RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 SH2D1AO60880 128 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 CXCL1P09341 107 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 SFTA3P0C7M3 94 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 HOXA5P20719 270 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 CEBPGP53567 150 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 CCL18P55774 89 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 TMEM241Q24JQ0 296 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 LINC01559Q495D7 138 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 FAM231DQ6ZW35 169 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 LINC01551Q86U37 167 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 NHLRC2Q8NBF2 726 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 NAT8Q9UHE5 227 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 PRO0255Q9UI72 69 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 NAGKQ9UJ70 344 aa8.64□□□□□ -1.03
CLCNKA-205ENST00000477360 KMT2AQ03164 3969 aa8.63□□□□□ -1.03
CLCNKA-205ENST00000477360 DNAH6Q9C0G6 4158 aa8.63□□□□□ -1.03
CLCNKA-205ENST00000477360 TRAV26-1A0A087WT03 109 aa8.63□□□□□ -1.03
CLCNKA-205ENST00000477360 TRAV4A0A0B4J268 109 aa8.63□□□□□ -1.03
CLCNKA-205ENST00000477360 TMEM218A2RU14 115 aa8.63□□□□□ -1.03
CLCNKA-205ENST00000477360 PGPEP1LA6NFU8 196 aa8.63□□□□□ -1.03
CLCNKA-205ENST00000477360 K7EN84 100 aa8.63□□□□□ -1.03
CLCNKA-205ENST00000477360 GNRH2O43555 120 aa8.63□□□□□ -1.03
CLCNKA-205ENST00000477360 OR5I1Q13606 314 aa8.63□□□□□ -1.03
CLCNKA-205ENST00000477360 C9orf85Q96MD7 179 aa8.63□□□□□ -1.03
CLCNKA-205ENST00000477360 MUC4Q99102 2169 aa8.62□□□□□ -1.03
CLCNKA-205ENST00000477360 IGKV3D-20A0A0C4DH25 116 aa8.62□□□□□ -1.03
CLCNKA-205ENST00000477360 KRBOX1C9JBD0 128 aa8.62□□□□□ -1.03
CLCNKA-205ENST00000477360 MGST1P10620 155 aaKnown RBP8.62□□□□□ -1.03
CLCNKA-205ENST00000477360 UBE2DNLQ8IWF7 75 aa8.62□□□□□ -1.03
CLCNKA-205ENST00000477360 MRPL16Q9NX20 251 aaKnown RBP8.62□□□□□ -1.03
CLCNKA-205ENST00000477360 IL36BQ9NZH7 164 aa8.62□□□□□ -1.03
CLCNKA-205ENST00000477360 HHLA3Q9XRX5 114 aa8.62□□□□□ -1.03
CLCNKA-205ENST00000477360 HYDINQ4G0P3 5121 aa8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 ORM1P02763 201 aa8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 RPL23P62829 140 aaKnown RBP8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 PNRC1Q12796 327 aaPredicted RBP8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 FHL2Q14192 279 aa8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 PRR27Q6MZM9 219 aa8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 SH2D6Q7Z4S9 175 aa8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 ZNF575Q86XF7 245 aa8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 DAZAP1Q96EP5 407 aaKnown RBP8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 VSIG2Q96IQ7 327 aa8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 UPK3BQ9BT76 320 aa8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 SEC11CQ9BY50 192 aa8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 OSTCQ9NRP0 149 aa8.61□□□□□ -1.03
CLCNKA-205ENST00000477360 B4DEV8 164 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 NUDT3O95989 172 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 MED14OSP0DP75 135 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 BTF3P20290 206 aaKnown RBP8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 ASIPP42127 132 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 CRYBA4P53673 196 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 RPS20P60866 119 aaKnown RBP8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 NDUFA5Q16718 116 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 ZNF876PQ49A33 203 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 CT83Q5H943 113 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 C10orf91Q5T1B1 145 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 NUDT10Q8NFP7 164 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 OR4C5Q8NGB2 326 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 ISOC2Q96AB3 205 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 NUDT11Q96G61 164 aa8.6□□□□□ -1.03
CLCNKA-205ENST00000477360 PAX4O43316 350 aa8.59□□□□□ -1.03
CLCNKA-205ENST00000477360 P01737 135 aa8.59□□□□□ -1.03
CLCNKA-205ENST00000477360 ADCYAP1P18509 176 aa8.59□□□□□ -1.03
CLCNKA-205ENST00000477360 S100A4P26447 101 aaKnown RBP8.59□□□□□ -1.03
CLCNKA-205ENST00000477360 MRPL23Q16540 153 aaKnown RBP8.59□□□□□ -1.03
CLCNKA-205ENST00000477360 ZFP2Q6ZN57 461 aa8.59□□□□□ -1.03
CLCNKA-205ENST00000477360 ICOSQ9Y6W8 199 aa8.59□□□□□ -1.03
CLCNKA-205ENST00000477360 TRGV4A0A0C4DH28 118 aa8.58□□□□□ -1.04
CLCNKA-205ENST00000477360 XKRY2A2RUG3 117 aa8.58□□□□□ -1.04
CLCNKA-205ENST00000477360 A8MWV9 139 aa8.58□□□□□ -1.04
CLCNKA-205ENST00000477360 F8W036 122 aa8.58□□□□□ -1.04
CLCNKA-205ENST00000477360 RS1O15537 224 aa8.58□□□□□ -1.04
CLCNKA-205ENST00000477360 Q6ZR54 194 aa8.58□□□□□ -1.04
CLCNKA-205ENST00000477360 LINC00336Q6ZUF6 198 aa8.58□□□□□ -1.04
CLCNKA-205ENST00000477360 ZNRF2Q8NHG8 242 aa8.58□□□□□ -1.04
CLCNKA-205ENST00000477360 SCRT2Q9NQ03 307 aa8.58□□□□□ -1.04
CLCNKA-205ENST00000477360 CARHSP1Q9Y2V2 147 aaKnown RBP8.58□□□□□ -1.04
CLCNKA-205ENST00000477360 MRPS16Q9Y3D3 137 aaKnown RBP8.58□□□□□ -1.04
CLCNKA-205ENST00000477360 NACAE9PAV3 2078 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 A0A096LPF7 62 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 A0A0J9YY99 117 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 A0A1W2PPQ1 181 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 K7EP13 123 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 M0R036 132 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 SNAI2O43623 268 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 OR5AL1P0C617 328 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 TIRAPP58753 221 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 ADIRFQ15847 76 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 SYT8Q8NBV8 401 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 OR2D3Q8NGH3 330 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 SFRP2Q96HF1 295 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 ZNF479Q96JC4 524 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 SSBP4Q9BWG4 385 aaPredicted RBP8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 RNASE7Q9H1E1 156 aaKnown RBP8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 RPP21Q9H633 154 aaKnown RBP8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 LINC00588Q9Y4M8 146 aa8.57□□□□□ -1.04
CLCNKA-205ENST00000477360 FAM231BA6NCW3 169 aa8.56□□□□□ -1.04
CLCNKA-205ENST00000477360 GATCO43716 136 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms