RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 C11orf21Q9P2W6 132 aa11.56□□□□□ -0.56
SMC4-216ENST00000485645 TRAV8-6A0A0B4J262 113 aa11.55□□□□□ -0.56
SMC4-216ENST00000485645 KRTAP10-1P60331 282 aa11.55□□□□□ -0.56
SMC4-216ENST00000485645 FLI1Q01543 452 aaPredicted RBP11.55□□□□□ -0.56
SMC4-216ENST00000485645 RHOHQ15669 191 aa11.55□□□□□ -0.56
SMC4-216ENST00000485645 ZFP69Q49AA0 526 aa11.55□□□□□ -0.56
SMC4-216ENST00000485645 SMUG1Q53HV7 270 aa11.55□□□□□ -0.56
SMC4-216ENST00000485645 EPDR1Q9UM22 224 aa11.55□□□□□ -0.56
SMC4-216ENST00000485645 IGHV3-73A0A0B4J1V6 119 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 TRBV6-4A0A1B0GX49 114 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 KANTRA0A1W2PQU2 76 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 BCL2L11O43521 198 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 PSCAO43653 123 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 IGLV2-11P01706 119 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 LINC01556Q5JQF7 62 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 OR10J3Q5JRS4 329 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 DPPA3Q6W0C5 159 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 PRNTQ86SH4 94 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 C9orf85Q96MD7 179 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 FAT1Q14517 4588 aa11.54□□□□□ -0.56
SMC4-216ENST00000485645 A0A1W2PRE2 83 aa11.53□□□□□ -0.56
SMC4-216ENST00000485645 GGTLC3B5MD39 225 aa11.53□□□□□ -0.56
SMC4-216ENST00000485645 SEC11BP0C7V7 166 aa11.53□□□□□ -0.56
SMC4-216ENST00000485645 GCSHP23434 173 aa11.53□□□□□ -0.56
SMC4-216ENST00000485645 TCTE3Q8IZS6 198 aa11.53□□□□□ -0.56
SMC4-216ENST00000485645 CYB561D1Q8N8Q1 229 aa11.53□□□□□ -0.56
SMC4-216ENST00000485645 TMEM75Q8N9X5 138 aa11.53□□□□□ -0.56
SMC4-216ENST00000485645 ZNF471Q9BX82 626 aaPredicted RBP11.53□□□□□ -0.56
SMC4-216ENST00000485645 PGPEP1LA6NFU8 196 aa11.52□□□□□ -0.57
SMC4-216ENST00000485645 IBA57-AS1B1ANH7 110 aa11.52□□□□□ -0.57
SMC4-216ENST00000485645 ZNF506Q5JVG8 444 aa11.52□□□□□ -0.57
SMC4-216ENST00000485645 SAPCD1Q5SSQ6 148 aa11.52□□□□□ -0.57
SMC4-216ENST00000485645 TMUB2Q71RG4 321 aa11.52□□□□□ -0.57
SMC4-216ENST00000485645 PTH2Q96A98 100 aa11.52□□□□□ -0.57
SMC4-216ENST00000485645 MAP1LC3B2A6NCE7 125 aa11.51□□□□□ -0.57
SMC4-216ENST00000485645 UMAD1C9J7I0 102 aa11.51□□□□□ -0.57
SMC4-216ENST00000485645 PFDN1O60925 122 aa11.51□□□□□ -0.57
SMC4-216ENST00000485645 MGST1P10620 155 aaKnown RBP11.51□□□□□ -0.57
SMC4-216ENST00000485645 RNASE3P12724 160 aaKnown RBP11.51□□□□□ -0.57
SMC4-216ENST00000485645 FGF8P55075 233 aaPredicted RBP11.51□□□□□ -0.57
SMC4-216ENST00000485645 EIF5AP63241 154 aaKnown RBP11.51□□□□□ -0.57
SMC4-216ENST00000485645 LELP1Q5T871 98 aa11.51□□□□□ -0.57
SMC4-216ENST00000485645 FRZBQ92765 325 aa11.51□□□□□ -0.57
SMC4-216ENST00000485645 MAP1LC3BQ9GZQ8 125 aa11.51□□□□□ -0.57
SMC4-216ENST00000485645 FHITP49789 147 aa11.5□□□□□ -0.57
SMC4-216ENST00000485645 ATP6V0E2Q8NHE4 81 aa11.5□□□□□ -0.57
SMC4-216ENST00000485645 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
SMC4-216ENST00000485645 Q9HAA7 133 aa11.5□□□□□ -0.57
SMC4-216ENST00000485645 VPS13BQ7Z7G8 4022 aa11.5□□□□□ -0.57
SMC4-216ENST00000485645 IGLV5-52A0A0A0MRZ9 124 aa11.49□□□□□ -0.57
SMC4-216ENST00000485645 LRCOL1A6NCL2 159 aa11.49□□□□□ -0.57
SMC4-216ENST00000485645 IGHV3-30P01768 117 aa11.49□□□□□ -0.57
SMC4-216ENST00000485645 IGHV3-33P01772 117 aa11.49□□□□□ -0.57
SMC4-216ENST00000485645 INAFM2P0DMQ5 153 aa11.49□□□□□ -0.57
SMC4-216ENST00000485645 IGHV3-30-3P0DP02 117 aa11.49□□□□□ -0.57
SMC4-216ENST00000485645 IGHV3-30-5P0DP03 117 aa11.49□□□□□ -0.57
SMC4-216ENST00000485645 S100A4P26447 101 aaKnown RBP11.49□□□□□ -0.57
SMC4-216ENST00000485645 Q5VSD8 79 aa11.49□□□□□ -0.57
SMC4-216ENST00000485645 STOML3Q8TAV4 291 aa11.49□□□□□ -0.57
SMC4-216ENST00000485645 NTN5Q8WTR8 489 aaPredicted RBP11.49□□□□□ -0.57
SMC4-216ENST00000485645 LINC00479Q96M42 142 aa11.49□□□□□ -0.57
SMC4-216ENST00000485645 NKX6-2Q9C056 277 aaPredicted RBP11.49□□□□□ -0.57
SMC4-216ENST00000485645 FAM74A7A6NL05 159 aa11.48□□□□□ -0.57
SMC4-216ENST00000485645 IFNA7P01567 189 aa11.48□□□□□ -0.57
SMC4-216ENST00000485645 C1QBP02746 253 aa11.48□□□□□ -0.57
SMC4-216ENST00000485645 TPT1P13693 172 aaKnown RBP11.48□□□□□ -0.57
SMC4-216ENST00000485645 UBE2G2P60604 165 aa11.48□□□□□ -0.57
SMC4-216ENST00000485645 LGALSLQ3ZCW2 172 aaPredicted RBP11.48□□□□□ -0.57
SMC4-216ENST00000485645 TRAV34A0A0B4J273 112 aa11.47□□□□□ -0.57
SMC4-216ENST00000485645 IGKV3D-20A0A0C4DH25 116 aa11.47□□□□□ -0.57
SMC4-216ENST00000485645 FABP5P3A8MUU1 101 aa11.47□□□□□ -0.57
SMC4-216ENST00000485645 A8MWV9 139 aa11.47□□□□□ -0.57
SMC4-216ENST00000485645 ZFP2Q6ZN57 461 aa11.47□□□□□ -0.57
SMC4-216ENST00000485645 FAM213BQ8TBF2 198 aa11.47□□□□□ -0.57
SMC4-216ENST00000485645 MBD3L1Q8WWY6 194 aa11.47□□□□□ -0.57
SMC4-216ENST00000485645 PARLQ9H300 379 aa11.47□□□□□ -0.57
SMC4-216ENST00000485645 ARL2-SNX15V9GYD0 113 aa11.47□□□□□ -0.57
SMC4-216ENST00000485645 hCG_2014768A0A024R1R8 64 aa11.46□□□□□ -0.57
SMC4-216ENST00000485645 SMR3BP02814 79 aaPredicted RBP11.46□□□□□ -0.57
SMC4-216ENST00000485645 ASIPP42127 132 aa11.46□□□□□ -0.57
SMC4-216ENST00000485645 PIK3CD-AS1Q5SR53 167 aa11.46□□□□□ -0.57
SMC4-216ENST00000485645 AKAP14Q86UN6 197 aa11.46□□□□□ -0.57
SMC4-216ENST00000485645 Q8N814 137 aa11.46□□□□□ -0.57
SMC4-216ENST00000485645 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
SMC4-216ENST00000485645 GAGE1Q13065 139 aa11.45□□□□□ -0.58
SMC4-216ENST00000485645 GAGE4Q13068 117 aa11.45□□□□□ -0.58
SMC4-216ENST00000485645 GAGE5Q13069 117 aa11.45□□□□□ -0.58
SMC4-216ENST00000485645 LAGE3Q14657 143 aa11.45□□□□□ -0.58
SMC4-216ENST00000485645 GAGE13Q4V321 117 aa11.45□□□□□ -0.58
SMC4-216ENST00000485645 Q6ZSN1 163 aa11.45□□□□□ -0.58
SMC4-216ENST00000485645 SFT2D1Q8WV19 159 aa11.45□□□□□ -0.58
SMC4-216ENST00000485645 HIST1H2BAQ96A08 127 aa11.45□□□□□ -0.58
SMC4-216ENST00000485645 DNAH8Q96JB1 4490 aa11.44□□□□□ -0.58
SMC4-216ENST00000485645 PEX7O00628 323 aa11.44□□□□□ -0.58
SMC4-216ENST00000485645 TCEAL7Q9BRU2 100 aa11.44□□□□□ -0.58
SMC4-216ENST00000485645 TMEM70Q9BUB7 260 aa11.44□□□□□ -0.58
SMC4-216ENST00000485645 TM2D2Q9BX73 214 aa11.44□□□□□ -0.58
SMC4-216ENST00000485645 IL36BQ9NZH7 164 aa11.44□□□□□ -0.58
SMC4-216ENST00000485645 HERC1Q15751 4861 aa11.43□□□□□ -0.58
SMC4-216ENST00000485645 B4DEV8 164 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms