RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 AAMDCQ9H7C9 122 aa3.72□□□□□ -1.81
SIK3-208ENST00000472648 RGS13O14921 159 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 HMGB3O15347 200 aaKnown RBP3.71□□□□□ -1.82
SIK3-208ENST00000472648 CXorf1O96002 111 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 SLC25A5P05141 298 aaKnown RBP3.71□□□□□ -1.82
SIK3-208ENST00000472648 PFN1P07737 140 aaKnown RBP3.71□□□□□ -1.82
SIK3-208ENST00000472648 SNRPCP09234 159 aaKnown RBP3.71□□□□□ -1.82
SIK3-208ENST00000472648 OR10J4P0C629 311 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 SEC11BP0C7V7 166 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 CSN1S1P47710 185 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 RAB5CP51148 216 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 LCN15Q6UWW0 184 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 PATE2Q6UY27 113 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 DPPA3Q6W0C5 159 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 MIR17HGQ75NE6 70 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 DAZ4Q86SG3 579 aaKnown RBP3.71□□□□□ -1.82
SIK3-208ENST00000472648 Q8N3U1 123 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 C9orf62Q8N4C0 152 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 CMTM2Q8TAZ6 248 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 FAM213BQ8TBF2 198 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 TMED6Q8WW62 240 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 DPH3Q96FX2 82 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 SLC50A1Q9BRV3 221 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 DAZ3Q9NR90 486 aaKnown RBP3.71□□□□□ -1.82
SIK3-208ENST00000472648 CYTL1Q9NRR1 136 aa3.71□□□□□ -1.82
SIK3-208ENST00000472648 CTXND1A0A1B0GTU2 59 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 A0A1B0GV50 99 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 H3BTX0 84 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 IFNA1P01562 189 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 H2AFB1P0C5Y9 115 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 NBEAP1P0C6P0 100 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 CT45A10P0DMU9 189 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 PYYP10082 97 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 HIST1H1EP10412 219 aaKnown RBP3.7□□□□□ -1.82
SIK3-208ENST00000472648 BTN1A1Q13410 526 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 PQLC2Q6ZP29 291 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 C9orf163Q8N9P6 203 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 SFT2D1Q8WV19 159 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 RAB24Q969Q5 203 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 SLC25A2Q9BXI2 301 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 TMEM167BQ9NRX6 74 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 TMEM14CQ9P0S9 112 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 VAX2Q9UIW0 290 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 TP53TG3Q9ULZ0 132 aa3.7□□□□□ -1.82
SIK3-208ENST00000472648 TRAV26-2A0A0B4J265 109 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 TRAV4A0A0B4J268 109 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 MAP1LC3B2A6NCE7 125 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 PRAC2D3DTV9 90 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 K7EQM0 130 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 IFNA7P01567 189 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 ARL14EPLP0DKL9 152 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 RNASE4P34096 147 aaKnown RBP3.69□□□□□ -1.82
SIK3-208ENST00000472648 FGF8P55075 233 aaPredicted RBP3.69□□□□□ -1.82
SIK3-208ENST00000472648 RAB14P61106 215 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 RANP62826 216 aaKnown RBP3.69□□□□□ -1.82
SIK3-208ENST00000472648 BLOC1S1P78537 153 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 PRR3P79522 188 aaKnown RBP3.69□□□□□ -1.82
SIK3-208ENST00000472648 PDE6HQ13956 83 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 PRR4Q16378 134 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 SPINK6Q6UWN8 80 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 ALKAL2Q6UX46 152 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 OR4C5Q8NGB2 326 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 PHYHIPLQ96FC7 376 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 RNF185Q96GF1 192 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 MAP1LC3BQ9GZQ8 125 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 GTSF1LQ9H1H1 148 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 ZNF331Q9NQX6 463 aaPredicted RBP3.69□□□□□ -1.82
SIK3-208ENST00000472648 PRELID1Q9Y255 219 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 URGCP-MRPS24S4R325 110 aa3.69□□□□□ -1.82
SIK3-208ENST00000472648 TRBV19A0A075B6N1 114 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 IGHV1OR15-1A0A075B7D0 117 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 A0A087WYN8 130 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 IGHV3-16A0A0C4DH30 117 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 FAM231BA6NCW3 169 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 PGPA6NDG6 321 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 KLLNB2CW77 178 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 F6UZH7 168 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 H3BQ15 152 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 EIF3GO75821 320 aaKnown RBP eCLIP3.68□□□□□ -1.82
SIK3-208ENST00000472648 GPX1P07203 203 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 STAG3L2P0CL84 134 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 STAG3L3P0CL85 134 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 GCHFRP30047 84 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 UBE2G2P60604 165 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 CST9LP1Q5W188 147 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 DGAT2L7PQ6IED9 249 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 PRADC1Q9BSG0 188 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 NKX6-2Q9C056 277 aaPredicted RBP3.68□□□□□ -1.82
SIK3-208ENST00000472648 OTORQ9NRC9 128 aa3.68□□□□□ -1.82
SIK3-208ENST00000472648 USP17L23D6RBM5 183 aa3.67□□□□□ -1.82
SIK3-208ENST00000472648 H7C1H1 209 aa3.67□□□□□ -1.82
SIK3-208ENST00000472648 ZNF253O75346 499 aa3.67□□□□□ -1.82
SIK3-208ENST00000472648 IGLC2P0DOY2 106 aa3.67□□□□□ -1.82
SIK3-208ENST00000472648 FHITP49789 147 aa3.67□□□□□ -1.82
SIK3-208ENST00000472648 SULT1A2P50226 295 aa3.67□□□□□ -1.82
SIK3-208ENST00000472648 RPL19P84098 196 aaKnown RBP3.67□□□□□ -1.82
SIK3-208ENST00000472648 CIRBPQ14011 172 aaKnown RBP3.67□□□□□ -1.82
SIK3-208ENST00000472648 RHOHQ15669 191 aa3.67□□□□□ -1.82
SIK3-208ENST00000472648 TMEM78Q5T7P6 136 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms