RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ANAPC16Q96DE5 110 aa7.16□□□□□ -1.26
COL8A1-206ENST00000474648 C16orf74Q96GX8 76 aa7.16□□□□□ -1.26
COL8A1-206ENST00000474648 STAB2Q8WWQ8 2551 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 SMIM27A0A1W2PRY6 76 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 A8MWL6 223 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 PPP1R2P9O14990 202 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 SNAI2O43623 268 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 SPINK4O60575 86 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 MT-ND4LP03901 98 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 MED14OSP0DP75 135 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 EMP1P54849 157 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 ATRAIDQ6UW56 229 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 SVBPQ8N300 66 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 TSKUQ8WUA8 353 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 NOP10Q9NPE3 64 aaKnown RBP7.15□□□□□ -1.26
COL8A1-206ENST00000474648 IL36BQ9NZH7 164 aa7.15□□□□□ -1.26
COL8A1-206ENST00000474648 A0A0J9YWU9 116 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 XKRY2A2RUG3 117 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 FAM231BA6NCW3 169 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 H3BVH4 76 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 OR5AL1P0C617 328 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 S100A4P26447 101 aaKnown RBP7.14□□□□□ -1.27
COL8A1-206ENST00000474648 ZNF415Q09FC8 603 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 LYZL1Q6UWQ5 148 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 FER1L6-AS1Q8NA97 138 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 PTH2Q96A98 100 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 SPXQ9BT56 116 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 CTDSP1Q9GZU7 261 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 GFRA4Q9GZZ7 299 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 C11orf68Q9H3H3 251 aaKnown RBP7.14□□□□□ -1.27
COL8A1-206ENST00000474648 DKK2Q9UBU2 259 aa7.14□□□□□ -1.27
COL8A1-206ENST00000474648 TIMM8BQ9Y5J9 83 aaPredicted RBP7.14□□□□□ -1.27
COL8A1-206ENST00000474648 IGHV4-4A0A075B6R2 117 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 A0A087WWC5 75 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 MUC21A0A0G2JKD1 596 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 MUC21A0A140T8X8 626 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 A0A1W2PPQ1 181 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 SNURFLB1AK76 121 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 M0R2P5 195 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 EIF4EBP3O60516 100 aaPredicted RBP7.13□□□□□ -1.27
COL8A1-206ENST00000474648 SNAPINO95295 136 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 RHEBQ15382 184 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 FAM222AQ5U5X8 452 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 WDR73Q6P4I2 378 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 LINC00612Q8N6U2 182 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 NUP35Q8NFH5 326 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 OR10AG1Q8NH19 301 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 RASL10AQ92737 203 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 RPS10P5Q9NQ39 176 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 TMEM242Q9NWH2 141 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 CELA1Q9UNI1 258 aa7.13□□□□□ -1.27
COL8A1-206ENST00000474648 LYRM9A8MSI8 78 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 HIGD1CA8MV81 97 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 F2Z2F3 143 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 ATP6V1G1O75348 118 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 NXPH4O95158 308 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 CTRLP40313 264 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 LGALS9BQ3B8N2 356 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 CDPF1Q6NVV7 123 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 Q6ZTI0 123 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 PGLYRP4Q96LB8 373 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 TPPP3Q9BW30 176 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 CNFNQ9BYD5 112 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 EDA2RQ9HAV5 297 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 MRPL16Q9NX20 251 aaKnown RBP7.12□□□□□ -1.27
COL8A1-206ENST00000474648 U3KQK5 164 aa7.12□□□□□ -1.27
COL8A1-206ENST00000474648 TGP01266 2768 aa7.11□□□□□ -1.27
COL8A1-206ENST00000474648 TRGV1A0A0A0MS02 117 aa7.11□□□□□ -1.27
COL8A1-206ENST00000474648 SPART-AS1P0CW21 52 aa7.11□□□□□ -1.27
COL8A1-206ENST00000474648 FAM3BP58499 235 aaPredicted RBP7.11□□□□□ -1.27
COL8A1-206ENST00000474648 C12orf74Q32Q52 190 aa7.11□□□□□ -1.27
COL8A1-206ENST00000474648 ZNF876PQ49A33 203 aa7.11□□□□□ -1.27
COL8A1-206ENST00000474648 PIK3CD-AS1Q5SR53 167 aa7.11□□□□□ -1.27
COL8A1-206ENST00000474648 POM121L12Q8N7R1 296 aa7.11□□□□□ -1.27
COL8A1-206ENST00000474648 IMMP2LQ96T52 175 aa7.11□□□□□ -1.27
COL8A1-206ENST00000474648 MSRB1Q9NZV6 116 aa7.11□□□□□ -1.27
COL8A1-206ENST00000474648 NAT8BQ9UHF3 227 aa7.11□□□□□ -1.27
COL8A1-206ENST00000474648 PHLDA3Q9Y5J5 127 aa7.11□□□□□ -1.27
COL8A1-206ENST00000474648 DNAH7Q8WXX0 4024 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 GAGE12BA1L429 117 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 CXorf65A6NEN9 183 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 GAGE7O76087 117 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 GAGE12FP0CL80 117 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 GAGE12GP0CL81 117 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 GAGE12IP0CL82 117 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 DEFB130BP0DP73 79 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 DEFB130AP0DP74 79 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 NTF3P20783 257 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 SSTP61278 116 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 CACNG7P62955 275 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 C18orf15Q96N68 181 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 JPT2Q9H910 190 aa7.1□□□□□ -1.27
COL8A1-206ENST00000474648 MUC4Q99102 2169 aa7.09□□□□□ -1.27
COL8A1-206ENST00000474648 M0R381 172 aa7.09□□□□□ -1.27
COL8A1-206ENST00000474648 RS1O15537 224 aa7.09□□□□□ -1.27
COL8A1-206ENST00000474648 S100A1P23297 94 aa7.09□□□□□ -1.27
COL8A1-206ENST00000474648 SPANXN1Q5VSR9 72 aa7.09□□□□□ -1.27
COL8A1-206ENST00000474648 ZFP82Q8N141 532 aa7.09□□□□□ -1.27
COL8A1-206ENST00000474648 SYT8Q8NBV8 401 aa7.09□□□□□ -1.27
COL8A1-206ENST00000474648 NDUFAF3Q9BU61 184 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms