RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 PCSK5Q92824 1860 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 TRBV19A0A075B6N1 114 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 A0A0A0MQY5 61 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 IGKV2D-26A0A0A0MRZ7 120 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 WI2-2373I1.2A0A1W2PRP0 233 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 CGB1A6NKQ9 187 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 C10orf142B7Z368 130 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 NDUFC1O43677 76 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 COX6CP09669 75 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 VPREB1P12018 145 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 ERVK-16P61578 105 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 KRTAP27-1Q3LI81 207 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 PAPPA-AS1Q5QFB9 102 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 CRYBG3Q68DQ2 2970 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 FMC1Q96HJ9 113 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 TAC3Q9UHF0 121 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 SCN3AQ9NY46 2000 aa5.58□□□□□ -1.52
GPNMB-209ENST00000474157 SNRNP200O75643 2136 aaKnown RBP5.57□□□□□ -1.52
GPNMB-209ENST00000474157 RP1L1Q8IWN7 2480 aaPredicted RBP5.57□□□□□ -1.52
GPNMB-209ENST00000474157 DOCK11Q5JSL3 2073 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 OXTP01178 125 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 IGKV1-39P01597 117 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 IGKV1D-39P04432 117 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 PRSS1P07477 247 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 CDAP32320 146 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 IFI27P40305 119 aaPredicted RBP5.57□□□□□ -1.52
GPNMB-209ENST00000474157 GFERP55789 205 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 C2orf82Q6UX34 121 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 Q8N8P6 123 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 DAND5Q8N907 189 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 DSCR8Q96T75 97 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 C16orf95Q9H693 158 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 MED13Q9UHV7 2174 aa5.57□□□□□ -1.52
GPNMB-209ENST00000474157 SPENQ96T58 3664 aaKnown RBP5.57□□□□□ -1.52
GPNMB-209ENST00000474157 NCOA6Q14686 2063 aaPredicted RBP5.57□□□□□ -1.52
GPNMB-209ENST00000474157 EXPH5Q8NEV8 1989 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 TMSB15BA0A087X1C1 80 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 M0R135 149 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 NTN3O00634 580 aaPredicted RBP5.56□□□□□ -1.52
GPNMB-209ENST00000474157 MRPS12O15235 138 aaKnown RBP5.56□□□□□ -1.52
GPNMB-209ENST00000474157 CFC1BP0CG36 223 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 CFC1P0CG37 223 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 SYNJ2BPP57105 145 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 FAM27E3Q08E93 113 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 SSMEM1Q8WWF3 244 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 SPACA5Q96QH8 159 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 HCFC1P51610 2035 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 PDZD2O15018 2839 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 CELSR1Q9NYQ6 3014 aa5.56□□□□□ -1.52
GPNMB-209ENST00000474157 K7EMI3 77 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 M0R1B8 84 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 ADORA2A-AS1P86434 159 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 ZNF816Q0VGE8 651 aaPredicted RBP5.55□□□□□ -1.52
GPNMB-209ENST00000474157 GTF3C1Q12789 2109 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 DEFB133Q30KQ1 61 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 DEFB109BQ30KR1 87 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 ZNF542PQ5EBM4 170 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 FOXL2NBQ6ZUU3 175 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 MDP1Q86V88 176 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 VKORC1L1Q8N0U8 176 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 VSIG2Q96IQ7 327 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 PGLYRP4Q96LB8 373 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 S1PR3Q99500 378 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 DAZ1Q9NQZ3 744 aaKnown RBP5.55□□□□□ -1.52
GPNMB-209ENST00000474157 OTORQ9NRC9 128 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 RPUSD1Q9UJJ7 312 aaKnown RBP5.55□□□□□ -1.52
GPNMB-209ENST00000474157 RP1P56715 2156 aa5.55□□□□□ -1.52
GPNMB-209ENST00000474157 IGKV1D-13A0A0B4J2D9 117 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 TRGV8A0A0C4DH27 118 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 TEX49A0A1B0GTD5 131 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 PLAC8L1A1L4L8 177 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 TMEM202A6NGA9 273 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 LILRA5A6NI73 299 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 H3BTX0 84 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 SCRG1O75711 98 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 INAFM2P0DMQ5 153 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 IGKV1-13P0DP09 117 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 ZNF138P52744 262 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 FGF12P61328 243 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 MIC13Q5XKP0 118 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 LINC01561Q8N1V8 128 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 MAPKAPK5-AS1Q8N8E1 139 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 C10orf105Q8TEF2 133 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 NABP2Q9BQ15 211 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 DEPPQ9NTK1 212 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 RNF7Q9UBF6 113 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 SLC25A15Q9Y619 301 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 ARHGAP21Q5T5U3 1957 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 KIAA1549Q9HCM3 1950 aa5.54□□□□□ -1.52
GPNMB-209ENST00000474157 ANKHD1Q8IWZ3 2542 aaKnown RBP5.53□□□□□ -1.52
GPNMB-209ENST00000474157 CCDC168Q8NDH2 2452 aa5.53□□□□□ -1.52
GPNMB-209ENST00000474157 A0A1W2PQD3 144 aa5.53□□□□□ -1.52
GPNMB-209ENST00000474157 PRSS46E5RG02 174 aa5.53□□□□□ -1.52
GPNMB-209ENST00000474157 F8VRH5 84 aa5.53□□□□□ -1.52
GPNMB-209ENST00000474157 INS-IGF2F8WCM5 200 aa5.53□□□□□ -1.52
GPNMB-209ENST00000474157 IGHV3-33P01772 117 aa5.53□□□□□ -1.52
GPNMB-209ENST00000474157 MYCNOSP40205 109 aa5.53□□□□□ -1.52
GPNMB-209ENST00000474157 ERCC8Q13216 396 aa5.53□□□□□ -1.52
GPNMB-209ENST00000474157 DAZAP2Q15038 168 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms