RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 UPK3BQ9BT76 320 aa7.97□□□□□ -1.13
CPNE1-222ENST00000473373 ZFP30Q9Y2G7 519 aa7.97□□□□□ -1.13
CPNE1-222ENST00000473373 K7EQD1 137 aa7.96□□□□□ -1.14
CPNE1-222ENST00000473373 FAM162BQ5T6X4 162 aa7.96□□□□□ -1.14
CPNE1-222ENST00000473373 SYT8Q8NBV8 401 aa7.96□□□□□ -1.14
CPNE1-222ENST00000473373 C11orf21Q9P2W6 132 aa7.96□□□□□ -1.14
CPNE1-222ENST00000473373 TRAV9-2A0A087WT02 112 aa7.95□□□□□ -1.14
CPNE1-222ENST00000473373 TMSB15BA0A087X1C1 80 aa7.95□□□□□ -1.14
CPNE1-222ENST00000473373 H3BVH4 76 aa7.95□□□□□ -1.14
CPNE1-222ENST00000473373 SH2D1AO60880 128 aa7.95□□□□□ -1.14
CPNE1-222ENST00000473373 RHOHQ15669 191 aa7.95□□□□□ -1.14
CPNE1-222ENST00000473373 ZNF506Q5JVG8 444 aa7.95□□□□□ -1.14
CPNE1-222ENST00000473373 SH2D6Q7Z4S9 175 aa7.95□□□□□ -1.14
CPNE1-222ENST00000473373 ZC2HC1AQ96GY0 325 aa7.95□□□□□ -1.14
CPNE1-222ENST00000473373 PHLDA3Q9Y5J5 127 aa7.95□□□□□ -1.14
CPNE1-222ENST00000473373 A0A1B0GVY2 172 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 SCO2A0A1W2PP80 73 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 A0A1W2PPQ1 181 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 GRIFINA4D1Z8 144 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 PGPEP1LA6NFU8 196 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 CIDEAO60543 219 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 S100A9P06702 114 aaKnown RBP7.94□□□□□ -1.14
CPNE1-222ENST00000473373 MED14OSP0DP75 135 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 LYPD5Q6UWN5 251 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 AKAP14Q86UN6 197 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 MBD3L1Q8WWY6 194 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 C9orf85Q96MD7 179 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 MANBALQ9NQG1 85 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 GNG13Q9P2W3 67 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 LY96Q9Y6Y9 160 aa7.94□□□□□ -1.14
CPNE1-222ENST00000473373 IGKV3D-20A0A0C4DH25 116 aa7.93□□□□□ -1.14
CPNE1-222ENST00000473373 LOC100131303A0A0U1RQF7 123 aa7.93□□□□□ -1.14
CPNE1-222ENST00000473373 A8MWV9 139 aa7.93□□□□□ -1.14
CPNE1-222ENST00000473373 RS1O15537 224 aa7.93□□□□□ -1.14
CPNE1-222ENST00000473373 IFNA1P01562 189 aa7.93□□□□□ -1.14
CPNE1-222ENST00000473373 RNASE3P12724 160 aaKnown RBP7.93□□□□□ -1.14
CPNE1-222ENST00000473373 GATA1P15976 413 aaPredicted RBP7.93□□□□□ -1.14
CPNE1-222ENST00000473373 EVI2AP22794 236 aa7.93□□□□□ -1.14
CPNE1-222ENST00000473373 RAB5CP51148 216 aa7.93□□□□□ -1.14
CPNE1-222ENST00000473373 TNP2Q05952 138 aa7.93□□□□□ -1.14
CPNE1-222ENST00000473373 FAM74A4Q5TZK3 123 aa7.93□□□□□ -1.14
CPNE1-222ENST00000473373 CFAP126Q5VTH2 177 aa7.93□□□□□ -1.14
CPNE1-222ENST00000473373 PRR27Q6MZM9 219 aa7.93□□□□□ -1.14
CPNE1-222ENST00000473373 DNAH17Q9UFH2 4485 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 TRAV8-6A0A0B4J262 113 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 M0R381 172 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 EREGO14944 169 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 LTAP01374 205 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 MGST1P10620 155 aaKnown RBP7.92□□□□□ -1.14
CPNE1-222ENST00000473373 OR10J3Q5JRS4 329 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 BAGE2Q86Y30 109 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 TCTE3Q8IZS6 198 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 SLC25A29Q8N8R3 303 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 IL36BQ9NZH7 164 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 DNAH6Q9C0G6 4158 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 FAT2Q9NYQ8 4349 aa7.92□□□□□ -1.14
CPNE1-222ENST00000473373 DNAH2Q9P225 4427 aa7.91□□□□□ -1.14
CPNE1-222ENST00000473373 C16orf90A8MZG2 172 aa7.91□□□□□ -1.14
CPNE1-222ENST00000473373 KRBOX1C9JBD0 128 aa7.91□□□□□ -1.14
CPNE1-222ENST00000473373 C1QBP02746 253 aa7.91□□□□□ -1.14
CPNE1-222ENST00000473373 ARMS2P0C7Q2 107 aa7.91□□□□□ -1.14
CPNE1-222ENST00000473373 LINC00315P59091 139 aa7.91□□□□□ -1.14
CPNE1-222ENST00000473373 DYNC1H1Q14204 4646 aaKnown RBP7.91□□□□□ -1.14
CPNE1-222ENST00000473373 TRBV6-1A0A0K0K1D8 114 aa7.9□□□□□ -1.14
CPNE1-222ENST00000473373 TRBV6-4A0A1B0GX49 114 aa7.9□□□□□ -1.14
CPNE1-222ENST00000473373 LCE2BO14633 110 aa7.9□□□□□ -1.14
CPNE1-222ENST00000473373 ZNF674Q2M3X9 581 aa7.9□□□□□ -1.14
CPNE1-222ENST00000473373 SLC51BQ86UW2 128 aa7.9□□□□□ -1.14
CPNE1-222ENST00000473373 WFDC10BQ8IUB3 73 aa7.9□□□□□ -1.14
CPNE1-222ENST00000473373 ZFP82Q8N141 532 aa7.9□□□□□ -1.14
CPNE1-222ENST00000473373 ATP6V0E2Q8NHE4 81 aa7.9□□□□□ -1.14
CPNE1-222ENST00000473373 DAZAP1Q96EP5 407 aaKnown RBP7.9□□□□□ -1.14
CPNE1-222ENST00000473373 KRTAP1-5Q9BYS1 174 aa7.9□□□□□ -1.14
CPNE1-222ENST00000473373 PARLQ9H300 379 aa7.9□□□□□ -1.14
CPNE1-222ENST00000473373 GAGE12JA6NER3 117 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 RHODO00212 210 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 CRYGDP07320 174 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 SULT1A2P50226 295 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 CRIP1P50238 77 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 SSTP61278 116 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 GAGE1Q13065 139 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 GAGE4Q13068 117 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 GAGE5Q13069 117 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 GAGE13Q4V321 117 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 NFE4Q86UQ8 179 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 ZNF575Q86XF7 245 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 C10orf126Q8N4M7 172 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 PTH2Q96A98 100 aa7.89□□□□□ -1.15
CPNE1-222ENST00000473373 A0A087WWL8 130 aa7.88□□□□□ -1.15
CPNE1-222ENST00000473373 PSCAO43653 123 aa7.88□□□□□ -1.15
CPNE1-222ENST00000473373 BTF3P20290 206 aaKnown RBP7.88□□□□□ -1.15
CPNE1-222ENST00000473373 RPL35P42766 123 aaKnown RBP7.88□□□□□ -1.15
CPNE1-222ENST00000473373 ERVFC1-1P60608 527 aa7.88□□□□□ -1.15
CPNE1-222ENST00000473373 RPL19P84098 196 aaKnown RBP7.88□□□□□ -1.15
CPNE1-222ENST00000473373 SPANXN1Q5VSR9 72 aa7.88□□□□□ -1.15
CPNE1-222ENST00000473373 ZFP2Q6ZN57 461 aa7.88□□□□□ -1.15
CPNE1-222ENST00000473373 Q6ZNX1 250 aa7.88□□□□□ -1.15
CPNE1-222ENST00000473373 SPATA12Q7Z6I5 190 aa7.88□□□□□ -1.15
CPNE1-222ENST00000473373 JPT2Q9H910 190 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms