RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 IGHV3-23P01764 117 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 IGHG2P01859 326 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 TRGV3P03979 118 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 HIST1H1AQ02539 215 aaPredicted RBP3.41□□□□□ -1.86
SPTA1-207ENST00000485680 SLAQ13239 276 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 TMEM78Q5T7P6 136 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 LCN12Q6JVE5 192 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 CLEC19AQ6UXS0 136 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 TCF24Q7RTU0 167 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 ZNF664Q8N3J9 261 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 GATD1Q8NB37 220 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 C18orf32Q8TCD1 76 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 ZC2HC1AQ96GY0 325 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 VAMP8Q9BV40 100 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 HSPB8Q9UJY1 196 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 LENEPQ9Y5L5 61 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 NOTCH2Q04721 2471 aa3.41□□□□□ -1.86
SPTA1-207ENST00000485680 ATMQ13315 3056 aa3.4□□□□□ -1.86
SPTA1-207ENST00000485680 SPENQ96T58 3664 aaKnown RBP3.4□□□□□ -1.86
SPTA1-207ENST00000485680 LOC102724200A0A096LPH7 203 aaPredicted RBP3.4□□□□□ -1.87
SPTA1-207ENST00000485680 TRAV8-1A0A0A6YYK1 113 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 A6NDX4 124 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 OVOL1O14753 267 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 NUPR1O60356 82 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 PPBPP02775 128 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 LINC00614P0C842 121 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 KRTDAPP60985 99 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 RNASEKQ6P5S7 137 aaKnown RBP3.4□□□□□ -1.87
SPTA1-207ENST00000485680 LINC00322Q6ZN03 302 aaPredicted RBP3.4□□□□□ -1.87
SPTA1-207ENST00000485680 TEX43Q6ZNM6 134 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 ZNF493Q6ZR52 646 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 SMIM15Q7Z3B0 74 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 NIT1Q86X76 327 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 LINC00477Q96M19 166 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 C20orf144Q9BQM9 153 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 PRO1933Q9H354 126 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 TP53TG3Q9ULZ0 132 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 S4R3C0 116 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 ABCA4P78363 2273 aa3.4□□□□□ -1.87
SPTA1-207ENST00000485680 TPRP12270 2363 aaKnown RBP3.39□□□□□ -1.87
SPTA1-207ENST00000485680 IGHV3-35A0A0C4DH35 117 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 KIR2DL5BA0A0G2JN68 375 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 KIR2DL5BA0A0G2JPC4 375 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 HSBP1L1C9JCN9 74 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 G3V318 75 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 H3BUX3 64 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 K7EMT4 169 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 M0R143 59 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 M0R3E3 92 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 SH2D1AO60880 128 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 LEPROTL1O95214 131 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 ORM1P02763 201 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 GIG44P09565 113 aaPredicted RBP3.39□□□□□ -1.87
SPTA1-207ENST00000485680 NTF3P20783 257 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 ZNF138P52744 262 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 CACNG7P62955 275 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 LOXL1Q08397 574 aaPredicted RBP3.39□□□□□ -1.87
SPTA1-207ENST00000485680 PSMG4Q5JS54 123 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 GDF5OSQ5U4N7 250 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 BRD3OSQ6XYD6 125 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 FA2HQ7L5A8 372 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 KIR2DL5AQ8N109 375 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 ORMDL3Q8N138 153 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 LRRC75A-AS1Q8N1F1 130 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 FER1L6-AS1Q8NA97 138 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 OR10J6PQ8NGY7 276 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 PIFOQ8TCI5 191 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 C14orf144Q96I85 54 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 MIEN1Q9BRT3 115 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 TMEM70Q9BUB7 260 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 MAP1LC3CQ9BXW4 147 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 LAMTOR2Q9Y2Q5 125 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 UFC1Q9Y3C8 167 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 SMAD5-AS1Q9Y6J3 95 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 ADGRG4Q8IZF6 3080 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 NBEAQ8NFP9 2946 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 LAMA5O15230 3695 aa3.39□□□□□ -1.87
SPTA1-207ENST00000485680 IGF2RP11717 2491 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 IGKV2-40A0A087WW87 121 aaPredicted RBP3.38□□□□□ -1.87
SPTA1-207ENST00000485680 A0A1B0GUS0 222 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 CLPSL1A2RUU4 121 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 DUSP14O95147 198 aaKnown RBP3.38□□□□□ -1.87
SPTA1-207ENST00000485680 IGKV2D-40P01614 121 aaPredicted RBP3.38□□□□□ -1.87
SPTA1-207ENST00000485680 ARMS2P0C7Q2 107 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 C3orf79P0CE67 100 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 CTRLP40313 264 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 CRIP1P50238 77 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 LY6EQ16553 131 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 FAM104BQ5XKR9 115 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 LYZL1Q6UWQ5 148 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 OR4X2Q8NGF9 303 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 OR10AG1Q8NH19 301 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 C2orf88Q9BSF0 95 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 TPPP3Q9BW30 176 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 CNFNQ9BYD5 112 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 TMEM191AQ9H0A3 160 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 PEF1Q9UBV8 284 aaKnown RBP3.38□□□□□ -1.87
SPTA1-207ENST00000485680 UQCR10Q9UDW1 63 aa3.38□□□□□ -1.87
SPTA1-207ENST00000485680 Q9UF83 564 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms