RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 FAM159AQ6UWV7 190 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 DEFB125Q8N687 156 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 MRAP2Q96G30 205 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 LINC01546A6NGU7 62 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 SYS1-DBNDD2H3BUS1 97 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 NPYP01303 97 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 IFI27P40305 119 aaPredicted RBP11.76□□□□□ -0.53
RXRA-202ENST00000481739 TDRG1Q3Y452 100 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 PET117Q6UWS5 81 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.76□□□□□ -0.53
RXRA-202ENST00000481739 PHLDA3Q9Y5J5 127 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 ADAMTSL5Q6ZMM2 481 aa11.75□□□□□ -0.53
RXRA-202ENST00000481739 SELENOKQ9Y6D0 94 aa11.75□□□□□ -0.53
RXRA-202ENST00000481739 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 NXPH4O95158 308 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 EVI2AP22794 236 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 CDKN1BP46527 198 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 Q6ZQT7 251 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 SPATA12Q7Z6I5 190 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 TNFRSF6BO95407 300 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 HBDP02042 147 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 NSUN5P1Q3KNT7 163 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 DYNLRB2Q8TF09 96 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 RAX2Q96IS3 184 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 AP1S3Q96PC3 154 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 PAM16Q9Y3D7 125 aa11.74□□□□□ -0.53
RXRA-202ENST00000481739 TRAV25A0A0B4J276 109 aa11.73□□□□□ -0.53
RXRA-202ENST00000481739 LOC389332A0A1B0GUA5 103 aa11.73□□□□□ -0.53
RXRA-202ENST00000481739 CCL24O00175 119 aa11.73□□□□□ -0.53
RXRA-202ENST00000481739 NCR2O95944 276 aa11.73□□□□□ -0.53
RXRA-202ENST00000481739 FHL3Q13643 280 aa11.73□□□□□ -0.53
RXRA-202ENST00000481739 MRPL52Q86TS9 123 aaKnown RBP11.73□□□□□ -0.53
RXRA-202ENST00000481739 C14orf144Q96I85 54 aa11.73□□□□□ -0.53
RXRA-202ENST00000481739 DPH3P1Q9H4G8 78 aa11.73□□□□□ -0.53
RXRA-202ENST00000481739 A8MTW9 85 aa11.72□□□□□ -0.53
RXRA-202ENST00000481739 SMKR1H3BMG3 65 aa11.72□□□□□ -0.53
RXRA-202ENST00000481739 KRTAP10-3P60369 221 aa11.72□□□□□ -0.53
RXRA-202ENST00000481739 LBHQ53QV2 105 aaPredicted RBP11.72□□□□□ -0.53
RXRA-202ENST00000481739 OR2K2Q8NGT1 345 aa11.72□□□□□ -0.53
RXRA-202ENST00000481739 DLX4Q92988 240 aaPredicted RBP11.72□□□□□ -0.53
RXRA-202ENST00000481739 MIEN1Q9BRT3 115 aa11.72□□□□□ -0.53
RXRA-202ENST00000481739 ZNF747Q9BV97 191 aa11.72□□□□□ -0.53
RXRA-202ENST00000481739 TRAV9-2A0A087WT02 112 aa11.72□□□□□ -0.53
RXRA-202ENST00000481739 PPP1R17O96001 155 aa11.72□□□□□ -0.53
RXRA-202ENST00000481739 RNASE3P12724 160 aaKnown RBP11.72□□□□□ -0.53
RXRA-202ENST00000481739 SPAG8Q99932 426 aaPredicted RBP11.72□□□□□ -0.53
RXRA-202ENST00000481739 OR4C46A6NHA9 309 aa11.71□□□□□ -0.54
RXRA-202ENST00000481739 M0R381 172 aa11.71□□□□□ -0.54
RXRA-202ENST00000481739 KIR3DS1Q14943 382 aa11.71□□□□□ -0.54
RXRA-202ENST00000481739 SPATA45Q537H7 98 aa11.71□□□□□ -0.54
RXRA-202ENST00000481739 HLA-DRB4P13762 266 aa11.7□□□□□ -0.54
RXRA-202ENST00000481739 ZNF705AQ6ZN79 300 aaPredicted RBP11.7□□□□□ -0.54
RXRA-202ENST00000481739 TMEM61Q8N0U2 210 aa11.7□□□□□ -0.54
RXRA-202ENST00000481739 Q8N8P6 123 aa11.7□□□□□ -0.54
RXRA-202ENST00000481739 HLA-DRB4X5D2U9 266 aa11.7□□□□□ -0.54
RXRA-202ENST00000481739 A0A096LNJ9 63 aa11.7□□□□□ -0.54
RXRA-202ENST00000481739 TRAV12-3A0A0B4J271 114 aa11.7□□□□□ -0.54
RXRA-202ENST00000481739 GNRH2O43555 120 aa11.7□□□□□ -0.54
RXRA-202ENST00000481739 DEFB114Q30KQ6 69 aa11.7□□□□□ -0.54
RXRA-202ENST00000481739 AMTNQ6UX39 209 aa11.7□□□□□ -0.54
RXRA-202ENST00000481739 NRACQ8N912 160 aa11.7□□□□□ -0.54
RXRA-202ENST00000481739 TIMM8BQ9Y5J9 83 aaPredicted RBP11.7□□□□□ -0.54
RXRA-202ENST00000481739 WNK1Q9H4A3 2382 aa11.69□□□□□ -0.54
RXRA-202ENST00000481739 K7EMI3 77 aa11.69□□□□□ -0.54
RXRA-202ENST00000481739 CD7P09564 240 aa11.69□□□□□ -0.54
RXRA-202ENST00000481739 LINC01545Q5VT33 79 aa11.69□□□□□ -0.54
RXRA-202ENST00000481739 POM121L12Q8N7R1 296 aa11.69□□□□□ -0.54
RXRA-202ENST00000481739 IGHV1OR15-1A0A075B7D0 117 aa11.68□□□□□ -0.54
RXRA-202ENST00000481739 LINC00173Q6ZV60 143 aa11.68□□□□□ -0.54
RXRA-202ENST00000481739 NDUFA11Q86Y39 141 aa11.68□□□□□ -0.54
RXRA-202ENST00000481739 C20orf78Q9BR46 151 aa11.68□□□□□ -0.54
RXRA-202ENST00000481739 UQCR10Q9UDW1 63 aa11.68□□□□□ -0.54
RXRA-202ENST00000481739 ADARB2-AS1A8MUL3 147 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 FCER1GP30273 86 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 DEFB131AP59861 70 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 SYT8Q8NBV8 401 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 C9orf85Q96MD7 179 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 CLUHP3Q96NS8 147 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 IGLV2-18A0A075B6J9 118 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 HSBP1L1C9JCN9 74 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 SMIM17P0DL12 118 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 SPINK13Q1W4C9 94 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 ST20Q9HBF5 79 aa11.67□□□□□ -0.54
RXRA-202ENST00000481739 IGHV3-16A0A0C4DH30 117 aa11.66□□□□□ -0.54
RXRA-202ENST00000481739 H3BMM0 161 aa11.66□□□□□ -0.54
RXRA-202ENST00000481739 IGLC3P0DOY3 106 aa11.66□□□□□ -0.54
RXRA-202ENST00000481739 ATRQ13535 2644 aa11.66□□□□□ -0.54
RXRA-202ENST00000481739 TENM1Q9UKZ4 2725 aa11.65□□□□□ -0.54
RXRA-202ENST00000481739 IGKV3-20P01619 116 aa11.65□□□□□ -0.54
RXRA-202ENST00000481739 LGALS9BQ3B8N2 356 aa11.65□□□□□ -0.54
RXRA-202ENST00000481739 LGALS9CQ6DKI2 356 aa11.65□□□□□ -0.54
RXRA-202ENST00000481739 MAP6D1Q9H9H5 199 aa11.65□□□□□ -0.54
RXRA-202ENST00000481739 GAS8-AS1O95177 125 aa11.65□□□□□ -0.55
RXRA-202ENST00000481739 GATA1P15976 413 aaPredicted RBP11.65□□□□□ -0.55
RXRA-202ENST00000481739 CD300EQ496F6 205 aaPredicted RBP11.65□□□□□ -0.55
RXRA-202ENST00000481739 ATOH7Q8N100 152 aa11.65□□□□□ -0.55
RXRA-202ENST00000481739 C14orf178Q8N769 122 aaPredicted RBP11.65□□□□□ -0.55
RXRA-202ENST00000481739 IFI27L1Q96BM0 104 aa11.65□□□□□ -0.55
RXRA-202ENST00000481739 SMIM2Q9BVW6 85 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms