RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MAP1LC3BQ9GZQ8 125 aa7.83□□□□□ -1.16
CCM2-213ENST00000480658 MSRB1Q9NZV6 116 aa7.83□□□□□ -1.16
CCM2-213ENST00000480658 MUC4Q99102 2169 aa7.83□□□□□ -1.16
CCM2-213ENST00000480658 IGHV3-38A0A0C4DH36 116 aa7.82□□□□□ -1.16
CCM2-213ENST00000480658 FAM74A7A6NL05 159 aa7.82□□□□□ -1.16
CCM2-213ENST00000480658 HMSDA8MTL9 139 aa7.82□□□□□ -1.16
CCM2-213ENST00000480658 RS1O15537 224 aa7.82□□□□□ -1.16
CCM2-213ENST00000480658 CRYGDP07320 174 aa7.82□□□□□ -1.16
CCM2-213ENST00000480658 SEC11BP0C7V7 166 aa7.82□□□□□ -1.16
CCM2-213ENST00000480658 Q5BKY6 102 aa7.82□□□□□ -1.16
CCM2-213ENST00000480658 FAM162BQ5T6X4 162 aa7.82□□□□□ -1.16
CCM2-213ENST00000480658 COX8CQ7Z4L0 72 aa7.82□□□□□ -1.16
CCM2-213ENST00000480658 SGK494Q96LW2 274 aa7.82□□□□□ -1.16
CCM2-213ENST00000480658 IL36BQ9NZH7 164 aa7.82□□□□□ -1.16
CCM2-213ENST00000480658 TRBV6-1A0A0K0K1D8 114 aa7.81□□□□□ -1.16
CCM2-213ENST00000480658 KANTRA0A1W2PQU2 76 aa7.81□□□□□ -1.16
CCM2-213ENST00000480658 B4DEV8 164 aa7.81□□□□□ -1.16
CCM2-213ENST00000480658 PFDN1O60925 122 aa7.81□□□□□ -1.16
CCM2-213ENST00000480658 LAGE3Q14657 143 aa7.81□□□□□ -1.16
CCM2-213ENST00000480658 LGALSLQ3ZCW2 172 aaPredicted RBP7.81□□□□□ -1.16
CCM2-213ENST00000480658 LINC01556Q5JQF7 62 aa7.81□□□□□ -1.16
CCM2-213ENST00000480658 ZNF506Q5JVG8 444 aa7.81□□□□□ -1.16
CCM2-213ENST00000480658 Q6ZRN7 208 aaPredicted RBP7.81□□□□□ -1.16
CCM2-213ENST00000480658 SLC25A29Q8N8R3 303 aa7.81□□□□□ -1.16
CCM2-213ENST00000480658 DNAH17Q9UFH2 4485 aa7.81□□□□□ -1.16
CCM2-213ENST00000480658 A0A087WWC5 75 aa7.8□□□□□ -1.16
CCM2-213ENST00000480658 TEX46H3BTG2 121 aa7.8□□□□□ -1.16
CCM2-213ENST00000480658 ZNF80P51504 273 aaPredicted RBP7.8□□□□□ -1.16
CCM2-213ENST00000480658 UBE2G2P60604 165 aa7.8□□□□□ -1.16
CCM2-213ENST00000480658 ZNF726P1Q15940 193 aa7.8□□□□□ -1.16
CCM2-213ENST00000480658 OR10J3Q5JRS4 329 aa7.8□□□□□ -1.16
CCM2-213ENST00000480658 TOR2AQ5JU69 321 aa7.8□□□□□ -1.16
CCM2-213ENST00000480658 DNLZQ5SXM8 178 aa7.8□□□□□ -1.16
CCM2-213ENST00000480658 LELP1Q5T871 98 aa7.8□□□□□ -1.16
CCM2-213ENST00000480658 EIF5AL1Q6IS14 154 aaKnown RBP7.8□□□□□ -1.16
CCM2-213ENST00000480658 KCNRGQ8N5I3 272 aa7.8□□□□□ -1.16
CCM2-213ENST00000480658 GTSF1LQ9H1H1 148 aa7.8□□□□□ -1.16
CCM2-213ENST00000480658 PSCAO43653 123 aa7.79□□□□□ -1.16
CCM2-213ENST00000480658 RNASE3P12724 160 aaKnown RBP7.79□□□□□ -1.16
CCM2-213ENST00000480658 AKR1C3P42330 323 aa7.79□□□□□ -1.16
CCM2-213ENST00000480658 CST9LP1Q5W188 147 aa7.79□□□□□ -1.16
CCM2-213ENST00000480658 WFDC10BQ8IUB3 73 aa7.79□□□□□ -1.16
CCM2-213ENST00000480658 OR11H4Q8NGC9 324 aa7.79□□□□□ -1.16
CCM2-213ENST00000480658 ATP6V0E2Q8NHE4 81 aa7.79□□□□□ -1.16
CCM2-213ENST00000480658 PHLDA3Q9Y5J5 127 aa7.79□□□□□ -1.16
CCM2-213ENST00000480658 HERC2O95714 4834 aa7.78□□□□□ -1.16
CCM2-213ENST00000480658 BCL2L11O43521 198 aa7.78□□□□□ -1.16
CCM2-213ENST00000480658 LTAP01374 205 aa7.78□□□□□ -1.16
CCM2-213ENST00000480658 TPT1P13693 172 aaKnown RBP7.78□□□□□ -1.16
CCM2-213ENST00000480658 RAB5CP51148 216 aa7.78□□□□□ -1.16
CCM2-213ENST00000480658 LINC01559Q495D7 138 aa7.78□□□□□ -1.16
CCM2-213ENST00000480658 ZFP82Q8N141 532 aa7.78□□□□□ -1.16
CCM2-213ENST00000480658 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.78□□□□□ -1.16
CCM2-213ENST00000480658 NTN5Q8WTR8 489 aaPredicted RBP7.78□□□□□ -1.16
CCM2-213ENST00000480658 TM2D2Q9BX73 214 aa7.78□□□□□ -1.16
CCM2-213ENST00000480658 PARLQ9H300 379 aa7.78□□□□□ -1.16
CCM2-213ENST00000480658 CYTL1Q9NRR1 136 aa7.78□□□□□ -1.16
CCM2-213ENST00000480658 C11orf21Q9P2W6 132 aa7.78□□□□□ -1.16
CCM2-213ENST00000480658 TRAV34A0A0B4J273 112 aa7.77□□□□□ -1.17
CCM2-213ENST00000480658 IGKV3D-20A0A0C4DH25 116 aa7.77□□□□□ -1.17
CCM2-213ENST00000480658 G3V3Q6 166 aa7.77□□□□□ -1.17
CCM2-213ENST00000480658 CXCL1P09341 107 aa7.77□□□□□ -1.17
CCM2-213ENST00000480658 ZNF674Q2M3X9 581 aa7.77□□□□□ -1.17
CCM2-213ENST00000480658 MAPKAPK5-AS1Q8N8E1 139 aa7.77□□□□□ -1.17
CCM2-213ENST00000480658 SFT2D1Q8WV19 159 aa7.77□□□□□ -1.17
CCM2-213ENST00000480658 ZNF471Q9BX82 626 aaPredicted RBP7.77□□□□□ -1.17
CCM2-213ENST00000480658 COX11Q9Y6N1 276 aa7.77□□□□□ -1.17
CCM2-213ENST00000480658 URGCP-MRPS24S4R325 110 aa7.77□□□□□ -1.17
CCM2-213ENST00000480658 A0A087WTM6 91 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 TRAV8-3A0A0A6YYJ7 113 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 TRBV10-1A0A0K0K1A3 114 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 PGPEP1LA6NFU8 196 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 IBA57-AS1B1ANH7 110 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 KRBOX1C9JBD0 128 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 H3BVH4 76 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 SH2D1AO60880 128 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 KCNIP4Q6PIL6 250 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 FAM213BQ8TBF2 198 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 MBD3L1Q8WWY6 194 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 ZC2HC1AQ96GY0 325 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 LINC00479Q96M42 142 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 MANBALQ9NQG1 85 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 DNAH11Q96DT5 4516 aa7.76□□□□□ -1.17
CCM2-213ENST00000480658 KIAA1109Q2LD37 5005 aa7.75□□□□□ -1.17
CCM2-213ENST00000480658 H2AFB1P0C5Y9 115 aa7.75□□□□□ -1.17
CCM2-213ENST00000480658 ARMS2P0C7Q2 107 aa7.75□□□□□ -1.17
CCM2-213ENST00000480658 Q8N1X5 172 aa7.75□□□□□ -1.17
CCM2-213ENST00000480658 RMI2Q96E14 147 aa7.75□□□□□ -1.17
CCM2-213ENST00000480658 CHCHD7Q9BUK0 85 aa7.75□□□□□ -1.17
CCM2-213ENST00000480658 IGHV3-73A0A0B4J1V6 119 aa7.74□□□□□ -1.17
CCM2-213ENST00000480658 LOC100131303A0A0U1RQF7 123 aa7.74□□□□□ -1.17
CCM2-213ENST00000480658 TAGLN2P37802 199 aaKnown RBP7.74□□□□□ -1.17
CCM2-213ENST00000480658 KRTAP10-2P60368 255 aa7.74□□□□□ -1.17
CCM2-213ENST00000480658 PKIAP61925 76 aa7.74□□□□□ -1.17
CCM2-213ENST00000480658 ELOBQ15370 118 aa7.74□□□□□ -1.17
CCM2-213ENST00000480658 SMIM12Q96EX1 92 aa7.74□□□□□ -1.17
CCM2-213ENST00000480658 SFRP2Q96HF1 295 aa7.74□□□□□ -1.17
CCM2-213ENST00000480658 SCRT2Q9NQ03 307 aa7.74□□□□□ -1.17
CCM2-213ENST00000480658 M0R036 132 aa7.73□□□□□ -1.17
CCM2-213ENST00000480658 PAGE4O60829 102 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms