RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 TRIQKQ629K1 86 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 UNQ9165/PRO28630Q6UXU0 137 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 CACNG8Q8WXS5 425 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 FAM19A4Q96LR4 140 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 CIB3Q96Q77 187 aaPredicted RBP3.15□□□□□ -1.91
UPF3A-205ENST00000479712 VSIRQ9H7M9 311 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 C8orf17Q9NRJ1 99 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 SMPXQ9UHP9 88 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 SSPOA2VEC9 5147 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 IGLV4-60A0A075B6I1 120 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 TRAV14DV4A0A0A6YYC5 116 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 IGHV7-4-1A0A0J9YVY3 117 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 IZUMO1RA6ND01 250 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 CEBPZOSA8MTT3 80 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 OR11H12B2RN74 326 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 CFDP00746 253 aaPredicted RBP3.14□□□□□ -1.91
UPF3A-205ENST00000479712 IGKV1-17P01599 117 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 LINC00869P0C866 280 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 MT1HL1P0DM35 61 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 IL7P13232 177 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 NPY1RP25929 384 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 CRYBB3P26998 211 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 INPP1P49441 399 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 KRTAP10-1P60331 282 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 RNASE13Q5GAN3 156 aaKnown RBP3.14□□□□□ -1.91
UPF3A-205ENST00000479712 TOMM20LQ6UXN7 152 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 LYZL2Q7Z4W2 148 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 DEFB125Q8N687 156 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 LINC00469Q8N7U9 141 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 CIRBP-AS1Q8TBR5 109 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 DTD1Q8TEA8 209 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 S100ZQ8WXG8 99 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 CCDC32Q9BV29 185 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 RHPN1-AS1Q9BWJ2 59 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 MAP1LC3CQ9BXW4 147 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 ARV1Q9H2C2 271 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 TP53TG1Q9Y2A0 90 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 KLF12Q9Y4X4 402 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 S4R3C0 116 aa3.14□□□□□ -1.91
UPF3A-205ENST00000479712 C9orf170A2RU37 121 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 FAM25EA8MYX2 175 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 CCNKO75909 580 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 IFNA10P01566 189 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 FABP1P07148 127 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 CD7P09564 240 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 IGLC1P0CG04 106 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 NPPCP23582 126 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 EIF2B2P49770 351 aaKnown RBP3.13□□□□□ -1.91
UPF3A-205ENST00000479712 TAS2R60P59551 318 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 PPP1R1AQ13522 171 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 C6orf99Q4VX62 202 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 C5orf47Q569G3 176 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 PRSS54Q6PEW0 395 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 TMED4Q7Z7H5 227 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 UBE2DNLQ8IWF7 75 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 OR1S1Q8NH92 325 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 METTL26Q96S19 204 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 BATF3Q9NR55 127 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 PUS1Q9Y606 427 aaKnown RBP eCLIP3.13□□□□□ -1.91
UPF3A-205ENST00000479712 RFNGQ9Y644 331 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 V9GYY9 64 aa3.13□□□□□ -1.91
UPF3A-205ENST00000479712 IGKV2-28A0A075B6P5 120 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 LOC102724200A0A096LPH7 203 aaPredicted RBP3.12□□□□□ -1.91
UPF3A-205ENST00000479712 IGHV3-21A0A0B4J1V1 117 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 FNDC10F2Z333 226 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 PLA2G10O15496 165 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 LYRM1O43325 122 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 SYNGR2O43760 224 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 IFNA21P01568 189 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 IGKV2D-28P01615 120 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 OR4E1P0C645 316 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 P0DMU3 169 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 FAM231AP0DMU4 169 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 FAM231CP0DMU5 169 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 OR10J1P30954 320 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 S100A7P31151 101 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 AP2S1P53680 142 aaPredicted RBP3.12□□□□□ -1.91
UPF3A-205ENST00000479712 TAS2R30P59541 319 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 DHRS2Q13268 280 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 SPINK9Q5DT21 86 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 C1orf194Q5T5A4 169 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 SAMD13Q5VXD3 122 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 ENKURQ8TC29 256 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 Q8WTZ3 238 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 TRGV9Q99603 122 aa3.12□□□□□ -1.91
UPF3A-205ENST00000479712 MRPL36Q9P0J6 103 aaKnown RBP3.12□□□□□ -1.91
UPF3A-205ENST00000479712 TRAV8-4A0A0B4J246 113 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 K7EPK0 472 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 PSPHP1O15172 72 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 P01737 135 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 TCRBP04435 133 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 IL5P05113 134 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 RD3LP0DJH9 198 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 TCF24Q7RTU0 167 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 S100A7AQ86SG5 101 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 SLC7A5P1Q8MH63 180 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 LRRC20Q8TCA0 184 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 SMIM8Q96KF7 97 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 GGACTQ9BVM4 153 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms