RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 KRTAP26-1Q6PEX3 210 aa3.24□□□□□ -1.89
NUP58-209ENST00000476553 COL11A1P12107 1806 aaPredicted RBP3.23□□□□□ -1.89
NUP58-209ENST00000476553 CBLN1P23435 193 aa3.23□□□□□ -1.89
NUP58-209ENST00000476553 CLECL1Q8IZS7 167 aa3.23□□□□□ -1.89
NUP58-209ENST00000476553 CMTM2Q8TAZ6 248 aa3.23□□□□□ -1.89
NUP58-209ENST00000476553 PPDPFLQ8WWR9 84 aa3.23□□□□□ -1.89
NUP58-209ENST00000476553 TRPM7Q96QT4 1865 aa3.23□□□□□ -1.89
NUP58-209ENST00000476553 ANAPC11Q9NYG5 84 aa3.23□□□□□ -1.89
NUP58-209ENST00000476553 CCL26Q9Y258 94 aa3.23□□□□□ -1.89
NUP58-209ENST00000476553 DOCK1Q14185 1865 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 ARAP2Q8WZ64 1704 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 EML5Q05BV3 1969 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 C2orf70A6NJV1 201 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 GNGT2O14610 69 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 CTSGP08311 255 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 ASIPP42127 132 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 PDE6HQ13956 83 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 Q1T7F1 81 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 SLC48A1Q6P1K1 146 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 COMMD6Q7Z4G1 85 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 ZNF431Q8TF32 576 aaPredicted RBP3.22□□□□□ -1.89
NUP58-209ENST00000476553 LINC00167Q96N53 147 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 SLIT3O75094 1523 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 ANKRD36BQ8N2N9 1353 aa3.22□□□□□ -1.89
NUP58-209ENST00000476553 TOPAZ1Q8N9V7 1692 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 SCAPERQ9BY12 1400 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 IGKV1D-17A0A075B6S4 117 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 TRAV17A0A0B4J275 112 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 UBE2G1P62253 170 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 RHOHQ15669 191 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 KIAA2026Q5HYC2 2103 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.21□□□□□ -1.9
NUP58-209ENST00000476553 MED9Q9NWA0 146 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 PLXNA2O75051 1894 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 LRP5O75197 1615 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 MAGI2Q86UL8 1455 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 IFT140Q96RY7 1462 aa3.21□□□□□ -1.9
NUP58-209ENST00000476553 LAMB2P55268 1798 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 CACNA1DQ01668 2161 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 A6NIN4 97 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 K7EP34 96 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 CCKP06307 115 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 SLC25A6P12236 298 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 POLR2JP52435 117 aaKnown RBP3.2□□□□□ -1.9
NUP58-209ENST00000476553 MOBPQ13875 183 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 C9orf116Q5BN46 136 aaPredicted RBP3.2□□□□□ -1.9
NUP58-209ENST00000476553 RPL7L1Q6DKI1 246 aaKnown RBP3.2□□□□□ -1.9
NUP58-209ENST00000476553 C15orf53Q8NAA6 179 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 PMCHL2Q9BQD1 86 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 ZSWIM8A7E2V4 1837 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 SBF2Q86WG5 1849 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 DNMBPQ6XZF7 1577 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 DIDO1Q9BTC0 2240 aaKnown RBP3.2□□□□□ -1.9
NUP58-209ENST00000476553 CUL9Q8IWT3 2517 aa3.2□□□□□ -1.9
NUP58-209ENST00000476553 UACAQ9BZF9 1416 aa3.19□□□□□ -1.9
NUP58-209ENST00000476553 TRIOBPQ9H2D6 2365 aa3.19□□□□□ -1.9
NUP58-209ENST00000476553 MARF1Q9Y4F3 1742 aaKnown RBP3.19□□□□□ -1.9
NUP58-209ENST00000476553 GYPAP02724 150 aa3.19□□□□□ -1.9
NUP58-209ENST00000476553 PEA15Q15121 130 aa3.19□□□□□ -1.9
NUP58-209ENST00000476553 OR10AG1Q8NH19 301 aa3.19□□□□□ -1.9
NUP58-209ENST00000476553 C10orf82Q8WW14 230 aa3.19□□□□□ -1.9
NUP58-209ENST00000476553 MRPL35Q9NZE8 188 aaKnown RBP3.19□□□□□ -1.9
NUP58-209ENST00000476553 PTPRMP28827 1452 aa3.19□□□□□ -1.9
NUP58-209ENST00000476553 PARP14Q460N5 1801 aa3.19□□□□□ -1.9
NUP58-209ENST00000476553 TNRC6AQ8NDV7 1962 aaKnown RBP3.18□□□□□ -1.9
NUP58-209ENST00000476553 F8W1H4 67 aa3.18□□□□□ -1.9
NUP58-209ENST00000476553 ELOBQ15370 118 aa3.18□□□□□ -1.9
NUP58-209ENST00000476553 FAM74A1Q5RGS3 127 aa3.18□□□□□ -1.9
NUP58-209ENST00000476553 LYPD1Q8N2G4 141 aa3.18□□□□□ -1.9
NUP58-209ENST00000476553 TIMM21Q9BVV7 248 aa3.18□□□□□ -1.9
NUP58-209ENST00000476553 ANK1P16157 1881 aa3.18□□□□□ -1.9
NUP58-209ENST00000476553 LAMB1P07942 1786 aa3.17□□□□□ -1.9
NUP58-209ENST00000476553 LAMC3Q9Y6N6 1575 aa3.17□□□□□ -1.9
NUP58-209ENST00000476553 hADV29S1A0JD25 119 aa3.17□□□□□ -1.9
NUP58-209ENST00000476553 IGKCP01834 107 aa3.17□□□□□ -1.9
NUP58-209ENST00000476553 PRB4P10163 310 aaPredicted RBP3.17□□□□□ -1.9
NUP58-209ENST00000476553 CNBPP62633 177 aaKnown RBP3.17□□□□□ -1.9
NUP58-209ENST00000476553 C1orf137Q5JT78 98 aa3.17□□□□□ -1.9
NUP58-209ENST00000476553 UNQ5815/PRO19632Q6UWF5 114 aa3.17□□□□□ -1.9
NUP58-209ENST00000476553 PLXNA4Q9HCM2 1894 aa3.17□□□□□ -1.9
NUP58-209ENST00000476553 CXorf51AA0A1B0GTR3 108 aa3.16□□□□□ -1.9
NUP58-209ENST00000476553 IGHV3-33P01772 117 aa3.16□□□□□ -1.9
NUP58-209ENST00000476553 KRTDAPP60985 99 aa3.16□□□□□ -1.9
NUP58-209ENST00000476553 IGFBP7Q16270 282 aa3.16□□□□□ -1.9
NUP58-209ENST00000476553 C4orf3Q8WVX3 66 aa3.16□□□□□ -1.9
NUP58-209ENST00000476553 TSLPQ969D9 159 aa3.16□□□□□ -1.9
NUP58-209ENST00000476553 FREM3P0C091 2139 aa3.16□□□□□ -1.9
NUP58-209ENST00000476553 SHROOM2Q13796 1616 aa3.15□□□□□ -1.9
NUP58-209ENST00000476553 SDK2Q58EX2 2172 aa3.15□□□□□ -1.9
NUP58-209ENST00000476553 LAMB4A4D0S4 1761 aa3.15□□□□□ -1.9
NUP58-209ENST00000476553 PRDM15P57071 1507 aaPredicted RBP3.15□□□□□ -1.9
NUP58-209ENST00000476553 IGKV2-28A0A075B6P5 120 aa3.15□□□□□ -1.91
NUP58-209ENST00000476553 TRBV7-7A0A0K0K1E9 115 aa3.15□□□□□ -1.91
NUP58-209ENST00000476553 TRBV10-3A0A0K0K1G6 114 aa3.15□□□□□ -1.91
NUP58-209ENST00000476553 ATOX1O00244 68 aa3.15□□□□□ -1.91
NUP58-209ENST00000476553 IGKV2D-28P01615 120 aa3.15□□□□□ -1.91
NUP58-209ENST00000476553 NMBP08949 121 aa3.15□□□□□ -1.91
NUP58-209ENST00000476553 SPTSSBQ8NFR3 76 aa3.15□□□□□ -1.91
NUP58-209ENST00000476553 CHD1O14646 1710 aa3.15□□□□□ -1.91
NUP58-209ENST00000476553 ERVK-7P63135 1459 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms