RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 COA6Q5JTJ3 125 aaKnown RBP10.56□□□□□ -0.72
COL4A6-206ENST00000477085 TMEM158Q8WZ71 300 aa10.56□□□□□ -0.72
COL4A6-206ENST00000477085 XCL2Q9UBD3 114 aa10.56□□□□□ -0.72
COL4A6-206ENST00000477085 COL6A5A8TX70 2615 aa10.55□□□□□ -0.72
COL4A6-206ENST00000477085 NOTCH3Q9UM47 2321 aa10.55□□□□□ -0.72
COL4A6-206ENST00000477085 IGHV3-16A0A0C4DH30 117 aa10.55□□□□□ -0.72
COL4A6-206ENST00000477085 WIPF1O43516 503 aa10.55□□□□□ -0.72
COL4A6-206ENST00000477085 KCNS1Q96KK3 526 aa10.55□□□□□ -0.72
COL4A6-206ENST00000477085 LOC102724200A0A096LPH7 203 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-206ENST00000477085 RPL35AP18077 110 aaKnown RBP10.54□□□□□ -0.72
COL4A6-206ENST00000477085 S100A4P26447 101 aaKnown RBP10.54□□□□□ -0.72
COL4A6-206ENST00000477085 SRIP30626 198 aa10.54□□□□□ -0.72
COL4A6-206ENST00000477085 AMN1Q8IY45 258 aa10.54□□□□□ -0.72
COL4A6-206ENST00000477085 C1orf158Q8N1D5 194 aa10.54□□□□□ -0.72
COL4A6-206ENST00000477085 ALKBH7Q9BT30 221 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-206ENST00000477085 MCRIP2Q9BUT9 160 aaKnown RBP10.54□□□□□ -0.72
COL4A6-206ENST00000477085 PKD1L1Q8TDX9 2849 aa10.54□□□□□ -0.72
COL4A6-206ENST00000477085 NUPR1O60356 82 aa10.54□□□□□ -0.72
COL4A6-206ENST00000477085 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
COL4A6-206ENST00000477085 DMRTA1Q5VZB9 504 aa10.54□□□□□ -0.72
COL4A6-206ENST00000477085 RNF185Q96GF1 192 aa10.54□□□□□ -0.72
COL4A6-206ENST00000477085 ANK2Q01484 3957 aa10.53□□□□□ -0.72
COL4A6-206ENST00000477085 EVI2AP22794 236 aa10.53□□□□□ -0.72
COL4A6-206ENST00000477085 LINC00310P59036 64 aa10.53□□□□□ -0.72
COL4A6-206ENST00000477085 FAM104BQ5XKR9 115 aa10.53□□□□□ -0.72
COL4A6-206ENST00000477085 TMEM256Q8N2U0 113 aa10.53□□□□□ -0.72
COL4A6-206ENST00000477085 C9orf85Q96MD7 179 aa10.53□□□□□ -0.72
COL4A6-206ENST00000477085 TMEM191AQ9H0A3 160 aa10.53□□□□□ -0.72
COL4A6-206ENST00000477085 M0R381 172 aa10.52□□□□□ -0.72
COL4A6-206ENST00000477085 HTN1P15515 57 aa10.52□□□□□ -0.72
COL4A6-206ENST00000477085 S100A2P29034 98 aa10.52□□□□□ -0.72
COL4A6-206ENST00000477085 CACNG7P62955 275 aa10.52□□□□□ -0.72
COL4A6-206ENST00000477085 OXLD1Q5BKU9 147 aa10.52□□□□□ -0.72
COL4A6-206ENST00000477085 PDZD11Q5EBL8 140 aa10.52□□□□□ -0.72
COL4A6-206ENST00000477085 SPANXN1Q5VSR9 72 aa10.52□□□□□ -0.72
COL4A6-206ENST00000477085 NXPH4O95158 308 aa10.52□□□□□ -0.73
COL4A6-206ENST00000477085 GAS8-AS1O95177 125 aa10.52□□□□□ -0.73
COL4A6-206ENST00000477085 INSP01308 110 aa10.52□□□□□ -0.73
COL4A6-206ENST00000477085 Q0VG73 95 aa10.52□□□□□ -0.73
COL4A6-206ENST00000477085 MRPL51Q4U2R6 128 aaKnown RBP10.52□□□□□ -0.73
COL4A6-206ENST00000477085 PHLDA3Q9Y5J5 127 aa10.52□□□□□ -0.73
COL4A6-206ENST00000477085 MUC4Q99102 2169 aa10.51□□□□□ -0.73
COL4A6-206ENST00000477085 CBY3A6NI87 242 aa10.51□□□□□ -0.73
COL4A6-206ENST00000477085 RAB4AP20338 218 aa10.51□□□□□ -0.73
COL4A6-206ENST00000477085 IQCJQ1A5X6 159 aa10.51□□□□□ -0.73
COL4A6-206ENST00000477085 GTSCR1Q86UQ5 136 aa10.51□□□□□ -0.73
COL4A6-206ENST00000477085 CSNK1G2-AS1Q8NCQ2 148 aa10.51□□□□□ -0.73
COL4A6-206ENST00000477085 C18orf32Q8TCD1 76 aa10.51□□□□□ -0.73
COL4A6-206ENST00000477085 LINC01587Q99440 93 aa10.51□□□□□ -0.73
COL4A6-206ENST00000477085 AMBPP02760 352 aa10.5□□□□□ -0.73
COL4A6-206ENST00000477085 AZU1P20160 251 aa10.5□□□□□ -0.73
COL4A6-206ENST00000477085 HIST1H2BLQ99880 126 aa10.5□□□□□ -0.73
COL4A6-206ENST00000477085 C20orf144Q9BQM9 153 aa10.5□□□□□ -0.73
COL4A6-206ENST00000477085 LINC00467Q9BRT7 94 aa10.5□□□□□ -0.73
COL4A6-206ENST00000477085 U3KQK5 164 aa10.5□□□□□ -0.73
COL4A6-206ENST00000477085 FABP4P15090 132 aa10.49□□□□□ -0.73
COL4A6-206ENST00000477085 NUTF2P61970 127 aaKnown RBP10.49□□□□□ -0.73
COL4A6-206ENST00000477085 RCHY1Q96PM5 261 aa10.49□□□□□ -0.73
COL4A6-206ENST00000477085 JPT2Q9H910 190 aa10.49□□□□□ -0.73
COL4A6-206ENST00000477085 SMKR1H3BMG3 65 aa10.49□□□□□ -0.73
COL4A6-206ENST00000477085 KRTAP10-11P60412 298 aa10.49□□□□□ -0.73
COL4A6-206ENST00000477085 C11orf72Q8NBR9 251 aa10.49□□□□□ -0.73
COL4A6-206ENST00000477085 OR10D4PQ8NGN7 298 aa10.49□□□□□ -0.73
COL4A6-206ENST00000477085 MDFIQ99750 246 aa10.49□□□□□ -0.73
COL4A6-206ENST00000477085 TRGV11A0A075B6L2 103 aa10.48□□□□□ -0.73
COL4A6-206ENST00000477085 IGHV3OR16-12A0A075B7B8 117 aa10.48□□□□□ -0.73
COL4A6-206ENST00000477085 D6R8Y8 96 aa10.48□□□□□ -0.73
COL4A6-206ENST00000477085 OR10J3Q5JRS4 329 aa10.48□□□□□ -0.73
COL4A6-206ENST00000477085 C14orf178Q8N769 122 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-206ENST00000477085 URB1-AS1Q96HZ7 61 aa10.48□□□□□ -0.73
COL4A6-206ENST00000477085 PACRGQ96M98 296 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-206ENST00000477085 KIF25-AS1Q9Y6Z4 181 aa10.48□□□□□ -0.73
COL4A6-206ENST00000477085 SERF1AO75920 110 aa10.47□□□□□ -0.73
COL4A6-206ENST00000477085 LINC00315P59091 139 aa10.47□□□□□ -0.73
COL4A6-206ENST00000477085 PYY3Q5JQD4 70 aa10.47□□□□□ -0.73
COL4A6-206ENST00000477085 GSN-AS1Q9NRJ2 163 aa10.47□□□□□ -0.73
COL4A6-206ENST00000477085 NCR2O95944 276 aa10.47□□□□□ -0.73
COL4A6-206ENST00000477085 GATA1P15976 413 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-206ENST00000477085 MORN3Q6PF18 240 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-206ENST00000477085 BAGE3Q86Y29 109 aa10.47□□□□□ -0.73
COL4A6-206ENST00000477085 CSTL1Q9H114 145 aa10.46□□□□□ -0.74
COL4A6-206ENST00000477085 NIT2Q9NQR4 276 aa10.46□□□□□ -0.74
COL4A6-206ENST00000477085 TRAV26-2A0A0B4J265 109 aa10.45□□□□□ -0.74
COL4A6-206ENST00000477085 PCP4L1A6NKN8 68 aa10.45□□□□□ -0.74
COL4A6-206ENST00000477085 TMEM208Q9BTX3 173 aa10.45□□□□□ -0.74
COL4A6-206ENST00000477085 SAMD10Q9BYL1 202 aa10.45□□□□□ -0.74
COL4A6-206ENST00000477085 DNAH3Q8TD57 4116 aa10.45□□□□□ -0.74
COL4A6-206ENST00000477085 ESDP10768 282 aa10.44□□□□□ -0.74
COL4A6-206ENST00000477085 CKS2P33552 79 aa10.44□□□□□ -0.74
COL4A6-206ENST00000477085 ZNF876PQ49A33 203 aa10.44□□□□□ -0.74
COL4A6-206ENST00000477085 ZNF705AQ6ZN79 300 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-206ENST00000477085 ORMDL3Q8N138 153 aa10.44□□□□□ -0.74
COL4A6-206ENST00000477085 PRELID3AQ96N28 172 aa10.44□□□□□ -0.74
COL4A6-206ENST00000477085 A0A087WWL8 130 aa10.44□□□□□ -0.74
COL4A6-206ENST00000477085 NPYP01303 97 aa10.44□□□□□ -0.74
COL4A6-206ENST00000477085 EGFEM1PQ0D2K5 195 aa10.44□□□□□ -0.74
COL4A6-206ENST00000477085 SMIM15Q7Z3B0 74 aa10.44□□□□□ -0.74
COL4A6-206ENST00000477085 NIT1Q86X76 327 aa10.44□□□□□ -0.74
COL4A6-206ENST00000477085 POM121L12Q8N7R1 296 aa10.44□□□□□ -0.74
COL4A6-206ENST00000477085 IL17DQ8TAD2 202 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms