RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 HIST1H1DP16402 221 aaKnown RBP2.28□□□□□ -2.04
SRGAP3-205ENST00000475560 AGPAT4-IT1Q9H0P7 198 aa2.28□□□□□ -2.04
SRGAP3-205ENST00000475560 NAA60Q9H7X0 242 aa2.28□□□□□ -2.04
SRGAP3-205ENST00000475560 A0A0C4DFX4 3053 aa2.28□□□□□ -2.05
SRGAP3-205ENST00000475560 PPRC1Q5VV67 1664 aaKnown RBP2.28□□□□□ -2.05
SRGAP3-205ENST00000475560 LAMC1P11047 1609 aa2.28□□□□□ -2.05
SRGAP3-205ENST00000475560 LMTK2Q8IWU2 1503 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 MED14O60244 1454 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 RAPGEF2Q9Y4G8 1499 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 CEP192Q8TEP8 1941 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 ANK1P16157 1881 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 C20orf202A1L168 122 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 GEMIN2O14893 280 aaKnown RBP2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 NUPR1O60356 82 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 MRPS14O60783 128 aaKnown RBP2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 GNGT1P63211 74 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 MPV17LQ2QL34 196 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 KRTAP13-4Q3LI77 160 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 LINC00299Q6ZSB3 139 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 ZNF625Q96I27 306 aaPredicted RBP2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 SEC11CQ9BY50 192 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 KIAA1549Q9HCM3 1950 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 CUX1P39880 1505 aa2.27□□□□□ -2.05
SRGAP3-205ENST00000475560 CCDC141Q6ZP82 1450 aa2.26□□□□□ -2.05
SRGAP3-205ENST00000475560 PREX1Q8TCU6 1659 aa2.26□□□□□ -2.05
SRGAP3-205ENST00000475560 LIMD2Q9BT23 127 aa2.26□□□□□ -2.05
SRGAP3-205ENST00000475560 SERP1Q9Y6X1 66 aa2.26□□□□□ -2.05
SRGAP3-205ENST00000475560 MAP3K1Q13233 1512 aa2.26□□□□□ -2.05
SRGAP3-205ENST00000475560 NRXN1Q9ULB1 1477 aa2.26□□□□□ -2.05
SRGAP3-205ENST00000475560 HFM1A2PYH4 1435 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 CDC42BPAQ5VT25 1732 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 ITSN2Q9NZM3 1697 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 ADGRB2O60241 1585 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 TTC37Q6PGP7 1564 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 TRAV17A0A0B4J275 112 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 HCRTO43612 131 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 PPYP01298 95 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 S100A8P05109 93 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 IL5P05113 134 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 RBP2P50120 134 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 POLR2JP52435 117 aaKnown RBP2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 PPP3R1P63098 170 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 OR2T2Q6IF00 324 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 ZCCHC13Q8WW36 166 aaKnown RBP2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 MED9Q9NWA0 146 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 SIP14410 1827 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 WNK3Q9BYP7 1800 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 HEATR5BQ9P2D3 2071 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 PZPP20742 1482 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 PCNTO95613 3336 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 ANKRD50Q9ULJ7 1429 aa2.25□□□□□ -2.05
SRGAP3-205ENST00000475560 TMEM131LA2VDJ0 1609 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 GBF1Q92538 1859 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 ALKQ9UM73 1620 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 CACNA1BQ00975 2339 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 PLXNC1O60486 1568 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 CDK13Q14004 1512 aaKnown RBP2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 TRANK1O15050 2925 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 INE1O15225 51 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 IL7P13232 177 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 TPPP2P59282 170 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 RHOHQ15669 191 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 SPRNQ5BIV9 151 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 Q6AWC8 147 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 PPDPFLQ8WWR9 84 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 LSM10Q969L4 123 aaKnown RBP2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 SPTSSAQ969W0 71 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 TMEM242Q9NWH2 141 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 COA4Q9NYJ1 87 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 MAST4O15021 2626 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 TEX14Q8IWB6 1497 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 CROCC2H7BZ55 1655 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 PIEZO1Q92508 2521 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 ZNF462Q96JM2 2506 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 VPS8Q8N3P4 1428 aa2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 MDC1Q14676 2089 aaKnown RBP2.24□□□□□ -2.05
SRGAP3-205ENST00000475560 UGGT2Q9NYU1 1516 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 AKAP11Q9UKA4 1901 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 TRPM7Q96QT4 1865 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 A0A0J9YY99 117 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 TMEM30CPA0ZSE6 113 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 JMJD7-PLA2G4BH0Y9G9 81 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 DNAL4O96015 105 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 TNFP01375 233 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 IGKCP01834 107 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 PIRTP0C851 137 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 PRB4P10163 310 aaPredicted RBP2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 SPANXN1Q5VSR9 72 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 CSAG1Q6PB30 78 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 UNQ5815/PRO19632Q6UWF5 114 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 PLPP5Q8NEB5 264 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 PPP3R2Q96LZ3 170 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 NDUFA12Q9UI09 145 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 PSME4Q14997 1843 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 NWD1Q149M9 1564 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 CFAP74Q9C0B2 1584 aa2.23□□□□□ -2.05
SRGAP3-205ENST00000475560 EPRSP07814 1512 aaKnown RBP2.22□□□□□ -2.05
SRGAP3-205ENST00000475560 SCN3AQ9NY46 2000 aa2.22□□□□□ -2.05
SRGAP3-205ENST00000475560 CCDC18Q5T9S5 1454 aa2.22□□□□□ -2.05
SRGAP3-205ENST00000475560 MCRIP1C9JLW8 97 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms