RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 NKX6-2Q9C056 277 aaPredicted RBP2.83□□□□□ -1.96
VPS13D-208ENST00000481484 NAGKQ9UJ70 344 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 HHLA3Q9XRX5 114 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 HERC1Q15751 4861 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 FAT1Q14517 4588 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 TRAV8-6A0A0B4J262 113 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 IGHV3-16A0A0C4DH30 117 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 TRBV6-4A0A1B0GX49 114 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 H0YIZ8 118 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 TAAR5O14804 337 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 PSCAO43653 123 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 IGHV3-53P01767 116 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 C1QBP02746 253 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 TYMSP04818 313 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 CRYGDP07320 174 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 STAG3L2P0CL84 134 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 STAG3L3P0CL85 134 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 ARL14EPLP0DKL9 152 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 GATA1P15976 413 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-208ENST00000481484 SMUG1Q53HV7 270 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 MUC21Q5SSG8 566 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 SAPCD1Q5SSQ6 148 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 LYPD5Q6UWN5 251 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 GOLT1AQ6ZVE7 132 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 CYB561D1Q8N8Q1 229 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 NHLRC2Q8NBF2 726 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 OR4C5Q8NGB2 326 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 FRZBQ92765 325 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 AQP10Q96PS8 301 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 TMEM70Q9BUB7 260 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 CHCHD7Q9BUK0 85 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 TREM1Q9NP99 234 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 COX11Q9Y6N1 276 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 ARL2-SNX15V9GYD0 113 aa2.82□□□□□ -1.96
VPS13D-208ENST00000481484 A0A087WTM6 91 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 A0A087WWC5 75 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 BORCS7-ASMTA0A0B4J1R7 106 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 IGHV3-38A0A0C4DH36 116 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 A0A1W2PRE2 83 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 A8MWV9 139 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 EPM2AB3EWF7 344 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 SIX6O95475 246 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 CXorf1O96002 111 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 TCRAP04437 139 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 GIPP09681 153 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-208ENST00000481484 GCHFRP30047 84 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 RAB2AP61019 212 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 PKIAP61925 76 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 LELP1Q5T871 98 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 ZFP2Q6ZN57 461 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 WFDC10BQ8IUB3 73 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 INO80EQ8NBZ0 244 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-208ENST00000481484 OR10G9Q8NGN4 311 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 OR10G7Q8NGN6 311 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 SUN5Q8TC36 379 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 RMI2Q96E14 147 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 ZNF479Q96JC4 524 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 C9orf85Q96MD7 179 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 TM2D2Q9BX73 214 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 SCRT2Q9NQ03 307 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 BATF3Q9NR55 127 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 RPH3ALQ9UNE2 315 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 TNFSF18Q9UNG2 199 aa2.81□□□□□ -1.96
VPS13D-208ENST00000481484 TRAV8-3A0A0A6YYJ7 113 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 CTXND1A0A1B0GTU2 59 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 PGPA6NDG6 321 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 GGTLC3B5MD39 225 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 F6UZH7 168 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 RS1O15537 224 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 GCGP01275 180 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 SFTA3P0C7M3 94 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 LINC00694P0DN24 101 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 PRB4P10163 310 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-208ENST00000481484 S100A4P26447 101 aaKnown RBP2.8□□□□□ -1.96
VPS13D-208ENST00000481484 ASIPP42127 132 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 FGF8P55075 233 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-208ENST00000481484 BLOC1S1P78537 153 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 FLI1Q01543 452 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-208ENST00000481484 FOXI1Q12951 378 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 ZNF876PQ49A33 203 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 OR10J3Q5JRS4 329 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 CFAP126Q5VTH2 177 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 Q86TA4 180 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 HSD17B11Q8NBQ5 300 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 RAB24Q969Q5 203 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 HIST1H2BAQ96A08 127 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 HYLS1Q96M11 299 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 SMIM3Q9BZL3 60 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 ACTR3CQ9C0K3 210 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-208ENST00000481484 GTSF1LQ9H1H1 148 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 IL36BQ9NZH7 164 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 MDFICQ9P1T7 246 aa2.8□□□□□ -1.96
VPS13D-208ENST00000481484 IGLV5-52A0A0A0MRZ9 124 aa2.79□□□□□ -1.96
VPS13D-208ENST00000481484 TRAV8-1A0A0A6YYK1 113 aa2.79□□□□□ -1.96
VPS13D-208ENST00000481484 TRBV10-1A0A0K0K1A3 114 aa2.79□□□□□ -1.96
VPS13D-208ENST00000481484 TRBV6-1A0A0K0K1D8 114 aa2.79□□□□□ -1.96
VPS13D-208ENST00000481484 IBA57-AS1B1ANH7 110 aa2.79□□□□□ -1.96
VPS13D-208ENST00000481484 PEX7O00628 323 aa2.79□□□□□ -1.96
VPS13D-208ENST00000481484 CXCL1P09341 107 aa2.79□□□□□ -1.96
VPS13D-208ENST00000481484 GCSHP23434 173 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms