RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 RNASE3P12724 160 aaKnown RBP12.08□□□□□ -0.48
CCM2-205ENST00000472223 RNF212Q495C1 297 aa12.08□□□□□ -0.48
CCM2-205ENST00000472223 ZNF876PQ49A33 203 aa12.08□□□□□ -0.48
CCM2-205ENST00000472223 SPANXN1Q5VSR9 72 aa12.08□□□□□ -0.48
CCM2-205ENST00000472223 IL17DQ8TAD2 202 aa12.08□□□□□ -0.48
CCM2-205ENST00000472223 TSKUQ8WUA8 353 aa12.08□□□□□ -0.48
CCM2-205ENST00000472223 C9orf85Q96MD7 179 aa12.08□□□□□ -0.48
CCM2-205ENST00000472223 GFRA4Q9GZZ7 299 aa12.08□□□□□ -0.48
CCM2-205ENST00000472223 PLAC8L1A1L4L8 177 aa12.07□□□□□ -0.48
CCM2-205ENST00000472223 SPINK4O60575 86 aa12.07□□□□□ -0.48
CCM2-205ENST00000472223 OR5AL1P0C617 328 aa12.07□□□□□ -0.48
CCM2-205ENST00000472223 CACNG7P62955 275 aa12.07□□□□□ -0.48
CCM2-205ENST00000472223 RHEBQ15382 184 aa12.07□□□□□ -0.48
CCM2-205ENST00000472223 ZFP82Q8N141 532 aa12.07□□□□□ -0.48
CCM2-205ENST00000472223 CLRN3Q8NCR9 226 aa12.07□□□□□ -0.48
CCM2-205ENST00000472223 NDUFAF3Q9BU61 184 aa12.07□□□□□ -0.48
CCM2-205ENST00000472223 CTDSP1Q9GZU7 261 aa12.07□□□□□ -0.48
CCM2-205ENST00000472223 V9GYV3 84 aa12.07□□□□□ -0.48
CCM2-205ENST00000472223 GAGE12BA1L429 117 aa12.06□□□□□ -0.48
CCM2-205ENST00000472223 GAGE7O76087 117 aa12.06□□□□□ -0.48
CCM2-205ENST00000472223 GAGE12FP0CL80 117 aa12.06□□□□□ -0.48
CCM2-205ENST00000472223 GAGE12GP0CL81 117 aa12.06□□□□□ -0.48
CCM2-205ENST00000472223 GAGE12IP0CL82 117 aa12.06□□□□□ -0.48
CCM2-205ENST00000472223 PTH2Q96A98 100 aa12.06□□□□□ -0.48
CCM2-205ENST00000472223 MRPL16Q9NX20 251 aaKnown RBP12.06□□□□□ -0.48
CCM2-205ENST00000472223 NAT8BQ9UHF3 227 aa12.06□□□□□ -0.48
CCM2-205ENST00000472223 M0R381 172 aa12.05□□□□□ -0.48
CCM2-205ENST00000472223 SNAI2O43623 268 aa12.05□□□□□ -0.48
CCM2-205ENST00000472223 PIK3CD-AS1Q5SR53 167 aa12.05□□□□□ -0.48
CCM2-205ENST00000472223 LYZL1Q6UWQ5 148 aa12.05□□□□□ -0.48
CCM2-205ENST00000472223 RASL10AQ92737 203 aa12.05□□□□□ -0.48
CCM2-205ENST00000472223 SSBP4Q9BWG4 385 aaPredicted RBP12.05□□□□□ -0.48
CCM2-205ENST00000472223 RPS10P5Q9NQ39 176 aa12.05□□□□□ -0.48
CCM2-205ENST00000472223 PRKDCP78527 4128 aaKnown RBP12.05□□□□□ -0.48
CCM2-205ENST00000472223 DNAH9Q9NYC9 4486 aa12.04□□□□□ -0.48
CCM2-205ENST00000472223 IGLC6P0CF74 106 aa12.04□□□□□ -0.48
CCM2-205ENST00000472223 SSTP61278 116 aa12.04□□□□□ -0.48
CCM2-205ENST00000472223 WDR73Q6P4I2 378 aa12.04□□□□□ -0.48
CCM2-205ENST00000472223 KCNIP4Q6PIL6 250 aa12.04□□□□□ -0.48
CCM2-205ENST00000472223 Q6ZTI0 123 aa12.04□□□□□ -0.48
CCM2-205ENST00000472223 PGLYRP4Q96LB8 373 aa12.04□□□□□ -0.48
CCM2-205ENST00000472223 SCRT2Q9NQ03 307 aa12.04□□□□□ -0.48
CCM2-205ENST00000472223 C7orf77A4D0Y5 90 aa12.03□□□□□ -0.48
CCM2-205ENST00000472223 HIGD1CA8MV81 97 aa12.03□□□□□ -0.48
CCM2-205ENST00000472223 A8MWV9 139 aa12.03□□□□□ -0.48
CCM2-205ENST00000472223 S100PP25815 95 aa12.03□□□□□ -0.48
CCM2-205ENST00000472223 SMIM15Q7Z3B0 74 aa12.03□□□□□ -0.48
CCM2-205ENST00000472223 OR4C5Q8NGB2 326 aa12.03□□□□□ -0.48
CCM2-205ENST00000472223 CELA1Q9UNI1 258 aa12.03□□□□□ -0.48
CCM2-205ENST00000472223 COL7A1Q02388 2944 aa12.03□□□□□ -0.48
CCM2-205ENST00000472223 A0A087WWC5 75 aa12.02□□□□□ -0.49
CCM2-205ENST00000472223 SMIM27A0A1W2PRY6 76 aa12.02□□□□□ -0.49
CCM2-205ENST00000472223 CIDEAO60543 219 aa12.02□□□□□ -0.49
CCM2-205ENST00000472223 SMIM17P0DL12 118 aa12.02□□□□□ -0.49
CCM2-205ENST00000472223 FOXA3P55318 350 aaPredicted RBP12.02□□□□□ -0.49
CCM2-205ENST00000472223 TWIST1Q15672 202 aa12.02□□□□□ -0.49
CCM2-205ENST00000472223 ZNF575Q86XF7 245 aa12.02□□□□□ -0.49
CCM2-205ENST00000472223 OR10AG1Q8NH19 301 aa12.02□□□□□ -0.49
CCM2-205ENST00000472223 GTSF1Q8WW33 167 aa12.02□□□□□ -0.49
CCM2-205ENST00000472223 EDA2RQ9HAV5 297 aa12.02□□□□□ -0.49
CCM2-205ENST00000472223 TMEM242Q9NWH2 141 aa12.02□□□□□ -0.49
CCM2-205ENST00000472223 MUC21A0A0G2JKD1 596 aa12.01□□□□□ -0.49
CCM2-205ENST00000472223 MUC21A0A140T8X8 626 aa12.01□□□□□ -0.49
CCM2-205ENST00000472223 ATP5G1P05496 136 aa12.01□□□□□ -0.49
CCM2-205ENST00000472223 TRGC1P0CF51 173 aa12.01□□□□□ -0.49
CCM2-205ENST00000472223 CTRLP40313 264 aa12.01□□□□□ -0.49
CCM2-205ENST00000472223 NANOS2P60321 138 aaKnown RBP12.01□□□□□ -0.49
CCM2-205ENST00000472223 RIGQ13278 110 aa12.01□□□□□ -0.49
CCM2-205ENST00000472223 DMRTA1Q5VZB9 504 aa12.01□□□□□ -0.49
CCM2-205ENST00000472223 IMMP2LQ96T52 175 aa12.01□□□□□ -0.49
CCM2-205ENST00000472223 HUWE1Q7Z6Z7 4374 aaKnown RBP12.01□□□□□ -0.49
CCM2-205ENST00000472223 TENM3Q9P273 2699 aa12□□□□□ -0.49
CCM2-205ENST00000472223 A0A1B0GUT8 65 aa12□□□□□ -0.49
CCM2-205ENST00000472223 NTF3P20783 257 aa12□□□□□ -0.49
CCM2-205ENST00000472223 C12orf74Q32Q52 190 aa12□□□□□ -0.49
CCM2-205ENST00000472223 LINC00612Q8N6U2 182 aa12□□□□□ -0.49
CCM2-205ENST00000472223 NUP35Q8NFH5 326 aa12□□□□□ -0.49
CCM2-205ENST00000472223 C18orf15Q96N68 181 aa12□□□□□ -0.49
CCM2-205ENST00000472223 AP1S3Q96PC3 154 aa12□□□□□ -0.49
CCM2-205ENST00000472223 TRAV4A0A0B4J268 109 aa11.99□□□□□ -0.49
CCM2-205ENST00000472223 S100A8P05109 93 aa11.99□□□□□ -0.49
CCM2-205ENST00000472223 HTN3P15516 51 aa11.99□□□□□ -0.49
CCM2-205ENST00000472223 MUC4Q99102 2169 aa11.99□□□□□ -0.49
CCM2-205ENST00000472223 IGHV4-4A0A075B6R2 117 aa11.98□□□□□ -0.49
CCM2-205ENST00000472223 TRAV10A0A0B4J240 114 aa11.98□□□□□ -0.49
CCM2-205ENST00000472223 TRGV4A0A0C4DH28 118 aa11.98□□□□□ -0.49
CCM2-205ENST00000472223 A0A1B0GW15 77 aa11.98□□□□□ -0.49
CCM2-205ENST00000472223 RHODO00212 210 aa11.98□□□□□ -0.49
CCM2-205ENST00000472223 Q6ZTC4 211 aa11.98□□□□□ -0.49
CCM2-205ENST00000472223 WWC2-AS2Q96NR7 200 aa11.98□□□□□ -0.49
CCM2-205ENST00000472223 DEFB131BA0A096LNP1 70 aa11.97□□□□□ -0.49
CCM2-205ENST00000472223 F5H768 121 aa11.97□□□□□ -0.49
CCM2-205ENST00000472223 RS1O15537 224 aa11.97□□□□□ -0.49
CCM2-205ENST00000472223 NXPH4O95158 308 aa11.97□□□□□ -0.49
CCM2-205ENST00000472223 IGHV3-53P01767 116 aa11.97□□□□□ -0.49
CCM2-205ENST00000472223 SLAQ13239 276 aa11.97□□□□□ -0.49
CCM2-205ENST00000472223 BTF3L4Q96K17 158 aa11.97□□□□□ -0.49
CCM2-205ENST00000472223 CNFNQ9BYD5 112 aa11.97□□□□□ -0.49
CCM2-205ENST00000472223 S100A1P23297 94 aa11.96□□□□□ -0.49
CCM2-205ENST00000472223 FAM3BP58499 235 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms