RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 OR11H1Q8NG94 326 aa12.13□□□□□ -0.47
VARS2-207ENST00000476162 OR11H2Q8NH07 326 aa12.13□□□□□ -0.47
VARS2-207ENST00000476162 PHLDA1Q8WV24 401 aaPredicted RBP12.13□□□□□ -0.47
VARS2-207ENST00000476162 RNF185Q96GF1 192 aa12.13□□□□□ -0.47
VARS2-207ENST00000476162 IGKV3-7A0A075B6H7 116 aa12.12□□□□□ -0.47
VARS2-207ENST00000476162 DEFB1P60022 68 aa12.12□□□□□ -0.47
VARS2-207ENST00000476162 RHPN1-AS1Q9BWJ2 59 aa12.12□□□□□ -0.47
VARS2-207ENST00000476162 ZANQ9Y493 2812 aa12.12□□□□□ -0.47
VARS2-207ENST00000476162 A0A096LNJ9 63 aa12.11□□□□□ -0.47
VARS2-207ENST00000476162 PRR9Q5T870 116 aa12.11□□□□□ -0.47
VARS2-207ENST00000476162 PCP2Q8IVA1 136 aa12.11□□□□□ -0.47
VARS2-207ENST00000476162 ZNF418Q8TF45 676 aaPredicted RBP12.11□□□□□ -0.47
VARS2-207ENST00000476162 IGHV7-4-1A0A0J9YVY3 117 aa12.11□□□□□ -0.47
VARS2-207ENST00000476162 FXYD2P54710 66 aa12.11□□□□□ -0.47
VARS2-207ENST00000476162 ETDBQ3ZM63 59 aa12.11□□□□□ -0.47
VARS2-207ENST00000476162 UBR5O95071 2799 aaPredicted RBP12.11□□□□□ -0.47
VARS2-207ENST00000476162 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 J3KRW8 73 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 J3QLI3 93 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 GAS8-AS1O95177 125 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 TCTAP57738 103 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 KRTAP10-9P60411 292 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 C10orf99Q6UWK7 81 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 DAZ1Q9NQZ3 744 aaKnown RBP12.1□□□□□ -0.47
VARS2-207ENST00000476162 PTPN13Q12923 2485 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 PSMB8P28062 276 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 FXYD7P58549 80 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 OR10J6PQ8NGY7 276 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 ZNF479Q96JC4 524 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 LINC00477Q96M19 166 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 LENEPQ9Y5L5 61 aa12.1□□□□□ -0.47
VARS2-207ENST00000476162 E9PLD3 99 aa12.09□□□□□ -0.47
VARS2-207ENST00000476162 EDN2P20800 178 aa12.09□□□□□ -0.47
VARS2-207ENST00000476162 OR8A1Q8NGG7 326 aa12.09□□□□□ -0.47
VARS2-207ENST00000476162 ZNF580Q9UK33 172 aa12.09□□□□□ -0.47
VARS2-207ENST00000476162 OVOL1O14753 267 aa12.09□□□□□ -0.47
VARS2-207ENST00000476162 GCSHP23434 173 aa12.09□□□□□ -0.47
VARS2-207ENST00000476162 F6UB75 175 aa12.08□□□□□ -0.48
VARS2-207ENST00000476162 SRD5A1P18405 259 aa12.08□□□□□ -0.48
VARS2-207ENST00000476162 EVI2AP22794 236 aa12.08□□□□□ -0.48
VARS2-207ENST00000476162 INSL3P51460 131 aa12.08□□□□□ -0.48
VARS2-207ENST00000476162 ZFAND2AQ8N6M9 145 aa12.08□□□□□ -0.48
VARS2-207ENST00000476162 K7ERJ3 54 aa12.07□□□□□ -0.48
VARS2-207ENST00000476162 NMUP48645 174 aa12.07□□□□□ -0.48
VARS2-207ENST00000476162 CACNG7P62955 275 aa12.07□□□□□ -0.48
VARS2-207ENST00000476162 HIGD1BQ9P298 99 aa12.07□□□□□ -0.48
VARS2-207ENST00000476162 GATA1P15976 413 aaPredicted RBP12.06□□□□□ -0.48
VARS2-207ENST00000476162 H3BMG7 143 aa12.06□□□□□ -0.48
VARS2-207ENST00000476162 TNFRSF6BO95407 300 aa12.06□□□□□ -0.48
VARS2-207ENST00000476162 IGHV4-31P0DP07 118 aa12.06□□□□□ -0.48
VARS2-207ENST00000476162 RNF183Q96D59 192 aa12.06□□□□□ -0.48
VARS2-207ENST00000476162 C20orf78Q9BR46 151 aa12.06□□□□□ -0.48
VARS2-207ENST00000476162 MAP1LC3AQ9H492 121 aa12.06□□□□□ -0.48
VARS2-207ENST00000476162 SS18L2Q9UHA2 77 aa12.06□□□□□ -0.48
VARS2-207ENST00000476162 PRO0461Q9UI25 63 aa12.06□□□□□ -0.48
VARS2-207ENST00000476162 ERG28Q9UKR5 140 aa12.06□□□□□ -0.48
VARS2-207ENST00000476162 CYSLTR1Q9Y271 337 aa12.06□□□□□ -0.48
VARS2-207ENST00000476162 H3BVH4 76 aa12.05□□□□□ -0.48
VARS2-207ENST00000476162 K7EMT4 169 aa12.05□□□□□ -0.48
VARS2-207ENST00000476162 HBDP02042 147 aa12.05□□□□□ -0.48
VARS2-207ENST00000476162 SPANXN1Q5VSR9 72 aa12.05□□□□□ -0.48
VARS2-207ENST00000476162 CDIP1Q9H305 208 aa12.05□□□□□ -0.48
VARS2-207ENST00000476162 ABCA12Q86UK0 2595 aa12.05□□□□□ -0.48
VARS2-207ENST00000476162 EPG5Q9HCE0 2579 aa12.05□□□□□ -0.48
VARS2-207ENST00000476162 IGLL5B9A064 214 aa12.05□□□□□ -0.48
VARS2-207ENST00000476162 SPINK8P0C7L1 97 aa12.05□□□□□ -0.48
VARS2-207ENST00000476162 SHISA2Q6UWI4 295 aa12.05□□□□□ -0.48
VARS2-207ENST00000476162 VPREB3Q9UKI3 123 aa12.05□□□□□ -0.48
VARS2-207ENST00000476162 NAV2Q8IVL1 2488 aa12.04□□□□□ -0.48
VARS2-207ENST00000476162 TRAV21A0A0B4J279 112 aa12.04□□□□□ -0.48
VARS2-207ENST00000476162 FAM19A4Q96LR4 140 aa12.04□□□□□ -0.48
VARS2-207ENST00000476162 UFC1Q9Y3C8 167 aa12.04□□□□□ -0.48
VARS2-207ENST00000476162 IGHV4-4A0A075B6R2 117 aa12.03□□□□□ -0.48
VARS2-207ENST00000476162 FSHBP01225 129 aa12.03□□□□□ -0.48
VARS2-207ENST00000476162 GAGE13Q4V321 117 aa12.03□□□□□ -0.48
VARS2-207ENST00000476162 TM2D2Q9BX73 214 aa12.03□□□□□ -0.48
VARS2-207ENST00000476162 DOPEY2Q9Y3R5 2298 aa12.03□□□□□ -0.48
VARS2-207ENST00000476162 RNASE4P34096 147 aaKnown RBP12.03□□□□□ -0.48
VARS2-207ENST00000476162 DEFB113Q30KQ7 82 aa12.03□□□□□ -0.48
VARS2-207ENST00000476162 Q6YL49 198 aa12.03□□□□□ -0.48
VARS2-207ENST00000476162 WFDC3Q8IUB2 231 aa12.03□□□□□ -0.48
VARS2-207ENST00000476162 NHP2Q9NX24 153 aaKnown RBP12.03□□□□□ -0.48
VARS2-207ENST00000476162 CHAC1Q9BUX1 264 aa12.02□□□□□ -0.48
VARS2-207ENST00000476162 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
VARS2-207ENST00000476162 TMEM89A2RUT3 159 aa12.02□□□□□ -0.49
VARS2-207ENST00000476162 SPRY2O43597 315 aa12.02□□□□□ -0.49
VARS2-207ENST00000476162 DCANP1Q8TF63 244 aa12.02□□□□□ -0.49
VARS2-207ENST00000476162 BEX4Q9NWD9 120 aaPredicted RBP12.02□□□□□ -0.49
VARS2-207ENST00000476162 LINC01546A6NGU7 62 aa12.01□□□□□ -0.49
VARS2-207ENST00000476162 MT-ATP8P03928 68 aa12.01□□□□□ -0.49
VARS2-207ENST00000476162 ANXA2RQ3ZCQ2 193 aa12.01□□□□□ -0.49
VARS2-207ENST00000476162 CEND1Q8N111 149 aa12.01□□□□□ -0.49
VARS2-207ENST00000476162 SYT8Q8NBV8 401 aa12.01□□□□□ -0.49
VARS2-207ENST00000476162 NXT2Q9NPJ8 142 aaKnown RBP12.01□□□□□ -0.49
VARS2-207ENST00000476162 MXRA5Q9NR99 2828 aa12.01□□□□□ -0.49
VARS2-207ENST00000476162 HOXA3O43365 443 aaPredicted RBP12.01□□□□□ -0.49
VARS2-207ENST00000476162 FOXI1Q12951 378 aa12.01□□□□□ -0.49
VARS2-207ENST00000476162 AMTNQ6UX39 209 aa12.01□□□□□ -0.49
VARS2-207ENST00000476162 IFI27L1Q96BM0 104 aa12.01□□□□□ -0.49
VARS2-207ENST00000476162 CR1P17927 2039 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms