RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 MIR17HGQ75NE6 70 aa7.32□□□□□ -1.24
HDAC8-217ENST00000478743 FXYD5Q96DB9 178 aa7.32□□□□□ -1.24
HDAC8-217ENST00000478743 LENEPQ9Y5L5 61 aa7.32□□□□□ -1.24
HDAC8-217ENST00000478743 TRBV6-8A0A0A6YYG3 113 aa7.31□□□□□ -1.24
HDAC8-217ENST00000478743 TSPAN13O95857 204 aa7.31□□□□□ -1.24
HDAC8-217ENST00000478743 UBE2D3P61077 147 aa7.31□□□□□ -1.24
HDAC8-217ENST00000478743 UBE2D2P62837 147 aa7.31□□□□□ -1.24
HDAC8-217ENST00000478743 PTH2Q96A98 100 aa7.31□□□□□ -1.24
HDAC8-217ENST00000478743 KCNS1Q96KK3 526 aa7.31□□□□□ -1.24
HDAC8-217ENST00000478743 BCL7BQ9BQE9 202 aa7.31□□□□□ -1.24
HDAC8-217ENST00000478743 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
HDAC8-217ENST00000478743 MBPP02686 304 aaPredicted RBP7.3□□□□□ -1.24
HDAC8-217ENST00000478743 RAB5CP51148 216 aa7.3□□□□□ -1.24
HDAC8-217ENST00000478743 RBX1P62877 108 aa7.3□□□□□ -1.24
HDAC8-217ENST00000478743 PPP1R1AQ13522 171 aa7.3□□□□□ -1.24
HDAC8-217ENST00000478743 LGALSLQ3ZCW2 172 aaPredicted RBP7.3□□□□□ -1.24
HDAC8-217ENST00000478743 HIGD2BQ4VC39 106 aa7.3□□□□□ -1.24
HDAC8-217ENST00000478743 C12orf45Q8N5I9 185 aaPredicted RBP7.3□□□□□ -1.24
HDAC8-217ENST00000478743 SMIM4Q8WVI0 70 aa7.3□□□□□ -1.24
HDAC8-217ENST00000478743 MIXL1Q9H2W2 232 aa7.3□□□□□ -1.24
HDAC8-217ENST00000478743 WDR83OSQ9Y284 106 aa7.3□□□□□ -1.24
HDAC8-217ENST00000478743 PTTG1O95997 202 aa7.29□□□□□ -1.24
HDAC8-217ENST00000478743 CHCHD5Q9BSY4 110 aa7.29□□□□□ -1.24
HDAC8-217ENST00000478743 MCUBQ9NWR8 336 aa7.29□□□□□ -1.24
HDAC8-217ENST00000478743 ANKRD20A5PA0PJZ0 165 aa7.28□□□□□ -1.24
HDAC8-217ENST00000478743 A8MWV9 139 aa7.28□□□□□ -1.24
HDAC8-217ENST00000478743 SFT2D2O95562 160 aa7.28□□□□□ -1.24
HDAC8-217ENST00000478743 SCGB1D2O95969 90 aa7.28□□□□□ -1.24
HDAC8-217ENST00000478743 IFNA7P01567 189 aa7.28□□□□□ -1.24
HDAC8-217ENST00000478743 RPS10P46783 165 aaKnown RBP7.28□□□□□ -1.24
HDAC8-217ENST00000478743 VBP1P61758 197 aa7.28□□□□□ -1.24
HDAC8-217ENST00000478743 RANP62826 216 aaKnown RBP7.28□□□□□ -1.24
HDAC8-217ENST00000478743 SSBP1Q04837 148 aaKnown RBP7.28□□□□□ -1.24
HDAC8-217ENST00000478743 DIRAS2Q96HU8 199 aa7.28□□□□□ -1.24
HDAC8-217ENST00000478743 UBE2L5PA0A1B0GUS4 154 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 TSC22D2O75157 780 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 CSN1S1P47710 185 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 RPL29P47914 159 aaKnown RBP7.27□□□□□ -1.25
HDAC8-217ENST00000478743 GAGE6Q13070 117 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 TMEM128Q5BJH2 165 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 FAM74A4Q5TZK3 123 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 NTM-AS1Q6ZSK4 140 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 SUN5Q8TC36 379 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 SGK494Q96LW2 274 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 GGACTQ9BVM4 153 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 TREM1Q9NP99 234 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 SCP2D1Q9UJQ7 156 aa7.27□□□□□ -1.25
HDAC8-217ENST00000478743 IGLV1-50A0A075B6I6 118 aa7.26□□□□□ -1.25
HDAC8-217ENST00000478743 REG3AQ06141 175 aa7.26□□□□□ -1.25
HDAC8-217ENST00000478743 TMED6Q8WW62 240 aa7.26□□□□□ -1.25
HDAC8-217ENST00000478743 HYLS1Q96M11 299 aa7.26□□□□□ -1.25
HDAC8-217ENST00000478743 SCGB3A2Q96PL1 93 aa7.26□□□□□ -1.25
HDAC8-217ENST00000478743 C7orf66A4D0T2 115 aa7.25□□□□□ -1.25
HDAC8-217ENST00000478743 CST7O76096 145 aa7.25□□□□□ -1.25
HDAC8-217ENST00000478743 BAXQ07812 192 aa7.25□□□□□ -1.25
HDAC8-217ENST00000478743 C1orf137Q5JT78 98 aa7.25□□□□□ -1.25
HDAC8-217ENST00000478743 GOLT1AQ6ZVE7 132 aa7.25□□□□□ -1.25
HDAC8-217ENST00000478743 DYNC2LI1Q8TCX1 351 aa7.25□□□□□ -1.25
HDAC8-217ENST00000478743 RETNLBQ9BQ08 111 aa7.25□□□□□ -1.25
HDAC8-217ENST00000478743 A0A1W2PNN7 141 aa7.24□□□□□ -1.25
HDAC8-217ENST00000478743 H0Y9J4 135 aa7.24□□□□□ -1.25
HDAC8-217ENST00000478743 EIF3GO75821 320 aaKnown RBP eCLIP7.24□□□□□ -1.25
HDAC8-217ENST00000478743 MT-ND6P03923 174 aa7.24□□□□□ -1.25
HDAC8-217ENST00000478743 GNG5P63218 68 aa7.24□□□□□ -1.25
HDAC8-217ENST00000478743 C20orf203Q8NBC4 194 aa7.24□□□□□ -1.25
HDAC8-217ENST00000478743 TRBV7-3A0A075B6L6 115 aa7.23□□□□□ -1.25
HDAC8-217ENST00000478743 PIGBOS1A0A0B4J2F0 54 aa7.23□□□□□ -1.25
HDAC8-217ENST00000478743 RPL36AP83881 106 aaKnown RBP7.23□□□□□ -1.25
HDAC8-217ENST00000478743 LCE2CQ5TA81 110 aa7.23□□□□□ -1.25
HDAC8-217ENST00000478743 MZT2AQ6P582 158 aa7.23□□□□□ -1.25
HDAC8-217ENST00000478743 FER1L6-AS1Q8NA97 138 aa7.23□□□□□ -1.25
HDAC8-217ENST00000478743 DIRC1Q969H9 104 aa7.23□□□□□ -1.25
HDAC8-217ENST00000478743 RPL36ALQ969Q0 106 aaKnown RBP7.23□□□□□ -1.25
HDAC8-217ENST00000478743 UQCC1Q9NVA1 299 aa7.23□□□□□ -1.25
HDAC8-217ENST00000478743 RAB26Q9ULW5 256 aa7.23□□□□□ -1.25
HDAC8-217ENST00000478743 IGKV3D-20A0A0C4DH25 116 aa7.22□□□□□ -1.25
HDAC8-217ENST00000478743 FGF7P21781 194 aa7.22□□□□□ -1.25
HDAC8-217ENST00000478743 TAS2R30P59541 319 aa7.22□□□□□ -1.25
HDAC8-217ENST00000478743 MRPS10P82664 201 aaKnown RBP7.22□□□□□ -1.25
HDAC8-217ENST00000478743 KRTAP11-1Q8IUC1 163 aa7.22□□□□□ -1.25
HDAC8-217ENST00000478743 NEXN-AS1Q8NBZ9 246 aa7.22□□□□□ -1.25
HDAC8-217ENST00000478743 SLIRPQ9GZT3 109 aaKnown RBP7.22□□□□□ -1.25
HDAC8-217ENST00000478743 CDIP1Q9H305 208 aa7.22□□□□□ -1.25
HDAC8-217ENST00000478743 IGLV4-60A0A075B6I1 120 aa7.21□□□□□ -1.26
HDAC8-217ENST00000478743 RHODO00212 210 aa7.21□□□□□ -1.26
HDAC8-217ENST00000478743 GCGP01275 180 aa7.21□□□□□ -1.26
HDAC8-217ENST00000478743 IGLV7-43P04211 117 aa7.21□□□□□ -1.26
HDAC8-217ENST00000478743 S100A10P60903 97 aa7.21□□□□□ -1.26
HDAC8-217ENST00000478743 UBE2L3P68036 154 aaKnown RBP7.21□□□□□ -1.26
HDAC8-217ENST00000478743 CYCSP99999 105 aaKnown RBP7.21□□□□□ -1.26
HDAC8-217ENST00000478743 PRR27Q6MZM9 219 aa7.21□□□□□ -1.26
HDAC8-217ENST00000478743 C15orf40Q8WUR7 153 aa7.21□□□□□ -1.26
HDAC8-217ENST00000478743 TRIM63Q969Q1 353 aa7.21□□□□□ -1.26
HDAC8-217ENST00000478743 RABL2AQ9UBK7 228 aaPredicted RBP7.21□□□□□ -1.26
HDAC8-217ENST00000478743 H3BVH4 76 aa7.2□□□□□ -1.26
HDAC8-217ENST00000478743 CTDSP2O14595 271 aa7.2□□□□□ -1.26
HDAC8-217ENST00000478743 OR7C2O60412 319 aa7.2□□□□□ -1.26
HDAC8-217ENST00000478743 UBE2D1P51668 147 aa7.2□□□□□ -1.26
HDAC8-217ENST00000478743 PIK3CD-AS1Q5SR53 167 aa7.2□□□□□ -1.26
HDAC8-217ENST00000478743 PHF5AQ7RTV0 110 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms