RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 VGLL1Q99990 258 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 NDFIP1Q9BT67 221 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 SORL1Q92673 2214 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 HAX1O00165 279 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 PRSS1P07477 247 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 CT83Q5H943 113 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 CLEC19AQ6UXS0 136 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 RNF182Q8N6D2 247 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 SPATA3Q8NHX4 192 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 SMIM12Q96EX1 92 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 RAX2Q96IS3 184 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 GFRA4Q9GZZ7 299 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 WI2-2373I1.2A0A1W2PRP0 233 aa7.3□□□□□ -1.24
LIMK1-205ENST00000483414 K7ERJ3 54 aa7.3□□□□□ -1.24
LIMK1-205ENST00000483414 CACNG7P62955 275 aa7.3□□□□□ -1.24
LIMK1-205ENST00000483414 ATP5G2Q06055 141 aa7.3□□□□□ -1.24
LIMK1-205ENST00000483414 MSRB1Q9NZV6 116 aa7.3□□□□□ -1.24
LIMK1-205ENST00000483414 TMEM14CQ9P0S9 112 aa7.3□□□□□ -1.24
LIMK1-205ENST00000483414 UFC1Q9Y3C8 167 aa7.3□□□□□ -1.24
LIMK1-205ENST00000483414 PF4V1P10720 104 aa7.3□□□□□ -1.24
LIMK1-205ENST00000483414 NDUFA11Q86Y39 141 aa7.3□□□□□ -1.24
LIMK1-205ENST00000483414 OR4X2Q8NGF9 303 aa7.3□□□□□ -1.24
LIMK1-205ENST00000483414 TSSC4Q9Y5U2 329 aaPredicted RBP7.3□□□□□ -1.24
LIMK1-205ENST00000483414 IGHV4OR15-8A0A075B7B6 117 aa7.29□□□□□ -1.24
LIMK1-205ENST00000483414 A0A087WW49 117 aa7.29□□□□□ -1.24
LIMK1-205ENST00000483414 ORMDL3Q8N138 153 aa7.29□□□□□ -1.24
LIMK1-205ENST00000483414 EEF1AKMT3Q96AZ1 226 aa7.29□□□□□ -1.24
LIMK1-205ENST00000483414 ST20Q9HBF5 79 aa7.29□□□□□ -1.24
LIMK1-205ENST00000483414 COL6A5A8TX70 2615 aa7.29□□□□□ -1.24
LIMK1-205ENST00000483414 A0A0G2JLM5 398 aa7.29□□□□□ -1.24
LIMK1-205ENST00000483414 ADAMTSL5Q6ZMM2 481 aa7.29□□□□□ -1.24
LIMK1-205ENST00000483414 PET117Q6UWS5 81 aa7.29□□□□□ -1.24
LIMK1-205ENST00000483414 IGHV3-11P01762 117 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 UNQ9165/PRO28630Q6UXU0 137 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 SIGLEC8Q9NYZ4 499 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 U3KQE9 123 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 EDN2P20800 178 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 BMI1P35226 326 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 DEFB136Q30KP8 78 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 C12orf54Q6X4T0 127 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 C2orf91Q6ZV80 131 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 SCRT2Q9NQ03 307 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 PEF1Q9UBV8 284 aaKnown RBP7.28□□□□□ -1.24
LIMK1-205ENST00000483414 KIR3DS1Q14943 382 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 MRPL51Q4U2R6 128 aaKnown RBP7.28□□□□□ -1.24
LIMK1-205ENST00000483414 C8orf86Q6ZUL3 223 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 GPHB5Q86YW7 130 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 PRR25Q96S07 402 aa7.28□□□□□ -1.24
LIMK1-205ENST00000483414 SPRY2O43597 315 aa7.27□□□□□ -1.25
LIMK1-205ENST00000483414 SFTA2Q6UW10 78 aa7.27□□□□□ -1.25
LIMK1-205ENST00000483414 PCP2Q8IVA1 136 aa7.27□□□□□ -1.25
LIMK1-205ENST00000483414 DEFB104AQ8WTQ1 72 aa7.27□□□□□ -1.25
LIMK1-205ENST00000483414 TMEM158Q8WZ71 300 aa7.27□□□□□ -1.25
LIMK1-205ENST00000483414 TEX48A0A1B0GUV7 120 aa7.27□□□□□ -1.25
LIMK1-205ENST00000483414 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.27□□□□□ -1.25
LIMK1-205ENST00000483414 LGALS9O00182 355 aa7.27□□□□□ -1.25
LIMK1-205ENST00000483414 ZNF80P51504 273 aaPredicted RBP7.27□□□□□ -1.25
LIMK1-205ENST00000483414 FAM104BQ5XKR9 115 aa7.27□□□□□ -1.25
LIMK1-205ENST00000483414 LYPD1Q8N2G4 141 aa7.27□□□□□ -1.25
LIMK1-205ENST00000483414 PRAC2D3DTV9 90 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 NPYP01303 97 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 GATA1P15976 413 aaPredicted RBP7.26□□□□□ -1.25
LIMK1-205ENST00000483414 SAMD13Q5VXD3 122 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 C11orf44Q8N8P7 122 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 TMEM190Q8WZ59 177 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 FABP5P3A8MUU1 101 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 NPIPB6E9PJ23 425 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 MRPS12O15235 138 aaKnown RBP7.26□□□□□ -1.25
LIMK1-205ENST00000483414 AZU1P20160 251 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 TMEM97Q5BJF2 176 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 NDUFA4O00483 81 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 FCER1GP30273 86 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 HOXD3P31249 432 aaPredicted RBP7.26□□□□□ -1.25
LIMK1-205ENST00000483414 KLHL30-AS1Q8NEE0 82 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 SPCS1Q9Y6A9 102 aa7.26□□□□□ -1.25
LIMK1-205ENST00000483414 ARL3P36405 182 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 LEPP41159 167 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 Q6AWC8 147 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 LINC00482Q8N8I6 264 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 IFI27L1Q96BM0 104 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 SLURP1P55000 103 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 TMEM78Q5T7P6 136 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 SPANXN1Q5VSR9 72 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 AMTNQ6UX39 209 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 OR11H1Q8NG94 326 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 DUX3Q96PT4 197 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 LINC01619G3V211 115 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 HBDP02042 147 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 GCSHP23434 173 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 S100A4P26447 101 aaKnown RBP7.25□□□□□ -1.25
LIMK1-205ENST00000483414 SH2D6Q7Z4S9 175 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 C16orf92Q96LL3 132 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 MAP1LC3AQ9H492 121 aa7.25□□□□□ -1.25
LIMK1-205ENST00000483414 GAS8-AS1O95177 125 aa7.24□□□□□ -1.25
LIMK1-205ENST00000483414 OR2K2Q8NGT1 345 aa7.24□□□□□ -1.25
LIMK1-205ENST00000483414 GLMPQ8WWB7 406 aa7.24□□□□□ -1.25
LIMK1-205ENST00000483414 DLX4Q92988 240 aaPredicted RBP7.24□□□□□ -1.25
LIMK1-205ENST00000483414 PRKDCP78527 4128 aaKnown RBP7.24□□□□□ -1.25
LIMK1-205ENST00000483414 TRAV26-2A0A0B4J265 109 aa7.24□□□□□ -1.25
LIMK1-205ENST00000483414 A0A1B0GW15 77 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms