RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 C11orf52Q96A22 123 aa6.98□□□□□ -1.29
CPSF4-213ENST00000484112 SMIM12Q96EX1 92 aa6.98□□□□□ -1.29
CPSF4-213ENST00000484112 MDFICQ9P1T7 246 aa6.98□□□□□ -1.29
CPSF4-213ENST00000484112 GNG13Q9P2W3 67 aa6.98□□□□□ -1.29
CPSF4-213ENST00000484112 A0A1B0GV50 99 aa6.97□□□□□ -1.29
CPSF4-213ENST00000484112 MEF2BQ02080 365 aaPredicted RBP6.97□□□□□ -1.29
CPSF4-213ENST00000484112 ZNF674Q2M3X9 581 aa6.97□□□□□ -1.29
CPSF4-213ENST00000484112 DNLZQ5SXM8 178 aa6.97□□□□□ -1.29
CPSF4-213ENST00000484112 C6orf223Q8N319 242 aa6.97□□□□□ -1.29
CPSF4-213ENST00000484112 SCRT2Q9NQ03 307 aa6.97□□□□□ -1.29
CPSF4-213ENST00000484112 TRAV4A0A0B4J268 109 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 NBDYA0A0U1RRE5 68 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 SCO2A0A1W2PP80 73 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 GNRH2O43555 120 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 NDUFS6O75380 124 aaKnown RBP6.96□□□□□ -1.3
CPSF4-213ENST00000484112 NUDT3O95989 172 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 BCL2P10415 239 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 CCL20P78556 96 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 OR5I1Q13606 314 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 LINC01559Q495D7 138 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 TOR2AQ5JU69 321 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 Q8N1X5 172 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 ZC2HC1AQ96GY0 325 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 C9orf85Q96MD7 179 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 MLST8Q9BVC4 326 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 MRPL16Q9NX20 251 aaKnown RBP6.96□□□□□ -1.3
CPSF4-213ENST00000484112 PRO0255Q9UI72 69 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 VAX2Q9UIW0 290 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 HSPG2P98160 4391 aa6.96□□□□□ -1.3
CPSF4-213ENST00000484112 TRAV26-1A0A087WT03 109 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 IGKV3D-20A0A0C4DH25 116 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 KRBOX1C9JBD0 128 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 CXCL1P09341 107 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 HOXA5P20719 270 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 ASIPP42127 132 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 CCL18P55774 89 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 SPATA12Q7Z6I5 190 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 BAGE2Q86Y30 109 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 BIN3Q9NQY0 253 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 IL36BQ9NZH7 164 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 C11orf21Q9P2W6 132 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 NACAE9PAV3 2078 aa6.95□□□□□ -1.3
CPSF4-213ENST00000484112 B4DEV8 164 aa6.94□□□□□ -1.3
CPSF4-213ENST00000484112 SH2D1AO60880 128 aa6.94□□□□□ -1.3
CPSF4-213ENST00000484112 ORM1P02763 201 aa6.94□□□□□ -1.3
CPSF4-213ENST00000484112 RNASE3P12724 160 aaKnown RBP6.94□□□□□ -1.3
CPSF4-213ENST00000484112 S100A4P26447 101 aaKnown RBP6.94□□□□□ -1.3
CPSF4-213ENST00000484112 RPL35P42766 123 aaKnown RBP6.94□□□□□ -1.3
CPSF4-213ENST00000484112 CRIP1P50238 77 aa6.94□□□□□ -1.3
CPSF4-213ENST00000484112 ZNF876PQ49A33 203 aa6.94□□□□□ -1.3
CPSF4-213ENST00000484112 ZNRF2Q8NHG8 242 aa6.94□□□□□ -1.3
CPSF4-213ENST00000484112 HHLA3Q9XRX5 114 aa6.94□□□□□ -1.3
CPSF4-213ENST00000484112 TRGV4A0A0C4DH28 118 aa6.93□□□□□ -1.3
CPSF4-213ENST00000484112 TMEM250H0YL14 139 aa6.93□□□□□ -1.3
CPSF4-213ENST00000484112 CRYBA4P53673 196 aa6.93□□□□□ -1.3
CPSF4-213ENST00000484112 FHL2Q14192 279 aa6.93□□□□□ -1.3
CPSF4-213ENST00000484112 OR4C5Q8NGB2 326 aa6.93□□□□□ -1.3
CPSF4-213ENST00000484112 LRP1BQ9NZR2 4599 aa6.93□□□□□ -1.3
CPSF4-213ENST00000484112 A8MWV9 139 aa6.92□□□□□ -1.3
CPSF4-213ENST00000484112 PAX4O43316 350 aa6.92□□□□□ -1.3
CPSF4-213ENST00000484112 GNG4P50150 75 aa6.92□□□□□ -1.3
CPSF4-213ENST00000484112 ZFP2Q6ZN57 461 aa6.92□□□□□ -1.3
CPSF4-213ENST00000484112 SH2D6Q7Z4S9 175 aa6.92□□□□□ -1.3
CPSF4-213ENST00000484112 SYT8Q8NBV8 401 aa6.92□□□□□ -1.3
CPSF4-213ENST00000484112 VSIG2Q96IQ7 327 aa6.92□□□□□ -1.3
CPSF4-213ENST00000484112 LINC00588Q9Y4M8 146 aa6.92□□□□□ -1.3
CPSF4-213ENST00000484112 ICOSQ9Y6W8 199 aa6.92□□□□□ -1.3
CPSF4-213ENST00000484112 A0A0J9YY99 117 aa6.91□□□□□ -1.3
CPSF4-213ENST00000484112 RBFOX3A6NFN3 312 aa6.91□□□□□ -1.3
CPSF4-213ENST00000484112 C9JCJ5 164 aa6.91□□□□□ -1.3
CPSF4-213ENST00000484112 RS1O15537 224 aa6.91□□□□□ -1.3
CPSF4-213ENST00000484112 MRPL23Q16540 153 aaKnown RBP6.91□□□□□ -1.3
CPSF4-213ENST00000484112 CENPWQ5EE01 88 aa6.91□□□□□ -1.3
CPSF4-213ENST00000484112 ZNF506Q5JVG8 444 aa6.91□□□□□ -1.3
CPSF4-213ENST00000484112 C10orf91Q5T1B1 145 aa6.91□□□□□ -1.3
CPSF4-213ENST00000484112 ZNF479Q96JC4 524 aa6.91□□□□□ -1.3
CPSF4-213ENST00000484112 UPK3BQ9BT76 320 aa6.91□□□□□ -1.3
CPSF4-213ENST00000484112 SMDT1Q9H4I9 107 aa6.91□□□□□ -1.3
CPSF4-213ENST00000484112 A0A096LPF7 62 aa6.9□□□□□ -1.3
CPSF4-213ENST00000484112 TRBV6-4A0A1B0GX49 114 aa6.9□□□□□ -1.3
CPSF4-213ENST00000484112 TMEM218A2RU14 115 aa6.9□□□□□ -1.3
CPSF4-213ENST00000484112 M0R036 132 aa6.9□□□□□ -1.3
CPSF4-213ENST00000484112 RHODO00212 210 aa6.9□□□□□ -1.3
CPSF4-213ENST00000484112 IGHV3-53P01767 116 aa6.9□□□□□ -1.3
CPSF4-213ENST00000484112 ARMS2P0C7Q2 107 aa6.9□□□□□ -1.3
CPSF4-213ENST00000484112 MGST1P10620 155 aaKnown RBP6.9□□□□□ -1.3
CPSF4-213ENST00000484112 RPS20P60866 119 aaKnown RBP6.9□□□□□ -1.3
CPSF4-213ENST00000484112 CFAP126Q5VTH2 177 aa6.9□□□□□ -1.3
CPSF4-213ENST00000484112 ZFP82Q8N141 532 aa6.9□□□□□ -1.3
CPSF4-213ENST00000484112 DAZAP1Q96EP5 407 aaKnown RBP6.9□□□□□ -1.3
CPSF4-213ENST00000484112 DERL1Q9BUN8 251 aa6.9□□□□□ -1.3
CPSF4-213ENST00000484112 PHLDA3Q9Y5J5 127 aa6.9□□□□□ -1.3
CPSF4-213ENST00000484112 XKRY2A2RUG3 117 aa6.89□□□□□ -1.31
CPSF4-213ENST00000484112 PGPEP1LA6NFU8 196 aa6.89□□□□□ -1.31
CPSF4-213ENST00000484112 H3BVH4 76 aa6.89□□□□□ -1.31
CPSF4-213ENST00000484112 IGLV2-8P01709 118 aa6.89□□□□□ -1.31
CPSF4-213ENST00000484112 OR5AL1P0C617 328 aa6.89□□□□□ -1.31
CPSF4-213ENST00000484112 GATA1P15976 413 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-213ENST00000484112 BTF3P20290 206 aaKnown RBP6.89□□□□□ -1.31
CPSF4-213ENST00000484112 SRIP30626 198 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms