RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 STX12Q86Y82 276 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 Q8N976 141 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 TMEM75Q8N9X5 138 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 SGK494Q96LW2 274 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 C9orf85Q96MD7 179 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 SAMD10Q9BYL1 202 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 WDR61Q9GZS3 305 aaKnown RBP6.04□□□□□ -1.44
VCL-204ENST00000472585 DPH3P1Q9H4G8 78 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 OR5AC2Q9NZP5 309 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 GAGE12JA6NER3 117 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 SIX6O95475 246 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 RNASE3P12724 160 aaKnown RBP6.03□□□□□ -1.44
VCL-204ENST00000472585 PVALBP20472 110 aaPredicted RBP6.03□□□□□ -1.44
VCL-204ENST00000472585 GNG5P63218 68 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 GAGE1Q13065 139 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 GAGE4Q13068 117 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 GAGE5Q13069 117 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 RHOHQ15669 191 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 GAGE13Q4V321 117 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 ZNF506Q5JVG8 444 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 Q6ZRU5 148 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 GOLT1AQ6ZVE7 132 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 ASB13Q8WXK3 278 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 PRADC1Q9BSG0 188 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 KRTAP9-9Q9BYP9 154 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 JPT2Q9H910 190 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 RPH3ALQ9UNE2 315 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 COX11Q9Y6N1 276 aa6.03□□□□□ -1.44
VCL-204ENST00000472585 TNXBP22105 4242 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 TRAV21A0A0B4J279 112 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 CENPXA8MT69 81 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 PANO1I0J062 215 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 LYRM1O43325 122 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 UBE2L3P68036 154 aaKnown RBP6.02□□□□□ -1.45
VCL-204ENST00000472585 CNPY1Q3B7I2 92 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 TOR2AQ5JU69 321 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 UFSP1Q6NVU6 142 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 SDF2L1Q9HCN8 221 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 TREM1Q9NP99 234 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 OTORQ9NRC9 128 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 NUDT15Q9NV35 164 aa6.02□□□□□ -1.45
VCL-204ENST00000472585 GAS8-AS1O95177 125 aa6.01□□□□□ -1.45
VCL-204ENST00000472585 ODF1Q14990 250 aa6.01□□□□□ -1.45
VCL-204ENST00000472585 C14orf178Q8N769 122 aaPredicted RBP6.01□□□□□ -1.45
VCL-204ENST00000472585 OR2T35Q8NGX2 323 aa6.01□□□□□ -1.45
VCL-204ENST00000472585 PTH2Q96A98 100 aa6.01□□□□□ -1.45
VCL-204ENST00000472585 LINC00479Q96M42 142 aa6.01□□□□□ -1.45
VCL-204ENST00000472585 MBD2Q9UBB5 411 aa6.01□□□□□ -1.45
VCL-204ENST00000472585 CCDC160A6NGH7 325 aa6□□□□□ -1.45
VCL-204ENST00000472585 GGTLC3B5MD39 225 aa6□□□□□ -1.45
VCL-204ENST00000472585 CIDEAO60543 219 aa6□□□□□ -1.45
VCL-204ENST00000472585 MGST1P10620 155 aaKnown RBP6□□□□□ -1.45
VCL-204ENST00000472585 FFAR4Q5NUL3 377 aa6□□□□□ -1.45
VCL-204ENST00000472585 NIT1Q86X76 327 aa6□□□□□ -1.45
VCL-204ENST00000472585 RMI2Q96E14 147 aa6□□□□□ -1.45
VCL-204ENST00000472585 KCNS1Q96KK3 526 aa6□□□□□ -1.45
VCL-204ENST00000472585 NMES1Q9C002 83 aa6□□□□□ -1.45
VCL-204ENST00000472585 PARLQ9H300 379 aa6□□□□□ -1.45
VCL-204ENST00000472585 WFDC1Q9HC57 220 aa6□□□□□ -1.45
VCL-204ENST00000472585 KLK12Q9UKR0 248 aa6□□□□□ -1.45
VCL-204ENST00000472585 IGKV2D-24A0A075B6R9 120 aa5.99□□□□□ -1.45
VCL-204ENST00000472585 IGKV3D-20A0A0C4DH25 116 aa5.99□□□□□ -1.45
VCL-204ENST00000472585 HMGB3O15347 200 aaKnown RBP5.99□□□□□ -1.45
VCL-204ENST00000472585 ATRAIDQ6UW56 229 aa5.99□□□□□ -1.45
VCL-204ENST00000472585 CYB561D1Q8N8Q1 229 aa5.99□□□□□ -1.45
VCL-204ENST00000472585 HSD17B11Q8NBQ5 300 aa5.99□□□□□ -1.45
VCL-204ENST00000472585 GCGP01275 180 aa5.98□□□□□ -1.45
VCL-204ENST00000472585 LRRC37A5PQ49AS3 106 aa5.98□□□□□ -1.45
VCL-204ENST00000472585 KHDC3LQ587J8 217 aa5.98□□□□□ -1.45
VCL-204ENST00000472585 ENHOQ6UWT2 76 aa5.98□□□□□ -1.45
VCL-204ENST00000472585 ZFP2Q6ZN57 461 aa5.98□□□□□ -1.45
VCL-204ENST00000472585 ARL6IP6Q8N6S5 226 aa5.98□□□□□ -1.45
VCL-204ENST00000472585 UBE2WQ96B02 151 aa5.98□□□□□ -1.45
VCL-204ENST00000472585 SH3BGRL3Q9H299 93 aa5.98□□□□□ -1.45
VCL-204ENST00000472585 A0A0D9SG52 128 aa5.97□□□□□ -1.45
VCL-204ENST00000472585 TAAR5O14804 337 aa5.97□□□□□ -1.45
VCL-204ENST00000472585 PRSS1P07477 247 aa5.97□□□□□ -1.45
VCL-204ENST00000472585 RAB2AP61019 212 aa5.97□□□□□ -1.45
VCL-204ENST00000472585 C14orf177Q52M58 125 aa5.97□□□□□ -1.45
VCL-204ENST00000472585 CMTM2Q8TAZ6 248 aa5.97□□□□□ -1.45
VCL-204ENST00000472585 ATP5SQ99766 215 aa5.97□□□□□ -1.45
VCL-204ENST00000472585 SMIM3Q9BZL3 60 aa5.97□□□□□ -1.45
VCL-204ENST00000472585 PSG8Q9UQ74 426 aa5.97□□□□□ -1.45
VCL-204ENST00000472585 A0A087WWC5 75 aa5.96□□□□□ -1.46
VCL-204ENST00000472585 C17orf112F2Z3M2 114 aa5.96□□□□□ -1.46
VCL-204ENST00000472585 TCRAP04437 139 aa5.96□□□□□ -1.46
VCL-204ENST00000472585 H2BFSP57053 126 aa5.96□□□□□ -1.46
VCL-204ENST00000472585 BATF3Q9NR55 127 aa5.96□□□□□ -1.46
VCL-204ENST00000472585 A8MWV9 139 aa5.95□□□□□ -1.46
VCL-204ENST00000472585 SEC11BP0C7V7 166 aa5.95□□□□□ -1.46
VCL-204ENST00000472585 CRIP1P50238 77 aa5.95□□□□□ -1.46
VCL-204ENST00000472585 TAS2R45P59539 299 aa5.95□□□□□ -1.46
VCL-204ENST00000472585 LGALSLQ3ZCW2 172 aaPredicted RBP5.95□□□□□ -1.46
VCL-204ENST00000472585 KRTAP26-1Q6PEX3 210 aa5.95□□□□□ -1.46
VCL-204ENST00000472585 SDIM1Q6ZPB5 146 aa5.95□□□□□ -1.46
VCL-204ENST00000472585 SUN5Q8TC36 379 aa5.95□□□□□ -1.46
VCL-204ENST00000472585 KCNIP2Q9NS61 270 aa5.95□□□□□ -1.46
VCL-204ENST00000472585 HSPB11Q9Y547 144 aa5.95□□□□□ -1.46
VCL-204ENST00000472585 URGCP-MRPS24S4R325 110 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms