RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 FRMD6-AS1P0C7T7 363 aa7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 IGLC6P0CF74 106 aa7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 RBMY1A1P0DJD3 496 aaKnown RBP7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 RBMY1CP0DJD4 496 aa7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 RAB5AP20339 215 aa7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 FOXA3P55318 350 aaPredicted RBP7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 RBMY1FQ15415 496 aaKnown RBP7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 DNLZQ5SXM8 178 aa7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 Q6ZWC4 215 aa7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 C1orf158Q8N1D5 194 aa7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 MUC21A0A0G2JKD1 596 aa7.48□□□□□ -1.21
PRPF38A-202ENST00000474048 MUC21A0A140T8X8 626 aa7.48□□□□□ -1.21
PRPF38A-202ENST00000474048 SNAI2O43623 268 aa7.48□□□□□ -1.21
PRPF38A-202ENST00000474048 NTF3P20783 257 aa7.48□□□□□ -1.21
PRPF38A-202ENST00000474048 OR11H2Q8NH07 326 aa7.48□□□□□ -1.21
PRPF38A-202ENST00000474048 TP53TG3Q9ULZ0 132 aa7.48□□□□□ -1.21
PRPF38A-202ENST00000474048 TRAPPC1Q9Y5R8 145 aa7.48□□□□□ -1.21
PRPF38A-202ENST00000474048 C1orf196B1AJZ1 125 aa7.47□□□□□ -1.21
PRPF38A-202ENST00000474048 M0R2P5 195 aa7.47□□□□□ -1.21
PRPF38A-202ENST00000474048 SPRY2O43597 315 aa7.47□□□□□ -1.21
PRPF38A-202ENST00000474048 ZNF876PQ49A33 203 aa7.47□□□□□ -1.21
PRPF38A-202ENST00000474048 KPRPQ5T749 579 aaPredicted RBP7.47□□□□□ -1.21
PRPF38A-202ENST00000474048 ZNF705AQ6ZN79 300 aaPredicted RBP7.47□□□□□ -1.21
PRPF38A-202ENST00000474048 OR10AG1Q8NH19 301 aa7.47□□□□□ -1.21
PRPF38A-202ENST00000474048 MRAPQ8TCY5 172 aa7.47□□□□□ -1.21
PRPF38A-202ENST00000474048 GNB1LQ9BYB4 327 aa7.47□□□□□ -1.21
PRPF38A-202ENST00000474048 GSN-AS1Q9NRJ2 163 aa7.47□□□□□ -1.21
PRPF38A-202ENST00000474048 TRGV1A0A0A0MS02 117 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 COLCA2A8K830 154 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 APCSP02743 223 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 PRB2P02812 416 aaPredicted RBP7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 MGPP08493 103 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 RNASE3P12724 160 aaKnown RBP7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 MIFP14174 115 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 EMP1P54849 157 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 FABP9Q0Z7S8 132 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 CSNK1G2-AS1Q8NCQ2 148 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 RNF183Q96D59 192 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 C9orf85Q96MD7 179 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 SSBP4Q9BWG4 385 aaPredicted RBP7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 MRPL18Q9H0U6 180 aaKnown RBP7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 MDFICQ9P1T7 246 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 TP53TG1Q9Y2A0 90 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 VWFP04275 2813 aa7.46□□□□□ -1.22
PRPF38A-202ENST00000474048 TEX48A0A1B0GUV7 120 aa7.45□□□□□ -1.22
PRPF38A-202ENST00000474048 GIG44P09565 113 aaPredicted RBP7.45□□□□□ -1.22
PRPF38A-202ENST00000474048 RAB5BP61020 215 aa7.45□□□□□ -1.22
PRPF38A-202ENST00000474048 RNASE8Q8TDE3 154 aaKnown RBP7.45□□□□□ -1.22
PRPF38A-202ENST00000474048 SPATA25Q9BR10 227 aa7.45□□□□□ -1.22
PRPF38A-202ENST00000474048 NDUFAF3Q9BU61 184 aa7.45□□□□□ -1.22
PRPF38A-202ENST00000474048 CNFNQ9BYD5 112 aa7.45□□□□□ -1.22
PRPF38A-202ENST00000474048 DPH3P1Q9H4G8 78 aa7.45□□□□□ -1.22
PRPF38A-202ENST00000474048 ZMAT4Q9H898 229 aa7.45□□□□□ -1.22
PRPF38A-202ENST00000474048 TRGV2A0A075B6R0 118 aa7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 A0A1B0GXF2 115 aa7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 A8MWV9 139 aa7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 F5H697 171 aa7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 AZU1P20160 251 aa7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 ZNF56Q15929 161 aa7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 FAM74A4Q5TZK3 123 aa7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 YPEL4Q96NS1 127 aa7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 TMEM191AQ9H0A3 160 aa7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 NOP10Q9NPE3 64 aaKnown RBP7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 SCRT2Q9NQ03 307 aa7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
PRPF38A-202ENST00000474048 IGHV4-4A0A075B6R2 117 aa7.43□□□□□ -1.22
PRPF38A-202ENST00000474048 K7EIL1 84 aa7.43□□□□□ -1.22
PRPF38A-202ENST00000474048 RHODO00212 210 aa7.43□□□□□ -1.22
PRPF38A-202ENST00000474048 LGALS9BQ3B8N2 356 aa7.43□□□□□ -1.22
PRPF38A-202ENST00000474048 PIK3CD-AS1Q5SR53 167 aa7.43□□□□□ -1.22
PRPF38A-202ENST00000474048 TMEM136Q6ZRR5 245 aa7.43□□□□□ -1.22
PRPF38A-202ENST00000474048 IGHV4-28A0A0C4DH34 117 aa7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 LYRM9A8MSI8 78 aa7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 H7C1H1 209 aa7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 NXPH4O95158 308 aa7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 TRGC2P03986 189 aa7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 PRM2P04554 102 aa7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 CKS2P33552 79 aa7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 DAZ2Q13117 558 aaKnown RBP7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 C14orf178Q8N769 122 aaPredicted RBP7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 C11orf72Q8NBR9 251 aa7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 OR4C5Q8NGB2 326 aa7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 PTH2Q96A98 100 aa7.42□□□□□ -1.22
PRPF38A-202ENST00000474048 A0A087WWL8 130 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 GAGE12BA1L429 117 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 GAGE7O76087 117 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 PPP1R17O96001 155 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 PPBPP02775 128 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 S100A6P06703 90 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 GAGE12FP0CL80 117 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 GAGE12GP0CL81 117 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 GAGE12IP0CL82 117 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 SPART-AS1P0CW21 52 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 EVI2AP22794 236 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 FAM104BQ5XKR9 115 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 AMN1Q8IY45 258 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 ORMDL3Q8N138 153 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 MSRB1Q9NZV6 116 aa7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 TMA7Q9Y2S6 64 aaKnown RBP7.41□□□□□ -1.22
PRPF38A-202ENST00000474048 X6R8D5 127 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms