RNA–Protein interactions for RNA: ENST00000472339.5

FXR1-209, Transcript of FMR1 autosomal homolog 1, human

TSL 5

Gene FXR1, Length 2,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-209	ENST00000472339	IGLV4-69	A0A075B6H9	119 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339		A0A0J9YY99	117 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	C11orf86	A6NJI1	115 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	DUSP14	O95147	198 aa	Known RBP	11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	SAA4	P35542	130 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	ZFP2	Q6ZN57	461 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	NDUFA11	Q86Y39	141 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	KLHL30-AS1	Q8NEE0	82 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	FAM19A4	Q96LR4	140 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	TRBV20-1	A0A075B6N2	111 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	FAM223B	A6NKX1	122 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	CRYBA4	P53673	196 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	APRG1	Q8IVJ8	170 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	FAM223A	Q8IWN6	122 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	ZNF418	Q8TF45	676 aa	Predicted RBP	11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	PPDPFL	Q8WWR9	84 aa		11.23	□□□□□ -0.61
FXR1-209	ENST00000472339	SOCS3	O14543	225 aa		11.22	□□□□□ -0.61
FXR1-209	ENST00000472339	NXPH4	O95158	308 aa		11.22	□□□□□ -0.61
FXR1-209	ENST00000472339	TEN1	Q86WV5	123 aa		11.22	□□□□□ -0.61
FXR1-209	ENST00000472339	C5orf56	Q8N8D9	126 aa		11.22	□□□□□ -0.61
FXR1-209	ENST00000472339	ABCA4	P78363	2273 aa		11.21	□□□□□ -0.61
FXR1-209	ENST00000472339	IGHV4OR15-8	A0A075B7B6	117 aa		11.21	□□□□□ -0.61
FXR1-209	ENST00000472339		A0A087WW49	117 aa		11.21	□□□□□ -0.61
FXR1-209	ENST00000472339	TRBV7-9	A0A0J9YWB2	115 aa		11.21	□□□□□ -0.61
FXR1-209	ENST00000472339	IGIP	A6NJ69	53 aa		11.21	□□□□□ -0.61
FXR1-209	ENST00000472339	TSHB	P01222	138 aa		11.21	□□□□□ -0.61
FXR1-209	ENST00000472339	RNASE3	P12724	160 aa	Known RBP	11.21	□□□□□ -0.61
FXR1-209	ENST00000472339	PMVK	Q15126	192 aa		11.21	□□□□□ -0.61
FXR1-209	ENST00000472339	TMEM141	Q96I45	108 aa		11.21	□□□□□ -0.61
FXR1-209	ENST00000472339	TP53TG1	Q9Y2A0	90 aa		11.21	□□□□□ -0.61
FXR1-209	ENST00000472339	AKAP13	Q12802	2813 aa		11.21	□□□□□ -0.61
FXR1-209	ENST00000472339	DMXL1	Q9Y485	3027 aa		11.21	□□□□□ -0.62
FXR1-209	ENST00000472339	SPINK8	P0C7L1	97 aa		11.21	□□□□□ -0.62
FXR1-209	ENST00000472339	RNASE4	P34096	147 aa	Known RBP	11.21	□□□□□ -0.62
FXR1-209	ENST00000472339	ARL3	P36405	182 aa		11.21	□□□□□ -0.62
FXR1-209	ENST00000472339	SBSPON	Q8IVN8	264 aa		11.21	□□□□□ -0.62
FXR1-209	ENST00000472339	TRAV41	A0A0B4J266	112 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	CCL21	O00585	134 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	GNRH2	O43555	120 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	SFTA2	Q6UW10	78 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	KIF25-AS1	Q9Y6Z4	181 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	TCL1B	O95988	128 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	IGHV3-30	P01768	117 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	IGHV3-30-5	P0DP03	117 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	LINC00315	P59091	139 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	C19orf54	Q5BKX5	351 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	SLC25A29	Q8N8R3	303 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	CARD19	Q96LW7	228 aa		11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	GEMIN7	Q9H840	131 aa	Known RBP	11.2	□□□□□ -0.62
FXR1-209	ENST00000472339	CSMD1	Q96PZ7	3565 aa		11.19	□□□□□ -0.62
FXR1-209	ENST00000472339	NDUFA4	O00483	81 aa		11.19	□□□□□ -0.62
FXR1-209	ENST00000472339	CFC1B	P0CG36	223 aa		11.19	□□□□□ -0.62
FXR1-209	ENST00000472339	CFC1	P0CG37	223 aa		11.19	□□□□□ -0.62
FXR1-209	ENST00000472339	POLR2K	P53803	58 aa	Known RBP	11.19	□□□□□ -0.62
FXR1-209	ENST00000472339	FHL3	Q13643	280 aa		11.19	□□□□□ -0.62
FXR1-209	ENST00000472339		Q6ZUT4	128 aa		11.19	□□□□□ -0.62
FXR1-209	ENST00000472339	TIMM17A	Q99595	171 aa		11.19	□□□□□ -0.62
FXR1-209	ENST00000472339		A8MWV9	139 aa		11.18	□□□□□ -0.62
FXR1-209	ENST00000472339	C10orf126	Q8N4M7	172 aa		11.18	□□□□□ -0.62
FXR1-209	ENST00000472339	PTH2	Q96A98	100 aa		11.18	□□□□□ -0.62
FXR1-209	ENST00000472339	ATM	Q13315	3056 aa		11.18	□□□□□ -0.62
FXR1-209	ENST00000472339	VCY	O14598	125 aa		11.18	□□□□□ -0.62
FXR1-209	ENST00000472339	NPFF	O15130	113 aa		11.18	□□□□□ -0.62
FXR1-209	ENST00000472339	MT-ATP8	P03928	68 aa		11.18	□□□□□ -0.62
FXR1-209	ENST00000472339	CRIP2	P52943	208 aa	Predicted RBP	11.18	□□□□□ -0.62
FXR1-209	ENST00000472339	CDSN	Q15517	529 aa		11.18	□□□□□ -0.62
FXR1-209	ENST00000472339	UNQ9165/PRO28630	Q6UXU0	137 aa		11.18	□□□□□ -0.62
FXR1-209	ENST00000472339	EMP1	P54849	157 aa		11.17	□□□□□ -0.62
FXR1-209	ENST00000472339	XG	P55808	180 aa		11.17	□□□□□ -0.62
FXR1-209	ENST00000472339	DEFB1	P60022	68 aa		11.17	□□□□□ -0.62
FXR1-209	ENST00000472339		Q6ZS46	218 aa		11.17	□□□□□ -0.62
FXR1-209	ENST00000472339	KIR2DL4	Q99706	377 aa		11.17	□□□□□ -0.62
FXR1-209	ENST00000472339	TSPEAR-AS2	P59090	65 aa		11.17	□□□□□ -0.62
FXR1-209	ENST00000472339	PRO1854	Q9UHT4	67 aa		11.17	□□□□□ -0.62
FXR1-209	ENST00000472339	MOB4	Q9Y3A3	225 aa		11.17	□□□□□ -0.62
FXR1-209	ENST00000472339	DCHS2	Q6V1P9	2916 aa		11.17	□□□□□ -0.62
FXR1-209	ENST00000472339		K7ENP7	123 aa		11.16	□□□□□ -0.62
FXR1-209	ENST00000472339	ZNF876P	Q49A33	203 aa		11.16	□□□□□ -0.62
FXR1-209	ENST00000472339	TMEM170B	Q5T4T1	132 aa		11.16	□□□□□ -0.62
FXR1-209	ENST00000472339	SUMO4	Q6EEV6	95 aa		11.16	□□□□□ -0.62
FXR1-209	ENST00000472339	CLUHP3	Q96NS8	147 aa		11.16	□□□□□ -0.62
FXR1-209	ENST00000472339	TRAV26-1	A0A087WT03	109 aa		11.15	□□□□□ -0.62
FXR1-209	ENST00000472339	ZNF688	P0C7X2	276 aa		11.15	□□□□□ -0.62
FXR1-209	ENST00000472339	ADORA2A-AS1	P86434	159 aa		11.15	□□□□□ -0.62
FXR1-209	ENST00000472339	AMELX	Q99217	191 aa		11.15	□□□□□ -0.62
FXR1-209	ENST00000472339	GVINP1	Q7Z2Y8	2422 aa		11.15	□□□□□ -0.62
FXR1-209	ENST00000472339		F6UB75	175 aa		11.15	□□□□□ -0.62
FXR1-209	ENST00000472339	TRBV12-3	P01733	135 aa		11.15	□□□□□ -0.62
FXR1-209	ENST00000472339	RPL39	P62891	51 aa	Known RBP	11.15	□□□□□ -0.62
FXR1-209	ENST00000472339	ZNRF2	Q8NHG8	242 aa		11.15	□□□□□ -0.62
FXR1-209	ENST00000472339	MUC4	Q99102	2169 aa		11.15	□□□□□ -0.63
FXR1-209	ENST00000472339	LRBA	P50851	2863 aa		11.14	□□□□□ -0.63
FXR1-209	ENST00000472339		J3QQQ9	107 aa		11.14	□□□□□ -0.63
FXR1-209	ENST00000472339		M0QXV9	152 aa		11.14	□□□□□ -0.63
FXR1-209	ENST00000472339	SCGB1C2	P0DMR2	95 aa		11.14	□□□□□ -0.63
FXR1-209	ENST00000472339	TMEM219	Q86XT9	240 aa		11.14	□□□□□ -0.63
FXR1-209	ENST00000472339	LINC00527	Q9UJ94	153 aa		11.14	□□□□□ -0.63
FXR1-209	ENST00000472339	TMEM262	E9PQX1	116 aa		11.14	□□□□□ -0.63
FXR1-209	ENST00000472339	LGALS3	P17931	250 aa	Known RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms