RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 SPTBN2O15020 2390 aa-0.32□□□□□ -2.46
COMMD3-211ENST00000472673 SOGA1O94964 1423 aa-0.32□□□□□ -2.46
COMMD3-211ENST00000472673 KIDINS220Q9ULH0 1771 aa-0.32□□□□□ -2.46
COMMD3-211ENST00000472673 AKAP6Q13023 2319 aa-0.32□□□□□ -2.46
COMMD3-211ENST00000472673 E5RI56 91 aa-0.33□□□□□ -2.46
COMMD3-211ENST00000472673 E7EQ34 232 aa-0.33□□□□□ -2.46
COMMD3-211ENST00000472673 UQCRQO14949 82 aa-0.33□□□□□ -2.46
COMMD3-211ENST00000472673 PFDN1O60925 122 aa-0.33□□□□□ -2.46
COMMD3-211ENST00000472673 FAM107AO95990 144 aa-0.33□□□□□ -2.46
COMMD3-211ENST00000472673 TCRAP04437 139 aa-0.33□□□□□ -2.46
COMMD3-211ENST00000472673 NMBP08949 121 aa-0.33□□□□□ -2.46
COMMD3-211ENST00000472673 IFITM1P13164 125 aa-0.33□□□□□ -2.46
COMMD3-211ENST00000472673 SDC4P31431 198 aa-0.33□□□□□ -2.46
COMMD3-211ENST00000472673 TEX49A0A1B0GTD5 131 aa-0.34□□□□□ -2.46
COMMD3-211ENST00000472673 ZNF670-ZNF695F2Z2N8 137 aa-0.34□□□□□ -2.46
COMMD3-211ENST00000472673 OR2H2O95918 312 aa-0.34□□□□□ -2.46
COMMD3-211ENST00000472673 PTPRGP23470 1445 aa-0.34□□□□□ -2.46
COMMD3-211ENST00000472673 TENM2Q9NT68 2774 aa-0.34□□□□□ -2.46
COMMD3-211ENST00000472673 ATPIF1Q9UII2 106 aa-0.34□□□□□ -2.46
COMMD3-211ENST00000472673 MYCBP2O75592 4640 aa-0.34□□□□□ -2.46
COMMD3-211ENST00000472673 ROCK1Q13464 1354 aa-0.34□□□□□ -2.46
COMMD3-211ENST00000472673 DOCK11Q5JSL3 2073 aa-0.34□□□□□ -2.46
COMMD3-211ENST00000472673 DOPEY2Q9Y3R5 2298 aa-0.35□□□□□ -2.47
COMMD3-211ENST00000472673 GVQW2A0A096LPI5 108 aaPredicted RBP-0.35□□□□□ -2.47
COMMD3-211ENST00000472673 C10orf142B7Z368 130 aa-0.35□□□□□ -2.47
COMMD3-211ENST00000472673 IFNA21P01568 189 aa-0.35□□□□□ -2.47
COMMD3-211ENST00000472673 APOC1P02654 83 aa-0.35□□□□□ -2.47
COMMD3-211ENST00000472673 CCDC115Q96NT0 180 aa-0.35□□□□□ -2.47
COMMD3-211ENST00000472673 BPESC1Q9GZL8 116 aa-0.35□□□□□ -2.47
COMMD3-211ENST00000472673 BET1LQ9NYM9 111 aa-0.35□□□□□ -2.47
COMMD3-211ENST00000472673 NDUFAF1Q9Y375 327 aa-0.35□□□□□ -2.47
COMMD3-211ENST00000472673 MUC2Q02817 5179 aa-0.35□□□□□ -2.47
COMMD3-211ENST00000472673 WDR97A6NE52 1622 aa-0.35□□□□□ -2.47
COMMD3-211ENST00000472673 UNC13BO14795 1591 aa-0.36□□□□□ -2.47
COMMD3-211ENST00000472673 VIRMAQ69YN4 1812 aaKnown RBP-0.36□□□□□ -2.47
COMMD3-211ENST00000472673 CXorf51AA0A1B0GTR3 108 aa-0.36□□□□□ -2.47
COMMD3-211ENST00000472673 PNMA8CA0A1B0GUJ8 204 aa-0.36□□□□□ -2.47
COMMD3-211ENST00000472673 TCRBV3S1A0A5B6 114 aa-0.36□□□□□ -2.47
COMMD3-211ENST00000472673 MCRIP1C9JLW8 97 aa-0.36□□□□□ -2.47
COMMD3-211ENST00000472673 HSD17B12Q53GQ0 312 aa-0.36□□□□□ -2.47
COMMD3-211ENST00000472673 SLC25A26Q70HW3 274 aa-0.36□□□□□ -2.47
COMMD3-211ENST00000472673 METTL1Q9UBP6 276 aaKnown RBP-0.36□□□□□ -2.47
COMMD3-211ENST00000472673 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.36□□□□□ -2.47
COMMD3-211ENST00000472673 LAMC3Q9Y6N6 1575 aa-0.36□□□□□ -2.47
COMMD3-211ENST00000472673 MAP1AP78559 2803 aaPredicted RBP-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 SRRM2Q9UQ35 2752 aaKnown RBP-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 CDK13Q14004 1512 aaKnown RBP-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 LPAP08519 4548 aa-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 TRAV12-2A0A075B6T6 113 aa-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 MT-ND4LP03901 98 aa-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 AKR1D1P51857 326 aa-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 PSPHP78330 225 aa-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 OR9Q1Q8NGQ5 310 aa-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 PPP1R1CQ8WVI7 109 aa-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 SLC35B3Q9H1N7 401 aa-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 MED23Q9ULK4 1368 aa-0.37□□□□□ -2.47
COMMD3-211ENST00000472673 A0A087WTM6 91 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 A0A1B0GW64 132 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 SLC25A6P12236 298 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 HIST1H1BP16401 226 aaKnown RBP-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 PLGLB1Q02325 96 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 TMEM128Q5BJH2 165 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 SAMD13Q5VXD3 122 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 TMEM35BQ8NCS4 154 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 PPDPFLQ8WWR9 84 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 SSC5DA1L4H1 1573 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 CASZ1Q86V15 1759 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 ARHGAP31Q2M1Z3 1444 aa-0.38□□□□□ -2.47
COMMD3-211ENST00000472673 VWFP04275 2813 aa-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 KIAA0100Q14667 2235 aaKnown RBP-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 A0A1B0GV72 72 aa-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 PGRMC1O00264 195 aaKnown RBP-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 FABP1P07148 127 aa-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 COX4I1P13073 169 aa-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 OR2T2Q6IF00 324 aa-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 CYP2G1PQ6ZSU1 146 aa-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 SNX29P2Q8IUI4 249 aa-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 SMIM11BQ8TCY0 68 aa-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 IFI27L1Q96BM0 104 aa-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 TAS2R8Q9NYW2 309 aa-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 DNAJC15Q9Y5T4 150 aa-0.39□□□□□ -2.47
COMMD3-211ENST00000472673 KDM5CP41229 1560 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 KIF13AQ9H1H9 1805 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 BSNQ9UPA5 3926 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 RBAKDNA6NC62 111 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 CFDP00746 253 aaPredicted RBP-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 APODP05090 189 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 NPC2P61916 151 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 C4orf33Q8N1A6 199 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 VPS25Q9BRG1 176 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 CALML5Q9NZT1 146 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 PLXNA2O75051 1894 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 OVOS2A0A0G2JMS6 1433 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 C2CD3Q4AC94 2353 aa-0.4□□□□□ -2.47
COMMD3-211ENST00000472673 MAP1BP46821 2468 aaKnown RBP-0.41□□□□□ -2.47
COMMD3-211ENST00000472673 DPM2O94777 84 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 PAEPP09466 180 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 CCL3L1P16619 93 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 S100GP29377 79 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms