RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	BCE1	O60756	84 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	NDUFC2	O95298	119 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	CCL3	P10147	92 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	PSMB8	P28062	276 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	GNG5	P63218	68 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	CCL8	P80075	99 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	MRPS36	P82909	103 aa	Known RBP	3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	LOXL1	Q08397	574 aa	Predicted RBP	3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	KLRB1	Q12918	225 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	ANXA2R	Q3ZCQ2	193 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	SPINK14	Q6IE38	97 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	C2orf82	Q6UX34	121 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	SDIM1	Q6ZPB5	146 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	C5orf38	Q86SI9	138 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	TRPT1	Q86TN4	253 aa	Known RBP	3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	MDS2	Q8NDY4	140 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	C1orf162	Q8NEQ5	155 aa	Predicted RBP	3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	TMEM167A	Q8TBQ9	72 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	DPH3	Q96FX2	82 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	SRSF8	Q9BRL6	282 aa	Known RBP	3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	LINC00574	Q9H8X3	128 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	EDA2R	Q9HAV5	297 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	MED12	Q93074	2177 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	PCNX1	Q96RV3	2341 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	CFAP47	Q6ZTR5	3102 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	DIDO1	Q9BTC0	2240 aa	Known RBP	3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGLV2-18	A0A075B6J9	118 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	TRGV11	A0A075B6L2	103 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	TRAV3	A0A0B4J244	114 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520		A0A0J9YX75	114 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520		A0A0J9YY99	117 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	FAM236A	A0A1B0GUQ0	79 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	FAM236B	A0A1B0GV22	79 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	SDHAF1	A6NFY7	115 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	LINC01548	A6NM66	108 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGHV3-30	P01768	117 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGHV3-33	P01772	117 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGHV3-30-5	P0DP03	117 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	COX6B1	P14854	86 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	CD24	P25063	80 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	HOXA4	Q00056	320 aa	Predicted RBP	3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	ZNF56	Q15929	161 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	TMEM155	Q4W5P6	130 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	FAM201A	Q5SY85	155 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	GOLT1A	Q6ZVE7	132 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	IL17REL	Q6ZVW7	336 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	DAND5	Q8N907	189 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	TOMM6	Q96B49	74 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	PLEKHB2	Q96CS7	222 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	ASCL2	Q99929	193 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	CHCHD5	Q9BSY4	110 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	PEMT	Q9UBM1	199 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	MYO7B	Q6PIF6	2116 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	LOC400499	M0QZD8	3231 aa		3.61	□□□□□ -1.83
PTCD3-212	ENST00000477520	SPTBN1	Q01082	2364 aa	Known RBP	3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	TRBV19	A0A075B6N1	114 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGHV4-4	A0A075B6R2	117 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGKV1D-37	A0A075B6S9	117 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	C11orf86	A6NJI1	115 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520		M0R381	172 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	WNT9B	O14905	357 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	PLAU	P00749	431 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	INAFM2	P0DMQ5	153 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	CGB3	P0DN86	165 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	CGB7	P0DN87	165 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	PRDX2	P32119	198 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	HIST1H4A	P62805	103 aa	Known RBP	3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	ZNF672	Q499Z4	452 aa	Predicted RBP	3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	MORN5	Q5VZ52	161 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	KRTAP5-1	Q6L8H4	278 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520		Q6ZQT7	251 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	SERP2	Q8N6R1	65 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	C8orf31	Q8N9H6	132 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520		Q8NA96	180 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	NEXN-AS1	Q8NBZ9	246 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	RNF185	Q96GF1	192 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	TMEM141	Q96I45	108 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	SCGB3A1	Q96QR1	104 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	PRR25	Q96S07	402 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	METTL26	Q96S19	204 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	SLC50A1	Q9BRV3	221 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	HES7	Q9BYE0	225 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	SRXN1	Q9BYN0	137 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	PROK2	Q9HC23	129 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	LAMTOR3	Q9UHA4	124 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGSF10	Q6WRI0	2623 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	ATM	Q13315	3056 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	CELSR3	Q9NYQ7	3312 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	TANC2	Q9HCD6	1990 aa		3.6	□□□□□ -1.83
PTCD3-212	ENST00000477520	ALPK2	Q86TB3	2170 aa		3.59	□□□□□ -1.83
PTCD3-212	ENST00000477520	CHD6	Q8TD26	2715 aa		3.59	□□□□□ -1.83
PTCD3-212	ENST00000477520	ITPR1	Q14643	2758 aa		3.59	□□□□□ -1.83
PTCD3-212	ENST00000477520	TRGV5	A0A0B4J1U4	118 aa		3.59	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGHV3-15	A0A0B4J1V0	119 aa		3.59	□□□□□ -1.83
PTCD3-212	ENST00000477520	TRAV13-1	A0A0B4J241	112 aa		3.59	□□□□□ -1.83
PTCD3-212	ENST00000477520	RBAKDN	A6NC62	111 aa		3.59	□□□□□ -1.83
PTCD3-212	ENST00000477520	C17orf100	A8MU93	164 aa		3.59	□□□□□ -1.83
PTCD3-212	ENST00000477520	OOSP1	A8MZH6	123 aa		3.59	□□□□□ -1.83
PTCD3-212	ENST00000477520	RS1	O15537	224 aa		3.59	□□□□□ -1.83
PTCD3-212	ENST00000477520	SH2D1A	O60880	128 aa		3.59	□□□□□ -1.83

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