RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 FNDC10F2Z333 226 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 PAGE4O60829 102 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 ORM1P02763 201 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 FAM74A1Q5RGS3 127 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 PRR9Q5T870 116 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 TMEM14EPQ6UXP3 125 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 Q6ZQT7 251 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 Q6ZSA8 131 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 KCNRGQ8N5I3 272 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 LINC00469Q8N7U9 141 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 NHLRC2Q8NBF2 726 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 ASB13Q8WXK3 278 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 SMIM8Q96KF7 97 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 MGST2Q99735 147 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 SLC25A31Q9H0C2 315 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 MBD2Q9UBB5 411 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 TNFSF18Q9UNG2 199 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 IGKV2-40A0A087WW87 121 aaPredicted RBP3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 LOC100131303A0A0U1RQF7 123 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 KANTRA0A1W2PQU2 76 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 RNF222A6NCQ9 220 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 LECT2O14960 151 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 SCO1O75880 301 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 IGKV2D-40P01614 121 aaPredicted RBP3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 IGHV3-30P01768 117 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 IGHV3-33P01772 117 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 NMBP08949 121 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 IGHV3-30-3P0DP02 117 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 IGHV3-30-5P0DP03 117 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 LINC01620Q4KN68 170 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 MUC21Q5SSG8 566 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 TMEM78Q5T7P6 136 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 Q6ZRG5 221 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 SCXQ7RTU7 201 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 SLC51BQ86UW2 128 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 EXOC3-AS1Q8N2X6 119 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 THAP6Q8TBB0 222 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 BLNKQ8WV28 456 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 MRPL53Q96EL3 112 aaKnown RBP3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 FAM19A4Q96LR4 140 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 LINC00477Q96M19 166 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 ZNF471Q9BX82 626 aaPredicted RBP3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 AGPAT4-IT1Q9H0P7 198 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 DNAJC4Q9NNZ3 241 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 TIMM9Q9Y5J7 89 aa3.96□□□□□ -1.78
SEMA3D-204ENST00000484038 TRBV19A0A075B6N1 114 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 A0A0D9SG52 128 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 IBA57-AS1B1ANH7 110 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 BCL2L11O43521 198 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 ZNF253O75346 499 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 OXTP01178 125 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 HIST1H1EP10412 219 aaKnown RBP3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 CRISP2P16562 243 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 CAMLGP49069 296 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 RAB31Q13636 194 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 WFDC2Q14508 124 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 LINC01556Q5JQF7 62 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 OR10J3Q5JRS4 329 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 MIC13Q5XKP0 118 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 ZFAND2AQ8N6M9 145 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 OR10G4Q8NGN3 311 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 OR1L4Q8NGR5 311 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 Q8TAT8 98 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 PFDN5Q99471 154 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 OR5AC2Q9NZP5 309 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 GSKIPQ9P0R6 139 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 PRELID1Q9Y255 219 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 TRAV8-6A0A0B4J262 113 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 IGHV3-16A0A0C4DH30 117 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 PRSS1P07477 247 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 PYYP10082 97 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 S100A10P60903 97 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 ZNF345Q14585 488 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 TMEM183BQ1AE95 376 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 IAH1Q2TAA2 248 aaPredicted RBP3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 SH2D6Q7Z4S9 175 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 TMEM183AQ8IXX5 376 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 INO80EQ8NBZ0 244 aaPredicted RBP3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 OR4C5Q8NGB2 326 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 C2orf50Q96LR7 162 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 GGACTQ9BVM4 153 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 NMES1Q9C002 83 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 NAGKQ9UJ70 344 aa3.95□□□□□ -1.78
SEMA3D-204ENST00000484038 TRAV4A0A0B4J268 109 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 UBE2L5PA0A1B0GUS4 154 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 RS1O15537 224 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 GAS8-AS1O95177 125 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 ZNF138P52744 262 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 TAS2R30P59541 319 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 CYCSP99999 105 aaKnown RBP3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 PDE6HQ13956 83 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 FAM159AQ6UWV7 190 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 RASL10AQ92737 203 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 CYTL1Q9NRR1 136 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 SLC39A9Q9NUM3 307 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 ZNF492Q9P255 531 aa3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 LSM5Q9Y4Y9 91 aaKnown RBP3.94□□□□□ -1.78
SEMA3D-204ENST00000484038 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms