RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 LINC01356Q8N9X3 169 aa12.88□□□□□ -0.35
PKD1-213ENST00000480227 RPL39LQ96EH5 51 aaKnown RBP12.88□□□□□ -0.35
PKD1-213ENST00000480227 MRPL35Q9NZE8 188 aaKnown RBP12.88□□□□□ -0.35
PKD1-213ENST00000480227 NBPF19A0A087WUL8 3843 aa12.88□□□□□ -0.35
PKD1-213ENST00000480227 A0A096LNT2 108 aa12.88□□□□□ -0.35
PKD1-213ENST00000480227 DPM2O94777 84 aa12.88□□□□□ -0.35
PKD1-213ENST00000480227 GATA3P23771 443 aa12.88□□□□□ -0.35
PKD1-213ENST00000480227 HSD52Q0P140 79 aa12.88□□□□□ -0.35
PKD1-213ENST00000480227 ZC2HC1BQ5TFG8 222 aa12.88□□□□□ -0.35
PKD1-213ENST00000480227 RNASE8Q8TDE3 154 aaKnown RBP12.88□□□□□ -0.35
PKD1-213ENST00000480227 SMIM2Q9BVW6 85 aa12.88□□□□□ -0.35
PKD1-213ENST00000480227 SIVA1O15304 175 aa12.87□□□□□ -0.35
PKD1-213ENST00000480227 DSCR9P59020 149 aa12.87□□□□□ -0.35
PKD1-213ENST00000480227 RASL10AQ92737 203 aa12.87□□□□□ -0.35
PKD1-213ENST00000480227 MYO9AB2RTY4 2548 aa12.87□□□□□ -0.35
PKD1-213ENST00000480227 SLC25A16P16260 332 aa12.87□□□□□ -0.35
PKD1-213ENST00000480227 DPH3P1Q9H4G8 78 aa12.87□□□□□ -0.35
PKD1-213ENST00000480227 RNASE3P12724 160 aaKnown RBP12.86□□□□□ -0.35
PKD1-213ENST00000480227 SUMO2P61956 95 aaKnown RBP12.86□□□□□ -0.35
PKD1-213ENST00000480227 BBC3Q96PG8 261 aaPredicted RBP12.86□□□□□ -0.35
PKD1-213ENST00000480227 NAA38Q9BRA0 125 aaKnown RBP12.86□□□□□ -0.35
PKD1-213ENST00000480227 CR1P17927 2039 aa12.86□□□□□ -0.35
PKD1-213ENST00000480227 A6NDN8 102 aa12.86□□□□□ -0.35
PKD1-213ENST00000480227 DCANP1Q8TF63 244 aa12.86□□□□□ -0.35
PKD1-213ENST00000480227 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.84□□□□□ -0.35
PKD1-213ENST00000480227 APRG1Q8IVJ8 170 aa12.84□□□□□ -0.35
PKD1-213ENST00000480227 RAB37Q96AX2 223 aa12.84□□□□□ -0.35
PKD1-213ENST00000480227 RNF223E7ERA6 249 aa12.84□□□□□ -0.35
PKD1-213ENST00000480227 A0A087WX48 190 aa12.83□□□□□ -0.36
PKD1-213ENST00000480227 K7EMT4 169 aa12.83□□□□□ -0.36
PKD1-213ENST00000480227 ID1P41134 155 aa12.83□□□□□ -0.36
PKD1-213ENST00000480227 AP1S3Q96PC3 154 aa12.83□□□□□ -0.36
PKD1-213ENST00000480227 H3BUT2 72 aa12.83□□□□□ -0.36
PKD1-213ENST00000480227 K7EP13 123 aa12.83□□□□□ -0.36
PKD1-213ENST00000480227 ZNF688P0C7X2 276 aa12.83□□□□□ -0.36
PKD1-213ENST00000480227 H3BRM9 83 aa12.82□□□□□ -0.36
PKD1-213ENST00000480227 IGKV3-20P01619 116 aa12.82□□□□□ -0.36
PKD1-213ENST00000480227 COX6B1P14854 86 aa12.82□□□□□ -0.36
PKD1-213ENST00000480227 KRTAP10-9P60411 292 aa12.82□□□□□ -0.36
PKD1-213ENST00000480227 ORMDL2Q53FV1 153 aa12.82□□□□□ -0.36
PKD1-213ENST00000480227 FAM159AQ6UWV7 190 aa12.82□□□□□ -0.36
PKD1-213ENST00000480227 DEFB104AQ8WTQ1 72 aa12.82□□□□□ -0.36
PKD1-213ENST00000480227 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
PKD1-213ENST00000480227 TRAV12-3A0A0B4J271 114 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 KLLNB2CW77 178 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 GCSHP23434 173 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 DUX5Q96PT3 197 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 C20orf78Q9BR46 151 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 JPT2Q9H910 190 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 TRBV25-1A0A075B6N4 114 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 TRBV7-9A0A0J9YWB2 115 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 C9orf118A6NHY6 69 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 MED14OSP0DP75 135 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 PSMG4Q5JS54 123 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 NEGR1Q7Z3B1 354 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 CHAC1Q9BUX1 264 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 ZNF580Q9UK33 172 aa12.81□□□□□ -0.36
PKD1-213ENST00000480227 JMJD8Q96S16 334 aa12.8□□□□□ -0.36
PKD1-213ENST00000480227 AKAP9Q99996 3911 aa12.8□□□□□ -0.36
PKD1-213ENST00000480227 CD7P09564 240 aa12.8□□□□□ -0.36
PKD1-213ENST00000480227 SYNJ2BPP57105 145 aa12.8□□□□□ -0.36
PKD1-213ENST00000480227 SONP18583 2426 aaKnown RBP12.79□□□□□ -0.36
PKD1-213ENST00000480227 GAGE10A6NGK3 116 aa12.79□□□□□ -0.36
PKD1-213ENST00000480227 MAPKAPK5-AS1Q8N8E1 139 aa12.79□□□□□ -0.36
PKD1-213ENST00000480227 TOMM6Q96B49 74 aa12.79□□□□□ -0.36
PKD1-213ENST00000480227 CSTL1Q9H114 145 aa12.79□□□□□ -0.36
PKD1-213ENST00000480227 APCP25054 2843 aa12.79□□□□□ -0.36
PKD1-213ENST00000480227 TRAV12-2A0A075B6T6 113 aa12.79□□□□□ -0.36
PKD1-213ENST00000480227 A0A087WWL8 130 aa12.79□□□□□ -0.36
PKD1-213ENST00000480227 FXYD2P54710 66 aa12.79□□□□□ -0.36
PKD1-213ENST00000480227 C2orf66Q6UXQ4 117 aa12.79□□□□□ -0.36
PKD1-213ENST00000480227 BEX4Q9NWD9 120 aaPredicted RBP12.79□□□□□ -0.36
PKD1-213ENST00000480227 VPREB3Q9UKI3 123 aa12.79□□□□□ -0.36
PKD1-213ENST00000480227 CBY1Q9Y3M2 126 aa12.79□□□□□ -0.36
PKD1-213ENST00000480227 KMT2BQ9UMN6 2715 aaPredicted RBP12.79□□□□□ -0.36
PKD1-213ENST00000480227 J3QLI3 93 aa12.78□□□□□ -0.36
PKD1-213ENST00000480227 PLNP26678 52 aa12.78□□□□□ -0.36
PKD1-213ENST00000480227 GAGE12BA1L429 117 aa12.78□□□□□ -0.36
PKD1-213ENST00000480227 H7C1H1 209 aa12.78□□□□□ -0.36
PKD1-213ENST00000480227 HIGD1BQ9P298 99 aa12.78□□□□□ -0.36
PKD1-213ENST00000480227 CUBNO60494 3623 aa12.78□□□□□ -0.36
PKD1-213ENST00000480227 IGHV4OR15-8A0A075B7B6 117 aa12.77□□□□□ -0.36
PKD1-213ENST00000480227 A0A087WW49 117 aa12.77□□□□□ -0.36
PKD1-213ENST00000480227 F8VRH5 84 aa12.77□□□□□ -0.36
PKD1-213ENST00000480227 RBX1P62877 108 aa12.77□□□□□ -0.36
PKD1-213ENST00000480227 CHTOPQ9Y3Y2 248 aaKnown RBP12.77□□□□□ -0.36
PKD1-213ENST00000480227 K7EMI3 77 aa12.77□□□□□ -0.37
PKD1-213ENST00000480227 IGHV4-31P0DP07 118 aa12.77□□□□□ -0.37
PKD1-213ENST00000480227 LINC00315P59091 139 aa12.77□□□□□ -0.37
PKD1-213ENST00000480227 CST9LQ9H4G1 147 aa12.77□□□□□ -0.37
PKD1-213ENST00000480227 KIF25-AS1Q9Y6Z4 181 aa12.77□□□□□ -0.37
PKD1-213ENST00000480227 F5H697 171 aa12.76□□□□□ -0.37
PKD1-213ENST00000480227 HOXA3O43365 443 aaPredicted RBP12.76□□□□□ -0.37
PKD1-213ENST00000480227 NEXN-AS1Q8NBZ9 246 aa12.76□□□□□ -0.37
PKD1-213ENST00000480227 ZNF702PQ9H963 129 aa12.76□□□□□ -0.37
PKD1-213ENST00000480227 TRAV12-1A0A0B4J245 112 aa12.76□□□□□ -0.37
PKD1-213ENST00000480227 NXPH4O95158 308 aa12.76□□□□□ -0.37
PKD1-213ENST00000480227 SNRPD3P62318 126 aaKnown RBP12.76□□□□□ -0.37
PKD1-213ENST00000480227 RNF151Q2KHN1 245 aa12.76□□□□□ -0.37
PKD1-213ENST00000480227 Q6YL49 198 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms