519 DYNC2LI1Q8TCX1 351 aa9.23□□□□□ -0.93
U2AF1-211ENST00000486519 CHAC2Q8WUX2 184 aa9.23□□□□□ -0.93
U2AF1-211ENST00000486519 TMED6Q8WW62 240 aa9.23□□□□□ -0.93
U2AF1-211ENST00000486519 AP3S1Q92572 193 aa9.23□□□□□ -0.93
U2AF1-211ENST00000486519 SGK494Q96LW2 274 aa9.23□□□□□ -0.93
U2AF1-211ENST00000486519 TREM1Q9NP99 234 aa9.23□□□□□ -0.93
U2AF1-211ENST00000486519 UQCC1Q9NVA1 299 aa9.23□□□□□ -0.93
U2AF1-211ENST00000486519 EIF3GO75821 320 aaKnown RBP eCLIP9.22□□□□□ -0.93
U2AF1-211ENST00000486519 UBE2D3P61077 147 aa9.22□□□□□ -0.93
U2AF1-211ENST00000486519 UBE2D2P62837 147 aa9.22□□□□□ -0.93
U2AF1-211ENST00000486519 CACNG7P62955 275 aa9.22□□□□□ -0.93
U2AF1-211ENST00000486519 Q6ZRP5 223 aa9.22□□□□□ -0.93
U2AF1-211ENST00000486519 TRBV6-8A0A0A6YYG3 113 aa9.21□□□□□ -0.94
U2AF1-211ENST00000486519 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.21□□□□□ -0.94
U2AF1-211ENST00000486519 A8MWV9 139 aa9.21□□□□□ -0.94
U2AF1-211ENST00000486519 SMIM18P0DKX4 95 aa9.21□□□□□ -0.94
U2AF1-211ENST00000486519 FGF7P21781 194 aa9.21□□□□□ -0.94
U2AF1-211ENST00000486519 GOLT1AQ6ZVE7 132 aa9.21□□□□□ -0.94
U2AF1-211ENST00000486519 ZNF664Q8N3J9 261 aa9.21□□□□□ -0.94
U2AF1-211ENST00000486519 MCFD2Q8NI22 146 aa9.21□□□□□ -0.94
U2AF1-211ENST00000486519 GFRA4Q9GZZ7 299 aa9.21□□□□□ -0.94
U2AF1-211ENST00000486519 AP5S1Q9NUS5 200 aa9.21□□□□□ -0.94
U2AF1-211ENST00000486519 C9orf170A2RU37 121 aa9.2□□□□□ -0.94
U2AF1-211ENST00000486519 NDUFS6O75380 124 aaKnown RBP9.2□□□□□ -0.94
U2AF1-211ENST00000486519 GNG5P63218 68 aa9.2□□□□□ -0.94
U2AF1-211ENST00000486519 IAH1Q2TAA2 248 aaPredicted RBP9.2□□□□□ -0.94
U2AF1-211ENST00000486519 DIRAS2Q96HU8 199 aa9.2□□□□□ -0.94
U2AF1-211ENST00000486519 C11orf1Q9H5F2 150 aa9.2□□□□□ -0.94
U2AF1-211ENST00000486519 RAB5CP51148 216 aa9.19□□□□□ -0.94
U2AF1-211ENST00000486519 RBX1P62877 108 aa9.19□□□□□ -0.94
U2AF1-211ENST00000486519 CTF1Q16619 201 aa9.19□□□□□ -0.94
U2AF1-211ENST00000486519 FAM74A4Q5TZK3 123 aa9.19□□□□□ -0.94
U2AF1-211ENST00000486519 C15orf56Q8N910 161 aa9.19□□□□□ -0.94
U2AF1-211ENST00000486519 GSKIPQ9P0R6 139 aa9.19□□□□□ -0.94
U2AF1-211ENST00000486519 PTTG1O95997 202 aa9.18□□□□□ -0.94
U2AF1-211ENST00000486519 NTM-AS1Q6ZSK4 140 aa9.18□□□□□ -0.94
U2AF1-211ENST00000486519 CHCHD5Q9BSY4 110 aa9.18□□□□□ -0.94
U2AF1-211ENST00000486519 OR7C2O60412 319 aa9.17□□□□□ -0.94
U2AF1-211ENST00000486519 BCAP31P51572 246 aa9.17□□□□□ -0.94
U2AF1-211ENST00000486519 NMES1Q9C002 83 aa9.17□□□□□ -0.94
U2AF1-211ENST00000486519 SLIRPQ9GZT3 109 aaKnown RBP9.17□□□□□ -0.94
U2AF1-211ENST00000486519 IGKV3D-20A0A0C4DH25 116 aa9.16□□□□□ -0.94
U2AF1-211ENST00000486519 IGSF23A1L1A6 192 aa9.16□□□□□ -0.94
U2AF1-211ENST00000486519 KRTAP9-7A8MTY7 169 aa9.16□□□□□ -0.94
U2AF1-211ENST00000486519 UBE2L3P68036 154 aaKnown RBP9.16□□□□□ -0.94
U2AF1-211ENST00000486519 GAGE6Q13070 117 aa9.16□□□□□ -0.94
U2AF1-211ENST00000486519 HIGD2BQ4VC39 106 aa9.16□□□□□ -0.94
U2AF1-211ENST00000486519 INO80EQ8NBZ0 244 aaPredicted RBP9.16□□□□□ -0.94
U2AF1-211ENST00000486519 TRIM63Q969Q1 353 aa9.16□□□□□ -0.94
U2AF1-211ENST00000486519 NPCDR1Q9BY65 106 aa9.16□□□□□ -0.94
U2AF1-211ENST00000486519 RABL2AQ9UBK7 228 aaPredicted RBP9.16□□□□□ -0.94
U2AF1-211ENST00000486519 TRBV7-3A0A075B6L6 115 aa9.15□□□□□ -0.94
U2AF1-211ENST00000486519 ATP6V1G2O95670 118 aa9.15□□□□□ -0.94
U2AF1-211ENST00000486519 GCGP01275 180 aa9.15□□□□□ -0.94
U2AF1-211ENST00000486519 FLVCR2Q9UPI3 526 aa9.15□□□□□ -0.94
U2AF1-211ENST00000486519 LSM5Q9Y4Y9 91 aaKnown RBP9.15□□□□□ -0.94
U2AF1-211ENST00000486519 RPS10P46783 165 aaKnown RBP9.14□□□□□ -0.95
U2AF1-211ENST00000486519 RPL36AP83881 106 aaKnown RBP9.14□□□□□ -0.95
U2AF1-211ENST00000486519 REG3AQ06141 175 aa9.14□□□□□ -0.95
U2AF1-211ENST00000486519 SPANXN2Q5MJ10 180 aa9.14□□□□□ -0.95
U2AF1-211ENST00000486519 THAP6Q8TBB0 222 aa9.14□□□□□ -0.95
U2AF1-211ENST00000486519 RPL36ALQ969Q0 106 aaKnown RBP9.14□□□□□ -0.95
U2AF1-211ENST00000486519 Q9H521 79 aa9.14□□□□□ -0.95
U2AF1-211ENST00000486519 L7N2F9 121 aa9.13□□□□□ -0.95
U2AF1-211ENST00000486519 IFNA7P01567 189 aa9.13□□□□□ -0.95
U2AF1-211ENST00000486519 VAMP2P63027 116 aa9.13□□□□□ -0.95
U2AF1-211ENST00000486519 SLC25A21Q9BQT8 299 aaPredicted RBP9.13□□□□□ -0.95
U2AF1-211ENST00000486519 H3BVH4 76 aa9.12□□□□□ -0.95
U2AF1-211ENST00000486519 S100A10P60903 97 aa9.12□□□□□ -0.95
U2AF1-211ENST00000486519 PIK3CD-AS1Q5SR53 167 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms