RNA–Protein interactions for RNA: ENST00000472173.5

LONRF3-205, Transcript of LON peptidase N-terminal domain and ring finger 3, human

TSL 5

Gene LONRF3, Length 2,685 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LONRF3-205	ENST00000472173	PHLDA3	Q9Y5J5	127 aa		13.57	□□□□□ -0.24
LONRF3-205	ENST00000472173	C11orf86	A6NJI1	115 aa		13.56	□□□□□ -0.24
LONRF3-205	ENST00000472173	CD7	P09564	240 aa		13.56	□□□□□ -0.24
LONRF3-205	ENST00000472173	KIR2DL4	Q99706	377 aa		13.56	□□□□□ -0.24
LONRF3-205	ENST00000472173	CRYGD	P07320	174 aa		13.56	□□□□□ -0.24
LONRF3-205	ENST00000472173	DPH3P1	Q9H4G8	78 aa		13.56	□□□□□ -0.24
LONRF3-205	ENST00000472173	UBE2D3	P61077	147 aa		13.55	□□□□□ -0.24
LONRF3-205	ENST00000472173	UBE2D2	P62837	147 aa		13.55	□□□□□ -0.24
LONRF3-205	ENST00000472173	NDUFA11	Q86Y39	141 aa		13.55	□□□□□ -0.24
LONRF3-205	ENST00000472173	TIMD4	Q96H15	378 aa		13.55	□□□□□ -0.24
LONRF3-205	ENST00000472173	GNRH2	O43555	120 aa		13.54	□□□□□ -0.24
LONRF3-205	ENST00000472173	IGF2-AS	Q6U949	168 aa		13.54	□□□□□ -0.24
LONRF3-205	ENST00000472173	LINC00527	Q9UJ94	153 aa		13.54	□□□□□ -0.24
LONRF3-205	ENST00000472173	GATA3	P23771	443 aa		13.54	□□□□□ -0.24
LONRF3-205	ENST00000472173	ARL3	P36405	182 aa		13.54	□□□□□ -0.24
LONRF3-205	ENST00000472173	ANXA2R	Q3ZCQ2	193 aa		13.54	□□□□□ -0.24
LONRF3-205	ENST00000472173		A0A0J9YY99	117 aa		13.53	□□□□□ -0.24
LONRF3-205	ENST00000472173	TSPEAR-AS2	P59090	65 aa		13.53	□□□□□ -0.24
LONRF3-205	ENST00000472173	PPDPFL	Q8WWR9	84 aa		13.53	□□□□□ -0.24
LONRF3-205	ENST00000472173	IGKV3-7	A0A075B6H7	116 aa		13.53	□□□□□ -0.24
LONRF3-205	ENST00000472173	TSHB	P01222	138 aa		13.53	□□□□□ -0.24
LONRF3-205	ENST00000472173	ZFP36	P26651	326 aa	Known RBP	13.53	□□□□□ -0.24
LONRF3-205	ENST00000472173	RPL39	P62891	51 aa	Known RBP	13.53	□□□□□ -0.24
LONRF3-205	ENST00000472173	EBI3	Q14213	229 aa		13.53	□□□□□ -0.24
LONRF3-205	ENST00000472173	TEN1	Q86WV5	123 aa		13.53	□□□□□ -0.24
LONRF3-205	ENST00000472173	TP53TG1	Q9Y2A0	90 aa		13.53	□□□□□ -0.24
LONRF3-205	ENST00000472173	SPTA1	P02549	2419 aa		13.52	□□□□□ -0.24
LONRF3-205	ENST00000472173	IGLV4-69	A0A075B6H9	119 aa		13.52	□□□□□ -0.24
LONRF3-205	ENST00000472173		F6UB75	175 aa		13.52	□□□□□ -0.24
LONRF3-205	ENST00000472173	ASIP	P42127	132 aa		13.52	□□□□□ -0.24
LONRF3-205	ENST00000472173	ZFAND2A	Q8N6M9	145 aa		13.52	□□□□□ -0.24
LONRF3-205	ENST00000472173	RNF183	Q96D59	192 aa		13.52	□□□□□ -0.24
LONRF3-205	ENST00000472173	ZNF292	O60281	2723 aa		13.52	□□□□□ -0.24
LONRF3-205	ENST00000472173	SCGB1C2	P0DMR2	95 aa		13.52	□□□□□ -0.25
LONRF3-205	ENST00000472173	RNASE4	P34096	147 aa	Known RBP	13.52	□□□□□ -0.25
LONRF3-205	ENST00000472173	CFC1B	P0CG36	223 aa		13.51	□□□□□ -0.25
LONRF3-205	ENST00000472173	CFC1	P0CG37	223 aa		13.51	□□□□□ -0.25
LONRF3-205	ENST00000472173	EEF1AKMT3	Q96AZ1	226 aa		13.51	□□□□□ -0.25
LONRF3-205	ENST00000472173	MRPL53	Q96EL3	112 aa	Known RBP	13.51	□□□□□ -0.25
LONRF3-205	ENST00000472173	ANKRD29	Q8N6D5	301 aa		13.51	□□□□□ -0.25
LONRF3-205	ENST00000472173	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.5	□□□□□ -0.25
LONRF3-205	ENST00000472173	TMEM170B	Q5T4T1	132 aa		13.5	□□□□□ -0.25
LONRF3-205	ENST00000472173	GPHB5	Q86YW7	130 aa		13.5	□□□□□ -0.25
LONRF3-205	ENST00000472173	JPT2	Q9H910	190 aa		13.5	□□□□□ -0.25
LONRF3-205	ENST00000472173	MUC4	Q99102	2169 aa		13.5	□□□□□ -0.25
LONRF3-205	ENST00000472173		A8MWV9	139 aa		13.49	□□□□□ -0.25
LONRF3-205	ENST00000472173	RAX2	Q96IS3	184 aa		13.49	□□□□□ -0.25
LONRF3-205	ENST00000472173	CELSR1	Q9NYQ6	3014 aa		13.49	□□□□□ -0.25
LONRF3-205	ENST00000472173	TRAV21	A0A0B4J279	112 aa		13.49	□□□□□ -0.25
LONRF3-205	ENST00000472173		H7C2G1	150 aa		13.49	□□□□□ -0.25
LONRF3-205	ENST00000472173	IGHV3-30	P01768	117 aa		13.48	□□□□□ -0.25
LONRF3-205	ENST00000472173	IGHV3-30-5	P0DP03	117 aa		13.48	□□□□□ -0.25
LONRF3-205	ENST00000472173	SVIP	Q8NHG7	77 aa		13.48	□□□□□ -0.25
LONRF3-205	ENST00000472173	HERVK_113	P61574	105 aa		13.48	□□□□□ -0.25
LONRF3-205	ENST00000472173	RPL11	P62913	178 aa	Known RBP	13.48	□□□□□ -0.25
LONRF3-205	ENST00000472173	OR10J6P	Q8NGY7	276 aa		13.48	□□□□□ -0.25
LONRF3-205	ENST00000472173	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.48	□□□□□ -0.25
LONRF3-205	ENST00000472173	AKAP6	Q13023	2319 aa		13.48	□□□□□ -0.25
LONRF3-205	ENST00000472173	MINOS1	Q5TGZ0	78 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	UNQ9165/PRO28630	Q6UXU0	137 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	MINOS1-NBL1	R4GNA1	71 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173		U3KQE9	123 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	ZNF688	P0C7X2	276 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	RNASE3	P12724	160 aa	Known RBP	13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	CRIP2	P52943	208 aa	Predicted RBP	13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	LYRM7	Q5U5X0	104 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	CENPVL3	A0A0U1RRI6	287 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	OOSP1	A8MZH6	123 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	CDSN	Q15517	529 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	C9orf139	Q6ZV77	190 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	TRPT1	Q86TN4	253 aa	Known RBP	13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	TMEM219	Q86XT9	240 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	C10orf126	Q8N4M7	172 aa		13.47	□□□□□ -0.25
LONRF3-205	ENST00000472173	TRBV12-3	P01733	135 aa		13.46	□□□□□ -0.25
LONRF3-205	ENST00000472173	ZNRF2	Q8NHG8	242 aa		13.46	□□□□□ -0.25
LONRF3-205	ENST00000472173		A0A087WWL8	130 aa		13.46	□□□□□ -0.26
LONRF3-205	ENST00000472173	IGHV3-64	A0A075B6Q5	118 aa		13.45	□□□□□ -0.26
LONRF3-205	ENST00000472173	TRBV7-1	A0A0A6YYK4	115 aa		13.45	□□□□□ -0.26
LONRF3-205	ENST00000472173	IGIP	A6NJ69	53 aa		13.45	□□□□□ -0.26
LONRF3-205	ENST00000472173	SAA4	P35542	130 aa		13.45	□□□□□ -0.26
LONRF3-205	ENST00000472173	PMVK	Q15126	192 aa		13.45	□□□□□ -0.26
LONRF3-205	ENST00000472173	LINC00477	Q96M19	166 aa		13.45	□□□□□ -0.26
LONRF3-205	ENST00000472173	ANAPC13	Q9BS18	74 aa		13.45	□□□□□ -0.26
LONRF3-205	ENST00000472173	ERG28	Q9UKR5	140 aa		13.45	□□□□□ -0.26
LONRF3-205	ENST00000472173	PRO1854	Q9UHT4	67 aa		13.45	□□□□□ -0.26
LONRF3-205	ENST00000472173		C9JAW5	83 aa		13.44	□□□□□ -0.26
LONRF3-205	ENST00000472173		F5H697	171 aa		13.44	□□□□□ -0.26
LONRF3-205	ENST00000472173	AJUBA	Q96IF1	538 aa		13.44	□□□□□ -0.26
LONRF3-205	ENST00000472173	OPRPN	Q99935	248 aa	Predicted RBP	13.44	□□□□□ -0.26
LONRF3-205	ENST00000472173	PTPRZ1	P23471	2315 aa	Predicted RBP	13.44	□□□□□ -0.26
LONRF3-205	ENST00000472173	CEP295	Q9C0D2	2601 aa		13.44	□□□□□ -0.26
LONRF3-205	ENST00000472173	TRBV20-1	A0A075B6N2	111 aa		13.44	□□□□□ -0.26
LONRF3-205	ENST00000472173	SLC25A29	Q8N8R3	303 aa		13.44	□□□□□ -0.26
LONRF3-205	ENST00000472173	SIRPD	Q9H106	197 aa		13.43	□□□□□ -0.26
LONRF3-205	ENST00000472173	SS18L2	Q9UHA2	77 aa		13.43	□□□□□ -0.26
LONRF3-205	ENST00000472173	LENEP	Q9Y5L5	61 aa		13.43	□□□□□ -0.26
LONRF3-205	ENST00000472173	EIF4EBP3	O60516	100 aa	Predicted RBP	13.43	□□□□□ -0.26
LONRF3-205	ENST00000472173		A4D1N5	150 aa		13.42	□□□□□ -0.26
LONRF3-205	ENST00000472173	SLC25A20	O43772	301 aa		13.42	□□□□□ -0.26
LONRF3-205	ENST00000472173	SUMO4	Q6EEV6	95 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms