RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 C2orf91Q6ZV80 131 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 TMED4Q7Z7H5 227 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 GPHB5Q86YW7 130 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 SLC35F6Q8N357 371 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 TCTEX1D1Q8N7M0 179 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 OR51A2Q8NGJ7 313 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 OR10D4PQ8NGN7 298 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 DNAJC9Q8WXX5 260 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 AP3S1Q92572 193 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 GINS4Q9BRT9 223 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 C9orf16Q9BUW7 83 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 WDR61Q9GZS3 305 aaKnown RBP1.26□□□□□ -2.21
CALD1-216ENST00000473714 TLNRD1Q9H1K6 362 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 C11orf1Q9H5F2 150 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 RSL24D1Q9UHA3 163 aaKnown RBP1.26□□□□□ -2.21
CALD1-216ENST00000473714 FUT9Q9Y231 359 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 V9GYQ6 96 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 TRAV9-1A0A075B6T8 112 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 TRAV36DV7A0A075B6V5 113 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 TRAPPC13A5PLN9 417 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 C19orf71A6NCJ1 209 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 OR7C1O76099 320 aaPredicted RBP1.25□□□□□ -2.21
CALD1-216ENST00000473714 TTRP02766 147 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 CRYGAP11844 174 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 CBLN1P23435 193 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 HIST1H2BOP23527 126 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 S100A4P26447 101 aaKnown RBP1.25□□□□□ -2.21
CALD1-216ENST00000473714 ERP29P30040 261 aaKnown RBP1.25□□□□□ -2.21
CALD1-216ENST00000473714 HIST1H2BBP33778 126 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 XCL1P47992 114 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 EMP1P54849 157 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 EDDM3BP56851 147 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 HIST1H2BDP58876 126 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 TMEM258P61165 79 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 VBP1P61758 197 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 CNBPP62633 177 aaKnown RBP1.25□□□□□ -2.21
CALD1-216ENST00000473714 HIST1H4AP62805 103 aaKnown RBP1.25□□□□□ -2.21
CALD1-216ENST00000473714 HIST1H2BCP62807 126 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 ERHP84090 104 aaKnown RBP1.25□□□□□ -2.21
CALD1-216ENST00000473714 MEF2BQ02080 365 aaPredicted RBP1.25□□□□□ -2.21
CALD1-216ENST00000473714 HIST2H2BEQ16778 126 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 FAM229BQ4G0N7 80 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.25□□□□□ -2.21
CALD1-216ENST00000473714 RPS27LQ71UM5 84 aaKnown RBP1.25□□□□□ -2.21
CALD1-216ENST00000473714 LHFPL1Q86WI0 220 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 C4orf33Q8N1A6 199 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 C1orf158Q8N1D5 194 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 Q8N814 137 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 LINC00304Q8N9R0 145 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 PXT1Q8NFP0 134 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 OR4C16Q8NGL9 310 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 OR5J2Q8NH18 312 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 MRPL30Q8TCC3 161 aaKnown RBP1.25□□□□□ -2.21
CALD1-216ENST00000473714 GNPDA2Q8TDQ7 276 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 HIST1H2BHQ93079 126 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 HIST1H2BNQ99877 126 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 HIST1H2BMQ99879 126 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 KRTAP4-1Q9BYQ7 146 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 TTTY13Q9BZ97 58 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 C6orf62Q9GZU0 229 aaPredicted RBP1.25□□□□□ -2.21
CALD1-216ENST00000473714 EFCAB1Q9HAE3 211 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 NAT8Q9UHE5 227 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 TMEM56-RWDD3S4R434 201 aa1.25□□□□□ -2.21
CALD1-216ENST00000473714 A0A087WUU8 490 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 TRAV26-2A0A0B4J265 109 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 FAM236DA0A1B0GTK5 79 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 EXOC1LA0A1B0GW35 172 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 A0A1W2PNN7 141 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 hADV38S2A0JD32 116 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 IRGMA1A4Y4 181 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 C11orf86A6NJI1 115 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 A8MT66 165 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 A8MUN3 132 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 ZNF736B4DX44 427 aaPredicted RBP1.24□□□□□ -2.21
CALD1-216ENST00000473714 H3BT86 120 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 SLC22A1O15245 554 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 RER1O15258 196 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 HMGB3O15347 200 aaKnown RBP1.24□□□□□ -2.21
CALD1-216ENST00000473714 BANF1O75531 89 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 OR5F1O95221 314 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 IGHV3-7P01780 117 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 CD5P06127 495 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 RBP1P09455 135 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 SPART-AS1P0CW21 52 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 SMIM17P0DL12 118 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 FAM236CP0DP71 79 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 G0S2P27469 103 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 SERPINB9P50453 376 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 GZMMP51124 257 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 COPZ1P61923 177 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 RHOBP62745 196 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 MIAQ16674 131 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 KRTAP19-2Q3LHN2 52 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 TRIQKQ629K1 86 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 RPL22L1Q6P5R6 122 aaKnown RBP1.24□□□□□ -2.21
CALD1-216ENST00000473714 LINC00471Q8N535 108 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 GDPD1Q8N9F7 314 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 OR8B12Q8NGG6 310 aa1.24□□□□□ -2.21
CALD1-216ENST00000473714 OR10X1Q8NGY0 326 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms