RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PIK3CD-AS1Q5SR53 167 aa9.76□□□□□ -0.85
SMARCE1-209ENST00000478349 LELP1Q5T871 98 aa9.76□□□□□ -0.85
SMARCE1-209ENST00000478349 PRNTQ86SH4 94 aa9.76□□□□□ -0.85
SMARCE1-209ENST00000478349 SGK494Q96LW2 274 aa9.76□□□□□ -0.85
SMARCE1-209ENST00000478349 C9orf85Q96MD7 179 aa9.76□□□□□ -0.85
SMARCE1-209ENST00000478349 NKX6-2Q9C056 277 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1-209ENST00000478349 IGLV5-52A0A0A0MRZ9 124 aa9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 A8MWV9 139 aa9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 GGTLC3B5MD39 225 aa9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 IFNA7P01567 189 aa9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 GIPP09681 153 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 ASIPP42127 132 aa9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 LAGE3Q14657 143 aa9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 ZNF506Q5JVG8 444 aa9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 ZFP2Q6ZN57 461 aa9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 TM2D2Q9BX73 214 aa9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 GTSF1LQ9H1H1 148 aa9.75□□□□□ -0.85
SMARCE1-209ENST00000478349 IBA57-AS1B1ANH7 110 aa9.74□□□□□ -0.85
SMARCE1-209ENST00000478349 TOR2AQ5JU69 321 aa9.74□□□□□ -0.85
SMARCE1-209ENST00000478349 SYT8Q8NBV8 401 aa9.74□□□□□ -0.85
SMARCE1-209ENST00000478349 LRP1BQ9NZR2 4599 aa9.73□□□□□ -0.85
SMARCE1-209ENST00000478349 CTXND1A0A1B0GTU2 59 aa9.73□□□□□ -0.85
SMARCE1-209ENST00000478349 FABP5P3A8MUU1 101 aa9.73□□□□□ -0.85
SMARCE1-209ENST00000478349 RHODO00212 210 aa9.73□□□□□ -0.85
SMARCE1-209ENST00000478349 SEC11BP0C7V7 166 aa9.73□□□□□ -0.85
SMARCE1-209ENST00000478349 ZNF80P51504 273 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-209ENST00000478349 AKR1C8PQ5T2L2 129 aa9.73□□□□□ -0.85
SMARCE1-209ENST00000478349 HIST1H2BAQ96A08 127 aa9.73□□□□□ -0.85
SMARCE1-209ENST00000478349 Q9HAA7 133 aa9.73□□□□□ -0.85
SMARCE1-209ENST00000478349 A0A087WWC5 75 aa9.72□□□□□ -0.85
SMARCE1-209ENST00000478349 FXYD6-FXYD2A0A087WZ82 144 aa9.72□□□□□ -0.85
SMARCE1-209ENST00000478349 IGHV3-73A0A0B4J1V6 119 aa9.72□□□□□ -0.85
SMARCE1-209ENST00000478349 IGLV2-11P01706 119 aa9.72□□□□□ -0.85
SMARCE1-209ENST00000478349 FGF8P55075 233 aaPredicted RBP9.72□□□□□ -0.85
SMARCE1-209ENST00000478349 LGALSLQ3ZCW2 172 aaPredicted RBP9.72□□□□□ -0.85
SMARCE1-209ENST00000478349 TCEAL7Q9BRU2 100 aa9.72□□□□□ -0.85
SMARCE1-209ENST00000478349 TMEM70Q9BUB7 260 aa9.72□□□□□ -0.85
SMARCE1-209ENST00000478349 C11orf21Q9P2W6 132 aa9.72□□□□□ -0.85
SMARCE1-209ENST00000478349 ARL2-SNX15V9GYD0 113 aa9.72□□□□□ -0.85
SMARCE1-209ENST00000478349 TRAV8-3A0A0A6YYJ7 113 aa9.71□□□□□ -0.86
SMARCE1-209ENST00000478349 PGPEP1LA6NFU8 196 aa9.71□□□□□ -0.86
SMARCE1-209ENST00000478349 PEX7O00628 323 aa9.71□□□□□ -0.86
SMARCE1-209ENST00000478349 IGHV3-30P01768 117 aa9.71□□□□□ -0.86
SMARCE1-209ENST00000478349 IGHV3-33P01772 117 aa9.71□□□□□ -0.86
SMARCE1-209ENST00000478349 IGHV3-30-3P0DP02 117 aa9.71□□□□□ -0.86
SMARCE1-209ENST00000478349 IGHV3-30-5P0DP03 117 aa9.71□□□□□ -0.86
SMARCE1-209ENST00000478349 RNASE3P12724 160 aaKnown RBP9.71□□□□□ -0.86
SMARCE1-209ENST00000478349 KRTAP10-1P60331 282 aa9.71□□□□□ -0.86
SMARCE1-209ENST00000478349 Q5VSD8 79 aa9.71□□□□□ -0.86
SMARCE1-209ENST00000478349 COX11Q9Y6N1 276 aa9.71□□□□□ -0.86
SMARCE1-209ENST00000478349 B4DEV8 164 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 INAFM2P0DMQ5 153 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 XGP55808 180 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 UBE2G1P62253 170 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 RPL7L1Q6DKI1 246 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 DPPA3Q6W0C5 159 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 Q86TA4 180 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 Q8N814 137 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 STOML3Q8TAV4 291 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 PARLQ9H300 379 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 IL36BQ9NZH7 164 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 ZFP30Q9Y2G7 519 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 URGCP-MRPS24S4R325 110 aa9.7□□□□□ -0.86
SMARCE1-209ENST00000478349 OR11H4Q8NGC9 324 aa9.69□□□□□ -0.86
SMARCE1-209ENST00000478349 OR2T35Q8NGX2 323 aa9.69□□□□□ -0.86
SMARCE1-209ENST00000478349 RMI2Q96E14 147 aa9.69□□□□□ -0.86
SMARCE1-209ENST00000478349 FMC1Q96HJ9 113 aa9.69□□□□□ -0.86
SMARCE1-209ENST00000478349 LRCOL1A6NCL2 159 aa9.68□□□□□ -0.86
SMARCE1-209ENST00000478349 RNF222A6NCQ9 220 aa9.68□□□□□ -0.86
SMARCE1-209ENST00000478349 GAGE12JA6NER3 117 aa9.68□□□□□ -0.86
SMARCE1-209ENST00000478349 UBE2G2P60604 165 aa9.68□□□□□ -0.86
SMARCE1-209ENST00000478349 GAGE1Q13065 139 aa9.68□□□□□ -0.86
SMARCE1-209ENST00000478349 GAGE4Q13068 117 aa9.68□□□□□ -0.86
SMARCE1-209ENST00000478349 GAGE5Q13069 117 aa9.68□□□□□ -0.86
SMARCE1-209ENST00000478349 GAGE13Q4V321 117 aa9.68□□□□□ -0.86
SMARCE1-209ENST00000478349 FAM162BQ5T6X4 162 aa9.68□□□□□ -0.86
SMARCE1-209ENST00000478349 LINC00528Q8N1L1 170 aa9.68□□□□□ -0.86
SMARCE1-209ENST00000478349 TRAV34A0A0B4J273 112 aa9.67□□□□□ -0.86
SMARCE1-209ENST00000478349 IGKV3D-20A0A0C4DH25 116 aa9.67□□□□□ -0.86
SMARCE1-209ENST00000478349 H3BVH4 76 aa9.67□□□□□ -0.86
SMARCE1-209ENST00000478349 C1QBP02746 253 aa9.67□□□□□ -0.86
SMARCE1-209ENST00000478349 KCNIP4Q6PIL6 250 aa9.67□□□□□ -0.86
SMARCE1-209ENST00000478349 PHLDA3Q9Y5J5 127 aa9.67□□□□□ -0.86
SMARCE1-209ENST00000478349 DNAH5Q8TE73 4624 aa9.66□□□□□ -0.86
SMARCE1-209ENST00000478349 MAP1LC3B2A6NCE7 125 aa9.66□□□□□ -0.86
SMARCE1-209ENST00000478349 FAM74A7A6NL05 159 aa9.66□□□□□ -0.86
SMARCE1-209ENST00000478349 TPT1P13693 172 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-209ENST00000478349 LORP23490 312 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-209ENST00000478349 DNLZQ5SXM8 178 aa9.66□□□□□ -0.86
SMARCE1-209ENST00000478349 Q6ZSN1 163 aa9.66□□□□□ -0.86
SMARCE1-209ENST00000478349 LINC00479Q96M42 142 aa9.66□□□□□ -0.86
SMARCE1-209ENST00000478349 MAP1LC3BQ9GZQ8 125 aa9.66□□□□□ -0.86
SMARCE1-209ENST00000478349 LINC00694P0DN24 101 aa9.65□□□□□ -0.86
SMARCE1-209ENST00000478349 FHITP49789 147 aa9.65□□□□□ -0.86
SMARCE1-209ENST00000478349 ELOBQ15370 118 aa9.65□□□□□ -0.86
SMARCE1-209ENST00000478349 ZNF726P1Q15940 193 aa9.65□□□□□ -0.86
SMARCE1-209ENST00000478349 FAM74A4Q5TZK3 123 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms