RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 TMEM244Q5VVB8 128 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 CTAGE3PQ8IX95 158 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 C8orf59Q8N0T1 100 aaPredicted RBP0.65□□□□□ -2.31
GINS1-202ENST00000473460 OR5AS1Q8N127 324 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 C4orf33Q8N1A6 199 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 MMGT1Q8N4V1 131 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.65□□□□□ -2.31
GINS1-202ENST00000473460 OR4S1Q8NGB4 309 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 OR5A2Q8NGI9 324 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 OR5H6Q8NGV6 325 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 OR10AC1Q8NH08 325 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 BRK1Q8WUW1 75 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 HYLS1Q96M11 299 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 MCEEQ96PE7 176 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 SNRNP25Q9BV90 132 aaKnown RBP0.65□□□□□ -2.31
GINS1-202ENST00000473460 TMEM191AQ9H0A3 160 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 TCEAL2Q9H3H9 227 aaPredicted RBP0.65□□□□□ -2.31
GINS1-202ENST00000473460 BANF2Q9H503 90 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 MPC1Q9Y5U8 109 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 ANKRD36BQ8N2N9 1353 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 CITO14578 2027 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 HEATR5AQ86XA9 2040 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 FANCAO15360 1455 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 POLA1P09884 1462 aaPredicted RBP0.65□□□□□ -2.31
GINS1-202ENST00000473460 PTPRMP28827 1452 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 SHANK2Q9UPX8 1470 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 CFAP74Q9C0B2 1584 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 ZNF142P52746 1687 aaPredicted RBP0.65□□□□□ -2.31
GINS1-202ENST00000473460 MGAMO43451 1857 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 ZFC3H1O60293 1989 aaKnown RBP0.65□□□□□ -2.31
GINS1-202ENST00000473460 TANC2Q9HCD6 1990 aa0.65□□□□□ -2.31
GINS1-202ENST00000473460 FREM1Q5H8C1 2179 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 POLEQ07864 2286 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 TOP2BQ02880 1626 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 PREX2Q70Z35 1606 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 MAP2P11137 1827 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 ARFGEF1Q9Y6D6 1849 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 DIDO1Q9BTC0 2240 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 TRAV13-1A0A0B4J241 112 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 TRBV27A0A0K0K1C4 114 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 TMEM218A2RU14 115 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 NCR3O14931 201 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 RER1O15258 196 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 PITX3O75364 302 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 MPC2O95563 127 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 TNFP01375 233 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 TCRAP04437 139 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 FABP2P12104 132 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 HIST1H1DP16402 221 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 GUCA1AP43080 201 aaPredicted RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 ARPP19P56211 112 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 SNRPD3P62318 126 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 HSD52Q0P140 79 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 CIRBPQ14011 172 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 HSD17B12Q53GQ0 312 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 PATE2Q6UY27 113 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 FOXI2Q6ZQN5 318 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 PHF5AQ7RTV0 110 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 LINC00305Q7Z4B0 112 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 ARPINQ7Z6K5 226 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 TEX29Q8N6K0 151 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 TCTEX1D1Q8N7M0 179 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 C5orf17Q8NAS9 161 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 MORN4Q8NDC4 146 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 POP5Q969H6 163 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 MAGOHBQ96A72 148 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 RAB37Q96AX2 223 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 AP1S3Q96PC3 154 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 OR4C12Q96R67 309 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 RPRMQ9NS64 109 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 METTL1Q9UBP6 276 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 ERVK-7P63135 1459 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 PLEKHH2Q8IVE3 1493 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 TEX14Q8IWB6 1497 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 SCN7AQ01118 1682 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 CFAP43Q8NDM7 1665 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 ITSN2Q9NZM3 1697 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 RGPD8O14715 1765 aaPredicted RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 RGPD5Q99666 1765 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 SCN11AQ9UI33 1791 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 ALPK2Q86TB3 2170 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 BAZ2BQ9UIF8 2168 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 AHNAK2Q8IVF2 5795 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 AFDNP55196 1824 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 RGPD1P0DJD0 1748 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 PARP4Q9UKK3 1724 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 LRP5O75197 1615 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 EPRSP07814 1512 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 CDK13Q14004 1512 aaKnown RBP0.64□□□□□ -2.31
GINS1-202ENST00000473460 MAGI3Q5TCQ9 1506 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 NSD3Q9BZ95 1437 aa0.64□□□□□ -2.31
GINS1-202ENST00000473460 TENM3Q9P273 2699 aa0.63□□□□□ -2.31
GINS1-202ENST00000473460 PLXNA1Q9UIW2 1896 aa0.63□□□□□ -2.31
GINS1-202ENST00000473460 PLCH1Q4KWH8 1693 aa0.63□□□□□ -2.31
GINS1-202ENST00000473460 TIAM1Q13009 1591 aa0.63□□□□□ -2.31
GINS1-202ENST00000473460 KTN1Q86UP2 1357 aaKnown RBP0.63□□□□□ -2.31
GINS1-202ENST00000473460 A0A0G2JMM0 328 aa0.63□□□□□ -2.31
GINS1-202ENST00000473460 A0A1W2PPB8 328 aa0.63□□□□□ -2.31
GINS1-202ENST00000473460 A0A1W2PPM0 123 aa0.63□□□□□ -2.31
GINS1-202ENST00000473460 hDV103S1A0JD37 113 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms