RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 LAMTOR3Q9UHA4 124 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 I3L2K1 104 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 TNFRSF13BO14836 293 aaPredicted RBP7.41□□□□□ -1.22
GARNL3-216ENST00000481242 HLA-DRB4P13762 266 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 CFHR3Q02985 330 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 AGPAT4-IT1Q9H0P7 198 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 HLA-DRB4X5D2U9 266 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 K7EIM0 57 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 KLF5Q13887 457 aaPredicted RBP7.41□□□□□ -1.22
GARNL3-216ENST00000481242 MRPL23Q16540 153 aaKnown RBP7.41□□□□□ -1.22
GARNL3-216ENST00000481242 EDA2RQ9HAV5 297 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 V9GYV3 84 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 IGHV3-16A0A0C4DH30 117 aa7.4□□□□□ -1.22
GARNL3-216ENST00000481242 MRPL51Q4U2R6 128 aaKnown RBP7.4□□□□□ -1.22
GARNL3-216ENST00000481242 PIFOQ8TCI5 191 aa7.4□□□□□ -1.22
GARNL3-216ENST00000481242 FGF23Q9GZV9 251 aaPredicted RBP7.4□□□□□ -1.22
GARNL3-216ENST00000481242 SIRPDQ9H106 197 aa7.4□□□□□ -1.22
GARNL3-216ENST00000481242 IL17DQ8TAD2 202 aa7.4□□□□□ -1.22
GARNL3-216ENST00000481242 IGF2BP2-AS1Q96M15 143 aa7.4□□□□□ -1.22
GARNL3-216ENST00000481242 FAM110AQ9BQ89 295 aa7.4□□□□□ -1.22
GARNL3-216ENST00000481242 SMIM27A0A1W2PRY6 76 aa7.4□□□□□ -1.22
GARNL3-216ENST00000481242 LTAP01374 205 aa7.4□□□□□ -1.22
GARNL3-216ENST00000481242 C2orf16Q68DN1 1984 aa7.4□□□□□ -1.23
GARNL3-216ENST00000481242 IGKV1-17P01599 117 aa7.4□□□□□ -1.23
GARNL3-216ENST00000481242 ACYP1P07311 99 aa7.4□□□□□ -1.23
GARNL3-216ENST00000481242 LGALS9BQ3B8N2 356 aa7.4□□□□□ -1.23
GARNL3-216ENST00000481242 LGALS9CQ6DKI2 356 aa7.4□□□□□ -1.23
GARNL3-216ENST00000481242 C1orf43Q9BWL3 253 aa7.4□□□□□ -1.23
GARNL3-216ENST00000481242 CTSGP08311 255 aa7.39□□□□□ -1.23
GARNL3-216ENST00000481242 CCL18P55774 89 aa7.39□□□□□ -1.23
GARNL3-216ENST00000481242 PTH2Q96A98 100 aa7.39□□□□□ -1.23
GARNL3-216ENST00000481242 ZC2HC1AQ96GY0 325 aa7.39□□□□□ -1.23
GARNL3-216ENST00000481242 EML6Q6ZMW3 1958 aa7.39□□□□□ -1.23
GARNL3-216ENST00000481242 ANGP03950 147 aaKnown RBP7.39□□□□□ -1.23
GARNL3-216ENST00000481242 H3BMG7 143 aa7.39□□□□□ -1.23
GARNL3-216ENST00000481242 MRAPQ8TCY5 172 aa7.39□□□□□ -1.23
GARNL3-216ENST00000481242 U3KQE9 123 aa7.39□□□□□ -1.23
GARNL3-216ENST00000481242 KIF26AQ9ULI4 1882 aaPredicted RBP7.38□□□□□ -1.23
GARNL3-216ENST00000481242 BUB3O43684 328 aa7.38□□□□□ -1.23
GARNL3-216ENST00000481242 NAA38Q9BRA0 125 aaKnown RBP7.38□□□□□ -1.23
GARNL3-216ENST00000481242 CYYR1Q96J86 154 aa7.38□□□□□ -1.23
GARNL3-216ENST00000481242 SLURP1P55000 103 aa7.38□□□□□ -1.23
GARNL3-216ENST00000481242 C4orf3Q8WVX3 66 aa7.38□□□□□ -1.23
GARNL3-216ENST00000481242 SPRNQ5BIV9 151 aa7.38□□□□□ -1.23
GARNL3-216ENST00000481242 UTF1Q5T230 341 aa7.38□□□□□ -1.23
GARNL3-216ENST00000481242 Q8N7P7 452 aa7.38□□□□□ -1.23
GARNL3-216ENST00000481242 NOP10Q9NPE3 64 aaKnown RBP7.38□□□□□ -1.23
GARNL3-216ENST00000481242 FREM1Q5H8C1 2179 aa7.38□□□□□ -1.23
GARNL3-216ENST00000481242 IGF2RP11717 2491 aa7.37□□□□□ -1.23
GARNL3-216ENST00000481242 ZFP36P26651 326 aaKnown RBP7.37□□□□□ -1.23
GARNL3-216ENST00000481242 DEFB136Q30KP8 78 aa7.37□□□□□ -1.23
GARNL3-216ENST00000481242 DYNAPQ8N1N2 210 aa7.37□□□□□ -1.23
GARNL3-216ENST00000481242 ICOSQ9Y6W8 199 aa7.37□□□□□ -1.23
GARNL3-216ENST00000481242 ZNF106Q9H2Y7 1883 aaKnown RBP7.37□□□□□ -1.23
GARNL3-216ENST00000481242 A6NDX4 124 aa7.37□□□□□ -1.23
GARNL3-216ENST00000481242 C2orf70A6NJV1 201 aa7.37□□□□□ -1.23
GARNL3-216ENST00000481242 F8VRH5 84 aa7.37□□□□□ -1.23
GARNL3-216ENST00000481242 LMO4P61968 165 aa7.37□□□□□ -1.23
GARNL3-216ENST00000481242 CGB3P0DN86 165 aa7.37□□□□□ -1.23
GARNL3-216ENST00000481242 LINC00574Q9H8X3 128 aa7.37□□□□□ -1.23
GARNL3-216ENST00000481242 SMAD5-AS1Q9Y6J3 95 aa7.37□□□□□ -1.23
GARNL3-216ENST00000481242 H3BMM0 161 aa7.36□□□□□ -1.23
GARNL3-216ENST00000481242 UBE2WQ96B02 151 aa7.36□□□□□ -1.23
GARNL3-216ENST00000481242 C2orf82Q6UX34 121 aa7.36□□□□□ -1.23
GARNL3-216ENST00000481242 NDUFA12Q9UI09 145 aa7.36□□□□□ -1.23
GARNL3-216ENST00000481242 TMEM258P61165 79 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 COL4A4P53420 1690 aaPredicted RBP7.35□□□□□ -1.23
GARNL3-216ENST00000481242 INAFM2P0DMQ5 153 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 DAZ2Q13117 558 aaKnown RBP7.35□□□□□ -1.23
GARNL3-216ENST00000481242 DAZ4Q86SG3 579 aaKnown RBP7.35□□□□□ -1.23
GARNL3-216ENST00000481242 NRGNQ92686 78 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 DAZ3Q9NR90 486 aaKnown RBP7.35□□□□□ -1.23
GARNL3-216ENST00000481242 HIGD1BQ9P298 99 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 KLK5Q9Y337 293 aaPredicted RBP7.35□□□□□ -1.23
GARNL3-216ENST00000481242 HIVEP3Q5T1R4 2406 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 MYO9AB2RTY4 2548 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 IGHV4OR15-8A0A075B7B6 117 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 A0A087WW49 117 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 VWC2LB2RUY7 222 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 SORL1Q92673 2214 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 MED14OSP0DP75 135 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 RNF183Q96D59 192 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 SPATA25Q9BR10 227 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 COL4A3Q01955 1670 aa7.35□□□□□ -1.23
GARNL3-216ENST00000481242 DENND4AQ7Z401 1863 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 WI2-2373I1.2A0A1W2PRP0 233 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 F6UB75 175 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 IGHG4P01861 327 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 CGB7P0DN87 165 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 NPC2P61916 151 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 TEN1Q86WV5 123 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 CEND1Q8N111 149 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 DEFB104AQ8WTQ1 72 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 V9GYY9 64 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 FOXI1Q12951 378 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 TRAV13-2A0A0B4J235 113 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 IGHV3-38A0A0C4DH36 116 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 PRSS29PA6NIE9 313 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 TEX22C9J3V5 150 aa7.34□□□□□ -1.23
GARNL3-216ENST00000481242 YPEL4Q96NS1 127 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms