RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 NCOR2Q9Y618 2525 aa11.23□□□□□ -0.61
HDAC6-220ENST00000477528 ANKRD39Q53RE8 183 aa11.23□□□□□ -0.61
HDAC6-220ENST00000477528 GPHB5Q86YW7 130 aa11.23□□□□□ -0.61
HDAC6-220ENST00000477528 IGLV2-11P01706 119 aa11.23□□□□□ -0.61
HDAC6-220ENST00000477528 PRADC1Q9BSG0 188 aa11.23□□□□□ -0.61
HDAC6-220ENST00000477528 TMEM89A2RUT3 159 aa11.22□□□□□ -0.61
HDAC6-220ENST00000477528 TIMM21Q9BVV7 248 aa11.22□□□□□ -0.61
HDAC6-220ENST00000477528 TRBV12-3P01733 135 aa11.22□□□□□ -0.61
HDAC6-220ENST00000477528 IGHV3-53P01767 116 aa11.22□□□□□ -0.61
HDAC6-220ENST00000477528 DEFB113Q30KQ7 82 aa11.22□□□□□ -0.61
HDAC6-220ENST00000477528 DEFB125Q8N687 156 aa11.22□□□□□ -0.61
HDAC6-220ENST00000477528 PHLDA1Q8WV24 401 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-220ENST00000477528 PGPEP1Q9NXJ5 209 aa11.22□□□□□ -0.61
HDAC6-220ENST00000477528 IGF1P05019 195 aa11.22□□□□□ -0.61
HDAC6-220ENST00000477528 TAL2Q16559 108 aa11.22□□□□□ -0.61
HDAC6-220ENST00000477528 PCP2Q8IVA1 136 aa11.22□□□□□ -0.61
HDAC6-220ENST00000477528 IGLC6P0CF74 106 aa11.21□□□□□ -0.61
HDAC6-220ENST00000477528 MED14OSP0DP75 135 aa11.21□□□□□ -0.61
HDAC6-220ENST00000477528 RPL35AP18077 110 aaKnown RBP11.21□□□□□ -0.61
HDAC6-220ENST00000477528 CDSNQ15517 529 aa11.21□□□□□ -0.61
HDAC6-220ENST00000477528 ZFAND3Q9H8U3 227 aa11.21□□□□□ -0.61
HDAC6-220ENST00000477528 SPXQ9BT56 116 aa11.21□□□□□ -0.61
HDAC6-220ENST00000477528 RPL39LQ96EH5 51 aaKnown RBP11.21□□□□□ -0.62
HDAC6-220ENST00000477528 CHCHD5Q9BSY4 110 aa11.21□□□□□ -0.62
HDAC6-220ENST00000477528 CRIP1P50238 77 aa11.2□□□□□ -0.62
HDAC6-220ENST00000477528 SPATA12Q7Z6I5 190 aa11.2□□□□□ -0.62
HDAC6-220ENST00000477528 PRSS29PA6NIE9 313 aa11.2□□□□□ -0.62
HDAC6-220ENST00000477528 MORN3Q6PF18 240 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-220ENST00000477528 CEP295Q9C0D2 2601 aa11.2□□□□□ -0.62
HDAC6-220ENST00000477528 DLX4Q92988 240 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-220ENST00000477528 PRB1P04280 392 aa11.19□□□□□ -0.62
HDAC6-220ENST00000477528 CEND1Q8N111 149 aa11.19□□□□□ -0.62
HDAC6-220ENST00000477528 SMAD5-AS1Q9Y6J3 95 aa11.19□□□□□ -0.62
HDAC6-220ENST00000477528 DNAL4O96015 105 aa11.19□□□□□ -0.62
HDAC6-220ENST00000477528 RHOHQ15669 191 aa11.19□□□□□ -0.62
HDAC6-220ENST00000477528 OR13C6PQ8NH95 151 aa11.19□□□□□ -0.62
HDAC6-220ENST00000477528 RASL10AQ92737 203 aa11.19□□□□□ -0.62
HDAC6-220ENST00000477528 PCSK5Q92824 1860 aa11.19□□□□□ -0.62
HDAC6-220ENST00000477528 PIEZO1Q92508 2521 aa11.18□□□□□ -0.62
HDAC6-220ENST00000477528 ATRXP46100 2492 aa11.18□□□□□ -0.62
HDAC6-220ENST00000477528 Q6ZVH6 145 aa11.18□□□□□ -0.62
HDAC6-220ENST00000477528 CST9LQ9H4G1 147 aa11.18□□□□□ -0.62
HDAC6-220ENST00000477528 DEFB136Q30KP8 78 aa11.18□□□□□ -0.62
HDAC6-220ENST00000477528 M0R2P5 195 aa11.18□□□□□ -0.62
HDAC6-220ENST00000477528 BRCA2P51587 3418 aa11.18□□□□□ -0.62
HDAC6-220ENST00000477528 TRBV7-9A0A0J9YWB2 115 aa11.18□□□□□ -0.62
HDAC6-220ENST00000477528 K7EP34 96 aa11.18□□□□□ -0.62
HDAC6-220ENST00000477528 DEFB1P60022 68 aa11.18□□□□□ -0.62
HDAC6-220ENST00000477528 SUMO4Q6EEV6 95 aa11.18□□□□□ -0.62
HDAC6-220ENST00000477528 TANC2Q9HCD6 1990 aa11.17□□□□□ -0.62
HDAC6-220ENST00000477528 IGHV4OR15-8A0A075B7B6 117 aa11.17□□□□□ -0.62
HDAC6-220ENST00000477528 A0A087WW49 117 aa11.17□□□□□ -0.62
HDAC6-220ENST00000477528 LOXL1Q08397 574 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-220ENST00000477528 IGHV3-16A0A0C4DH30 117 aa11.17□□□□□ -0.62
HDAC6-220ENST00000477528 SLURP1P55000 103 aa11.17□□□□□ -0.62
HDAC6-220ENST00000477528 A0A1W2PPM0 123 aa11.16□□□□□ -0.62
HDAC6-220ENST00000477528 OCIAD2Q56VL3 154 aa11.16□□□□□ -0.62
HDAC6-220ENST00000477528 AZU1P20160 251 aa11.16□□□□□ -0.62
HDAC6-220ENST00000477528 A0A0U1RRA0 63 aa11.16□□□□□ -0.62
HDAC6-220ENST00000477528 RIPPLY3P57055 190 aa11.16□□□□□ -0.62
HDAC6-220ENST00000477528 TRANK1O15050 2925 aa11.16□□□□□ -0.62
HDAC6-220ENST00000477528 TRBV25-1A0A075B6N4 114 aa11.15□□□□□ -0.62
HDAC6-220ENST00000477528 CSPG4Q6UVK1 2322 aa11.15□□□□□ -0.62
HDAC6-220ENST00000477528 RNF114Q9Y508 228 aa11.15□□□□□ -0.62
HDAC6-220ENST00000477528 IGHG4P01861 327 aa11.15□□□□□ -0.63
HDAC6-220ENST00000477528 BOD1L2Q8IYS8 172 aa11.15□□□□□ -0.63
HDAC6-220ENST00000477528 DOPEY2Q9Y3R5 2298 aa11.14□□□□□ -0.63
HDAC6-220ENST00000477528 TRAV13-1A0A0B4J241 112 aa11.14□□□□□ -0.63
HDAC6-220ENST00000477528 TRAV12-1A0A0B4J245 112 aa11.14□□□□□ -0.63
HDAC6-220ENST00000477528 ARHGAP32A7KAX9 2087 aa11.14□□□□□ -0.63
HDAC6-220ENST00000477528 MKI67P46013 3256 aaKnown RBP11.14□□□□□ -0.63
HDAC6-220ENST00000477528 ODF1Q14990 250 aa11.14□□□□□ -0.63
HDAC6-220ENST00000477528 J3QQQ9 107 aa11.14□□□□□ -0.63
HDAC6-220ENST00000477528 HTN3P15516 51 aa11.14□□□□□ -0.63
HDAC6-220ENST00000477528 ADAMTSL5Q6ZMM2 481 aa11.14□□□□□ -0.63
HDAC6-220ENST00000477528 ZFP2Q6ZN57 461 aa11.14□□□□□ -0.63
HDAC6-220ENST00000477528 RANBP2P49792 3224 aaKnown RBP11.14□□□□□ -0.63
HDAC6-220ENST00000477528 NPC2P61916 151 aa11.14□□□□□ -0.63
HDAC6-220ENST00000477528 CFAP161Q6P656 301 aa11.14□□□□□ -0.63
HDAC6-220ENST00000477528 SPAG8Q99932 426 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-220ENST00000477528 LINC00310P59036 64 aa11.13□□□□□ -0.63
HDAC6-220ENST00000477528 ZNRF2Q8NHG8 242 aa11.13□□□□□ -0.63
HDAC6-220ENST00000477528 K7ERJ3 54 aa11.13□□□□□ -0.63
HDAC6-220ENST00000477528 Q8N1Y9 231 aa11.13□□□□□ -0.63
HDAC6-220ENST00000477528 TOMM6Q96B49 74 aa11.13□□□□□ -0.63
HDAC6-220ENST00000477528 SIGMAR1Q99720 223 aa11.13□□□□□ -0.63
HDAC6-220ENST00000477528 TRAV8-2A0A0B4J237 113 aa11.12□□□□□ -0.63
HDAC6-220ENST00000477528 RNF152Q8N8N0 203 aa11.12□□□□□ -0.63
HDAC6-220ENST00000477528 U3KQK5 164 aa11.12□□□□□ -0.63
HDAC6-220ENST00000477528 GAGE12JA6NER3 117 aa11.12□□□□□ -0.63
HDAC6-220ENST00000477528 GAGE4Q13068 117 aa11.12□□□□□ -0.63
HDAC6-220ENST00000477528 GAGE5Q13069 117 aa11.12□□□□□ -0.63
HDAC6-220ENST00000477528 IGHV3-38A0A0C4DH36 116 aa11.12□□□□□ -0.63
HDAC6-220ENST00000477528 K7EP13 123 aa11.12□□□□□ -0.63
HDAC6-220ENST00000477528 CCL25O15444 150 aa11.12□□□□□ -0.63
HDAC6-220ENST00000477528 HIGD1BQ9P298 99 aa11.12□□□□□ -0.63
HDAC6-220ENST00000477528 A0A0J9YX75 114 aa11.12□□□□□ -0.63
HDAC6-220ENST00000477528 VWC2LB2RUY7 222 aa11.11□□□□□ -0.63
HDAC6-220ENST00000477528 C12orf74Q32Q52 190 aa11.11□□□□□ -0.63
HDAC6-220ENST00000477528 J3QKU1 62 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms