RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 TMEM91Q6ZNR0 172 aa0.22□□□□□ -2.37
LTN1-204ENST00000475344 CALML5Q9NZT1 146 aa0.22□□□□□ -2.37
LTN1-204ENST00000475344 DNAJC15Q9Y5T4 150 aa0.22□□□□□ -2.37
LTN1-204ENST00000475344 CELSR1Q9NYQ6 3014 aa0.22□□□□□ -2.37
LTN1-204ENST00000475344 KDM5CP41229 1560 aa0.22□□□□□ -2.37
LTN1-204ENST00000475344 CELSR2Q9HCU4 2923 aa0.22□□□□□ -2.37
LTN1-204ENST00000475344 CHD9Q3L8U1 2897 aa0.22□□□□□ -2.37
LTN1-204ENST00000475344 VIRMAQ69YN4 1812 aaKnown RBP0.22□□□□□ -2.37
LTN1-204ENST00000475344 TRAV17A0A0B4J275 112 aa0.21□□□□□ -2.38
LTN1-204ENST00000475344 A0A1B0GX51 115 aa0.21□□□□□ -2.38
LTN1-204ENST00000475344 C9JAW5 83 aa0.21□□□□□ -2.38
LTN1-204ENST00000475344 POLR2JP52435 117 aaKnown RBP0.21□□□□□ -2.38
LTN1-204ENST00000475344 TAC4Q86UU9 113 aa0.21□□□□□ -2.38
LTN1-204ENST00000475344 HIGD1AQ9Y241 93 aa0.21□□□□□ -2.38
LTN1-204ENST00000475344 LRP1Q07954 4544 aaKnown RBP0.21□□□□□ -2.38
LTN1-204ENST00000475344 CDK12Q9NYV4 1490 aaPredicted RBP0.21□□□□□ -2.38
LTN1-204ENST00000475344 AHCTF1Q8WYP5 2266 aa0.2□□□□□ -2.38
LTN1-204ENST00000475344 ASXL3Q9C0F0 2248 aa0.2□□□□□ -2.38
LTN1-204ENST00000475344 PNMA8CA0A1B0GUJ8 204 aa0.2□□□□□ -2.38
LTN1-204ENST00000475344 SCTP09683 121 aa0.2□□□□□ -2.38
LTN1-204ENST00000475344 CMPK1P30085 196 aa0.2□□□□□ -2.38
LTN1-204ENST00000475344 SPINK6Q6UWN8 80 aa0.2□□□□□ -2.38
LTN1-204ENST00000475344 SLC25A26Q70HW3 274 aa0.2□□□□□ -2.38
LTN1-204ENST00000475344 BANF2Q9H503 90 aa0.2□□□□□ -2.38
LTN1-204ENST00000475344 TMEM14BQ9NUH8 114 aa0.2□□□□□ -2.38
LTN1-204ENST00000475344 ARAP1Q96P48 1450 aa0.2□□□□□ -2.38
LTN1-204ENST00000475344 UBR5O95071 2799 aaPredicted RBP0.2□□□□□ -2.38
LTN1-204ENST00000475344 PLXNA1Q9UIW2 1896 aa0.2□□□□□ -2.38
LTN1-204ENST00000475344 A0A096LNT2 108 aa0.19□□□□□ -2.38
LTN1-204ENST00000475344 TRBV10-1A0A0K0K1A3 114 aa0.19□□□□□ -2.38
LTN1-204ENST00000475344 CXorf51AA0A1B0GTR3 108 aa0.19□□□□□ -2.38
LTN1-204ENST00000475344 HLA-DRB4P13762 266 aa0.19□□□□□ -2.38
LTN1-204ENST00000475344 PLGLB1Q02325 96 aa0.19□□□□□ -2.38
LTN1-204ENST00000475344 KLKP1Q107X0 134 aa0.19□□□□□ -2.38
LTN1-204ENST00000475344 TCTE3Q8IZS6 198 aa0.19□□□□□ -2.38
LTN1-204ENST00000475344 SLC35B3Q9H1N7 401 aa0.19□□□□□ -2.38
LTN1-204ENST00000475344 HLA-DRB4X5D2U9 266 aa0.19□□□□□ -2.38
LTN1-204ENST00000475344 AKAP11Q9UKA4 1901 aa0.19□□□□□ -2.38
LTN1-204ENST00000475344 SMIM24O75264 130 aa0.18□□□□□ -2.38
LTN1-204ENST00000475344 AKR1D1P51857 326 aa0.18□□□□□ -2.38
LTN1-204ENST00000475344 BLMP54132 1417 aaPredicted RBP0.18□□□□□ -2.38
LTN1-204ENST00000475344 CACNA1CQ13936 2221 aa0.18□□□□□ -2.38
LTN1-204ENST00000475344 NCOR2Q9Y618 2525 aa0.18□□□□□ -2.38
LTN1-204ENST00000475344 UNC79Q9P2D8 2635 aa0.17□□□□□ -2.38
LTN1-204ENST00000475344 HRNRQ86YZ3 2850 aaPredicted RBP0.17□□□□□ -2.38
LTN1-204ENST00000475344 OR2H2O95918 312 aa0.17□□□□□ -2.38
LTN1-204ENST00000475344 MPC1LP0DKB6 136 aa0.17□□□□□ -2.38
LTN1-204ENST00000475344 SNX29P2Q8IUI4 249 aa0.17□□□□□ -2.38
LTN1-204ENST00000475344 PPDPFLQ8WWR9 84 aa0.17□□□□□ -2.38
LTN1-204ENST00000475344 DMBT1Q9UGM3 2413 aaPredicted RBP0.16□□□□□ -2.38
LTN1-204ENST00000475344 SYNJ1O43426 1573 aa0.16□□□□□ -2.38
LTN1-204ENST00000475344 CCDC153Q494R4 210 aa0.16□□□□□ -2.38
LTN1-204ENST00000475344 CLLU1Q5K131 121 aa0.16□□□□□ -2.38
LTN1-204ENST00000475344 TAS2R8Q9NYW2 309 aa0.16□□□□□ -2.38
LTN1-204ENST00000475344 TEX49A0A1B0GTD5 131 aa0.15□□□□□ -2.39
LTN1-204ENST00000475344 PYYP10082 97 aa0.15□□□□□ -2.39
LTN1-204ENST00000475344 SLC25A6P12236 298 aa0.15□□□□□ -2.39
LTN1-204ENST00000475344 ELOF1P60002 83 aaKnown RBP0.15□□□□□ -2.39
LTN1-204ENST00000475344 DR1Q01658 176 aa0.15□□□□□ -2.39
LTN1-204ENST00000475344 TMEM141Q96I45 108 aa0.15□□□□□ -2.39
LTN1-204ENST00000475344 LSM2Q9Y333 95 aaKnown RBP0.15□□□□□ -2.39
LTN1-204ENST00000475344 NOP16Q9Y3C1 178 aaKnown RBP0.15□□□□□ -2.39
LTN1-204ENST00000475344 ANKRD30AQ9BXX3 1397 aa0.15□□□□□ -2.39
LTN1-204ENST00000475344 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
LTN1-204ENST00000475344 TNS1Q9HBL0 1735 aaKnown RBP0.15□□□□□ -2.39
LTN1-204ENST00000475344 BORCS7-ASMTA0A0B4J1R7 106 aa0.14□□□□□ -2.39
LTN1-204ENST00000475344 EMX2Q04743 252 aa0.14□□□□□ -2.39
LTN1-204ENST00000475344 OR2T2Q6IF00 324 aa0.14□□□□□ -2.39
LTN1-204ENST00000475344 AKAP14Q86UN6 197 aa0.14□□□□□ -2.39
LTN1-204ENST00000475344 ATP6V0E2Q8NHE4 81 aa0.14□□□□□ -2.39
LTN1-204ENST00000475344 DYNLRB2Q8TF09 96 aa0.14□□□□□ -2.39
LTN1-204ENST00000475344 PARP14Q460N5 1801 aa0.14□□□□□ -2.39
LTN1-204ENST00000475344 PHIPQ8WWQ0 1821 aa0.14□□□□□ -2.39
LTN1-204ENST00000475344 ZNF142P52746 1687 aaPredicted RBP0.14□□□□□ -2.39
LTN1-204ENST00000475344 CCDC171Q6TFL3 1326 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 ARFGEF1Q9Y6D6 1849 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 TRAV2A0A0B4J234 112 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 APOC1P02654 83 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 RBP4P02753 201 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 DBIP07108 87 aaKnown RBP0.13□□□□□ -2.39
LTN1-204ENST00000475344 MORN2Q502X0 79 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 ATP11AUNQ6ZP68 121 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 MAGOHBQ96A72 148 aaKnown RBP0.13□□□□□ -2.39
LTN1-204ENST00000475344 IFI27L1Q96BM0 104 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 DSCR8Q96T75 97 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 PROK2Q9HC23 129 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 SPANXA1Q9NS26 97 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 SPANXCQ9NY87 97 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 ZNF292O60281 2723 aa0.13□□□□□ -2.39
LTN1-204ENST00000475344 SSPOA2VEC9 5147 aa0.12□□□□□ -2.39
LTN1-204ENST00000475344 MUC22E2RYF6 1773 aaPredicted RBP0.12□□□□□ -2.39
LTN1-204ENST00000475344 UHRF1BP1LA0JNW5 1464 aa0.12□□□□□ -2.39
LTN1-204ENST00000475344 PTPRMP28827 1452 aa0.12□□□□□ -2.39
LTN1-204ENST00000475344 ZNF670-ZNF695F2Z2N8 137 aa0.12□□□□□ -2.39
LTN1-204ENST00000475344 SCGB1A1P11684 91 aa0.12□□□□□ -2.39
LTN1-204ENST00000475344 HIST1H1AQ02539 215 aaPredicted RBP0.12□□□□□ -2.39
LTN1-204ENST00000475344 VMO1Q7Z5L0 202 aa0.12□□□□□ -2.39
LTN1-204ENST00000475344 AIF1LQ9BQI0 150 aa0.12□□□□□ -2.39
LTN1-204ENST00000475344 VPS25Q9BRG1 176 aa0.12□□□□□ -2.39
LTN1-204ENST00000475344 COA4Q9NYJ1 87 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms