RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 GNRH2O43555 120 aa7.02□□□□□ -1.29
CTSA-208ENST00000485627 SNAI2O43623 268 aa7.02□□□□□ -1.29
CTSA-208ENST00000485627 RBMY1DP0C7P1 496 aaKnown RBP7.02□□□□□ -1.29
CTSA-208ENST00000485627 MED14OSP0DP75 135 aa7.02□□□□□ -1.29
CTSA-208ENST00000485627 IGLL1P15814 213 aa7.02□□□□□ -1.29
CTSA-208ENST00000485627 NTF3P20783 257 aa7.02□□□□□ -1.29
CTSA-208ENST00000485627 TRPT1Q86TN4 253 aaKnown RBP7.02□□□□□ -1.29
CTSA-208ENST00000485627 SSBP4Q9BWG4 385 aaPredicted RBP7.02□□□□□ -1.29
CTSA-208ENST00000485627 PHLDA3Q9Y5J5 127 aa7.02□□□□□ -1.29
CTSA-208ENST00000485627 SORL1Q92673 2214 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 CBY3A6NI87 242 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 PHOX2AO14813 284 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 KIAA1644Q3SXP7 199 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 TDRG1Q3Y452 100 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 PRR31Q5SQ13 230 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 DNLZQ5SXM8 178 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 MORN3Q6PF18 240 aaPredicted RBP7.01□□□□□ -1.29
CTSA-208ENST00000485627 LINC01587Q99440 93 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 TMEM208Q9BTX3 173 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 C1QTNF4Q9BXJ3 329 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 CNFNQ9BYD5 112 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 XCL2Q9UBD3 114 aa7.01□□□□□ -1.29
CTSA-208ENST00000485627 M0R381 172 aa7□□□□□ -1.29
CTSA-208ENST00000485627 CRXO43186 299 aaPredicted RBP7□□□□□ -1.29
CTSA-208ENST00000485627 HTN1P15515 57 aa7□□□□□ -1.29
CTSA-208ENST00000485627 RPL35AP18077 110 aaKnown RBP7□□□□□ -1.29
CTSA-208ENST00000485627 SRIP30626 198 aa7□□□□□ -1.29
CTSA-208ENST00000485627 SNRPEP62304 92 aaKnown RBP7□□□□□ -1.29
CTSA-208ENST00000485627 SLAQ13239 276 aa7□□□□□ -1.29
CTSA-208ENST00000485627 ZNF493Q6ZR52 646 aa7□□□□□ -1.29
CTSA-208ENST00000485627 ZNF575Q86XF7 245 aa7□□□□□ -1.29
CTSA-208ENST00000485627 TMEM256Q8N2U0 113 aa7□□□□□ -1.29
CTSA-208ENST00000485627 DEFB125Q8N687 156 aa7□□□□□ -1.29
CTSA-208ENST00000485627 GATD1Q8NB37 220 aa7□□□□□ -1.29
CTSA-208ENST00000485627 SYT8Q8NBV8 401 aa7□□□□□ -1.29
CTSA-208ENST00000485627 WFDC10AQ9H1F0 79 aa7□□□□□ -1.29
CTSA-208ENST00000485627 C19orf73Q9NVV2 129 aa7□□□□□ -1.29
CTSA-208ENST00000485627 ZMAT5Q9UDW3 170 aaKnown RBP7□□□□□ -1.29
CTSA-208ENST00000485627 VWFP04275 2813 aa7□□□□□ -1.29
CTSA-208ENST00000485627 BAGE3Q86Y29 109 aa6.99□□□□□ -1.29
CTSA-208ENST00000485627 Q8N1Y9 231 aa6.99□□□□□ -1.29
CTSA-208ENST00000485627 OR10AG1Q8NH19 301 aa6.99□□□□□ -1.29
CTSA-208ENST00000485627 TMEM191AQ9H0A3 160 aa6.99□□□□□ -1.29
CTSA-208ENST00000485627 GOLT1BQ9Y3E0 138 aa6.99□□□□□ -1.29
CTSA-208ENST00000485627 AGRNO00468 2067 aa6.99□□□□□ -1.29
CTSA-208ENST00000485627 IGHV4-4A0A075B6R2 117 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 IGHV3OR16-12A0A075B7B8 117 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 LOC102724200A0A096LPH7 203 aaPredicted RBP6.98□□□□□ -1.29
CTSA-208ENST00000485627 IGHV3-16A0A0C4DH30 117 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 C5orf52A6NGY3 159 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 SMIM17P0DL12 118 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 RNASE3P12724 160 aaKnown RBP6.98□□□□□ -1.29
CTSA-208ENST00000485627 S100A2P29034 98 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 ZNF415Q09FC8 603 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 FAM104BQ5XKR9 115 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 AMN1Q8IY45 258 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 AP1S3Q96PC3 154 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 LINC00467Q9BRT7 94 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 SCRT2Q9NQ03 307 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 MSRB1Q9NZV6 116 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 TP53TG3Q9ULZ0 132 aa6.98□□□□□ -1.29
CTSA-208ENST00000485627 RBMY1A1P0DJD3 496 aaKnown RBP6.97□□□□□ -1.29
CTSA-208ENST00000485627 RBMY1CP0DJD4 496 aa6.97□□□□□ -1.29
CTSA-208ENST00000485627 RBMY1FQ15415 496 aaKnown RBP6.97□□□□□ -1.29
CTSA-208ENST00000485627 OR10J3Q5JRS4 329 aa6.97□□□□□ -1.29
CTSA-208ENST00000485627 ALKBH7Q9BT30 221 aaPredicted RBP6.97□□□□□ -1.29
CTSA-208ENST00000485627 CSTL1Q9H114 145 aa6.97□□□□□ -1.29
CTSA-208ENST00000485627 MDFICQ9P1T7 246 aa6.97□□□□□ -1.29
CTSA-208ENST00000485627 LOC105371267A0A1B0GV96 52 aa6.96□□□□□ -1.3
CTSA-208ENST00000485627 PPBPP02775 128 aa6.96□□□□□ -1.3
CTSA-208ENST00000485627 HOXA5P20719 270 aa6.96□□□□□ -1.3
CTSA-208ENST00000485627 CKS2P33552 79 aa6.96□□□□□ -1.3
CTSA-208ENST00000485627 Q0VG73 95 aa6.96□□□□□ -1.3
CTSA-208ENST00000485627 MRPL51Q4U2R6 128 aaKnown RBP6.96□□□□□ -1.3
CTSA-208ENST00000485627 ORMDL3Q8N138 153 aa6.96□□□□□ -1.3
CTSA-208ENST00000485627 C9orf85Q96MD7 179 aa6.96□□□□□ -1.3
CTSA-208ENST00000485627 RCHY1Q96PM5 261 aa6.96□□□□□ -1.3
CTSA-208ENST00000485627 DPH3P1Q9H4G8 78 aa6.96□□□□□ -1.3
CTSA-208ENST00000485627 D6R8Y8 96 aa6.95□□□□□ -1.3
CTSA-208ENST00000485627 UBE2CO00762 179 aa6.95□□□□□ -1.3
CTSA-208ENST00000485627 SPRY2O43597 315 aa6.95□□□□□ -1.3
CTSA-208ENST00000485627 NXPH4O95158 308 aa6.95□□□□□ -1.3
CTSA-208ENST00000485627 RAB4AP20338 218 aa6.95□□□□□ -1.3
CTSA-208ENST00000485627 EVI2AP22794 236 aa6.95□□□□□ -1.3
CTSA-208ENST00000485627 APOC4P55056 127 aa6.95□□□□□ -1.3
CTSA-208ENST00000485627 PDZD11Q5EBL8 140 aa6.95□□□□□ -1.3
CTSA-208ENST00000485627 COA6Q5JTJ3 125 aaKnown RBP6.95□□□□□ -1.3
CTSA-208ENST00000485627 C1orf158Q8N1D5 194 aa6.95□□□□□ -1.3
CTSA-208ENST00000485627 PRELID3AQ96N28 172 aa6.95□□□□□ -1.3
CTSA-208ENST00000485627 SPXQ9BT56 116 aa6.95□□□□□ -1.3
CTSA-208ENST00000485627 M0R2P5 195 aa6.94□□□□□ -1.3
CTSA-208ENST00000485627 MGPP08493 103 aa6.94□□□□□ -1.3
CTSA-208ENST00000485627 AKR1D1P51857 326 aa6.94□□□□□ -1.3
CTSA-208ENST00000485627 ZNF876PQ49A33 203 aa6.94□□□□□ -1.3
CTSA-208ENST00000485627 C14orf178Q8N769 122 aaPredicted RBP6.94□□□□□ -1.3
CTSA-208ENST00000485627 C18orf32Q8TCD1 76 aa6.94□□□□□ -1.3
CTSA-208ENST00000485627 RNF185Q96GF1 192 aa6.94□□□□□ -1.3
CTSA-208ENST00000485627 GSN-AS1Q9NRJ2 163 aa6.94□□□□□ -1.3
CTSA-208ENST00000485627 KIR2DL5BA0A0G2JN68 375 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 308.3 ms