RNA–Protein interactions for RNA: ENST00000481991.1

USP54-213, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 403 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-213ENST00000481991 PHYHIPLQ96FC7 376 aa4.86□□□□□ -1.63
USP54-213ENST00000481991 AP5S1Q9NUS5 200 aa4.86□□□□□ -1.63
USP54-213ENST00000481991 A0A087WWL8 130 aa4.85□□□□□ -1.63
USP54-213ENST00000481991 FAM25EA8MYX2 175 aa4.85□□□□□ -1.63
USP54-213ENST00000481991 SMIM18P0DKX4 95 aa4.85□□□□□ -1.63
USP54-213ENST00000481991 S100A4P26447 101 aaKnown RBP4.85□□□□□ -1.63
USP54-213ENST00000481991 RAB5CP51148 216 aa4.85□□□□□ -1.63
USP54-213ENST00000481991 AP3S2P59780 193 aa4.85□□□□□ -1.63
USP54-213ENST00000481991 MAJINQ3KP22 176 aa4.85□□□□□ -1.63
USP54-213ENST00000481991 PYDC2Q56P42 97 aa4.85□□□□□ -1.63
USP54-213ENST00000481991 CLPSL2Q6UWE3 100 aa4.85□□□□□ -1.63
USP54-213ENST00000481991 SGK494Q96LW2 274 aa4.85□□□□□ -1.63
USP54-213ENST00000481991 SLC25A21Q9BQT8 299 aaPredicted RBP4.85□□□□□ -1.63
USP54-213ENST00000481991 WDR83OSQ9Y284 106 aa4.85□□□□□ -1.63
USP54-213ENST00000481991 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.84□□□□□ -1.63
USP54-213ENST00000481991 H7C1H1 209 aa4.84□□□□□ -1.63
USP54-213ENST00000481991 MBPP02686 304 aaPredicted RBP4.84□□□□□ -1.63
USP54-213ENST00000481991 PRR4Q16378 134 aa4.84□□□□□ -1.63
USP54-213ENST00000481991 SPANXN2Q5MJ10 180 aa4.84□□□□□ -1.63
USP54-213ENST00000481991 FAM74A4Q5TZK3 123 aa4.84□□□□□ -1.63
USP54-213ENST00000481991 ATRAIDQ6UW56 229 aa4.84□□□□□ -1.63
USP54-213ENST00000481991 SPINK6Q6UWN8 80 aa4.84□□□□□ -1.63
USP54-213ENST00000481991 GOLT1AQ6ZVE7 132 aa4.84□□□□□ -1.63
USP54-213ENST00000481991 RNF185Q96GF1 192 aa4.84□□□□□ -1.63
USP54-213ENST00000481991 PARLQ9H300 379 aa4.84□□□□□ -1.63
USP54-213ENST00000481991 JPT2Q9H910 190 aa4.84□□□□□ -1.63
USP54-213ENST00000481991 LENEPQ9Y5L5 61 aa4.84□□□□□ -1.63
USP54-213ENST00000481991 IGKV2-24A0A0C4DH68 120 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 A8MWV9 139 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 S100A11P31949 105 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 PRR3P79522 188 aaKnown RBP4.83□□□□□ -1.64
USP54-213ENST00000481991 CTF1Q16619 201 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 FAM74A1Q5RGS3 127 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 TMEM75Q8N9X5 138 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 CLRN3Q8NCR9 226 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 FXYD5Q96DB9 178 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 FAM167A-AS1Q96KT0 104 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 CHCHD5Q9BSY4 110 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 NDFIP1Q9BT67 221 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 CHCHD7Q9BUK0 85 aa4.83□□□□□ -1.64
USP54-213ENST00000481991 IGLV10-54A0A075B6I4 117 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 FAM231BA6NCW3 169 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 ATP6V1G2O95670 118 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 IFNA7P01567 189 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 PVALBP20472 110 aaPredicted RBP4.82□□□□□ -1.64
USP54-213ENST00000481991 S100A10P60903 97 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 UBE2L3P68036 154 aaKnown RBP4.82□□□□□ -1.64
USP54-213ENST00000481991 HBG1P69891 147 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 HBG2P69892 147 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 ZFP2Q6ZN57 461 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 STPG4Q8N801 248 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 THAP6Q8TBB0 222 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 SPACA4Q8TDM5 124 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 TVP23CQ96ET8 276 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 FLVCR2Q9UPI3 526 aa4.82□□□□□ -1.64
USP54-213ENST00000481991 TRAV26-2A0A0B4J265 109 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 CCSO14618 274 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 TCRBP04435 133 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 RPL36AP83881 106 aaKnown RBP4.81□□□□□ -1.64
USP54-213ENST00000481991 COX6A2Q02221 97 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 CIRBPQ14011 172 aaKnown RBP4.81□□□□□ -1.64
USP54-213ENST00000481991 MIAQ16674 131 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 MPV17L2Q567V2 206 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 STX12Q86Y82 276 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 LINC00269Q8N2A0 174 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.81□□□□□ -1.64
USP54-213ENST00000481991 RPL36ALQ969Q0 106 aaKnown RBP4.81□□□□□ -1.64
USP54-213ENST00000481991 LINC00479Q96M42 142 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 C9orf85Q96MD7 179 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 SLIRPQ9GZT3 109 aaKnown RBP4.81□□□□□ -1.64
USP54-213ENST00000481991 PLAC8Q9NZF1 115 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 C11orf21Q9P2W6 132 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 MBD2Q9UBB5 411 aa4.81□□□□□ -1.64
USP54-213ENST00000481991 MUC21A0A0G2JKD1 596 aa4.8□□□□□ -1.64
USP54-213ENST00000481991 EIF3GO75821 320 aaKnown RBP eCLIP4.8□□□□□ -1.64
USP54-213ENST00000481991 GCGP01275 180 aa4.8□□□□□ -1.64
USP54-213ENST00000481991 LINC00694P0DN24 101 aa4.8□□□□□ -1.64
USP54-213ENST00000481991 RNASE3P12724 160 aaKnown RBP4.8□□□□□ -1.64
USP54-213ENST00000481991 SULT1A1P50225 295 aa4.8□□□□□ -1.64
USP54-213ENST00000481991 ZNF80P51504 273 aaPredicted RBP4.8□□□□□ -1.64
USP54-213ENST00000481991 GNG5P63218 68 aa4.8□□□□□ -1.64
USP54-213ENST00000481991 SPCS2Q15005 226 aa4.8□□□□□ -1.64
USP54-213ENST00000481991 ATP6V1FQ16864 119 aa4.8□□□□□ -1.64
USP54-213ENST00000481991 OR10G7Q8NGN6 311 aa4.8□□□□□ -1.64
USP54-213ENST00000481991 CHAC2Q8WUX2 184 aa4.8□□□□□ -1.64
USP54-213ENST00000481991 TMED6Q8WW62 240 aa4.8□□□□□ -1.64
USP54-213ENST00000481991 NPCDR1Q9BY65 106 aa4.8□□□□□ -1.64
USP54-213ENST00000481991 LPAP08519 4548 aa4.79□□□□□ -1.64
USP54-213ENST00000481991 TRBV6-8A0A0A6YYG3 113 aa4.79□□□□□ -1.64
USP54-213ENST00000481991 IGSF23A1L1A6 192 aa4.79□□□□□ -1.64
USP54-213ENST00000481991 PTTG1O95997 202 aa4.79□□□□□ -1.64
USP54-213ENST00000481991 GAGE6Q13070 117 aa4.79□□□□□ -1.64
USP54-213ENST00000481991 ZFP69Q49AA0 526 aa4.79□□□□□ -1.64
USP54-213ENST00000481991 XP32Q5T750 250 aa4.79□□□□□ -1.64
USP54-213ENST00000481991 PRNTQ86SH4 94 aa4.79□□□□□ -1.64
USP54-213ENST00000481991 TMEM252Q8N6L7 170 aa4.79□□□□□ -1.64
USP54-213ENST00000481991 PTH2Q96A98 100 aa4.79□□□□□ -1.64
USP54-213ENST00000481991 OTORQ9NRC9 128 aa4.79□□□□□ -1.64
USP54-213ENST00000481991 LYRM2Q9NU23 88 aaPredicted RBP4.79□□□□□ -1.64
USP54-213ENST00000481991 VAX2Q9UIW0 290 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms