RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 FGF13Q92913 245 aa1.95□□□□□ -2.1
CD46-213ENST00000471987 ZNF714Q96N38 554 aa1.95□□□□□ -2.1
CD46-213ENST00000471987 SND1-IT1Q9HBX3 110 aa1.95□□□□□ -2.1
CD46-213ENST00000471987 OSTCQ9NRP0 149 aa1.95□□□□□ -2.1
CD46-213ENST00000471987 TAS2R4Q9NYW5 299 aa1.95□□□□□ -2.1
CD46-213ENST00000471987 LY96Q9Y6Y9 160 aa1.95□□□□□ -2.1
CD46-213ENST00000471987 ABCC6O95255 1503 aa1.95□□□□□ -2.1
CD46-213ENST00000471987 EFCAB6Q5THR3 1501 aa1.95□□□□□ -2.1
CD46-213ENST00000471987 PLXNB3Q9ULL4 1909 aa1.95□□□□□ -2.1
CD46-213ENST00000471987 CHD6Q8TD26 2715 aa1.95□□□□□ -2.1
CD46-213ENST00000471987 POLR1AO95602 1720 aaPredicted RBP1.94□□□□□ -2.1
CD46-213ENST00000471987 UBR1Q8IWV7 1749 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 SCN9AQ15858 1988 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 CASP8AP2Q9UKL3 1982 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 MAST1Q9Y2H9 1570 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 AFDNP55196 1824 aaKnown RBP1.94□□□□□ -2.1
CD46-213ENST00000471987 E7EQL1 145 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 H3BUT2 72 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 LYRM1O43325 122 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 NUPR1O60356 82 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 TIMM17BO60830 172 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 ZNF737O75373 536 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 IGKV1-39P01597 117 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 IGKV1-16P04430 117 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 IGKV1D-39P04432 117 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 CD28P10747 220 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 FAUP35544 74 aaKnown RBP1.94□□□□□ -2.1
CD46-213ENST00000471987 CCL8P80075 99 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 RPL18Q07020 188 aaKnown RBP1.94□□□□□ -2.1
CD46-213ENST00000471987 CIRBPQ14011 172 aaKnown RBP1.94□□□□□ -2.1
CD46-213ENST00000471987 IGFBP7Q16270 282 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.94□□□□□ -2.1
CD46-213ENST00000471987 NOXRED1Q6NXP6 359 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 PATE2Q6UY27 113 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 ATP11AUNQ6ZP68 121 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 MIR17HGQ75NE6 70 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 ORMDL3Q8N138 153 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 SIGLECL1Q8N7X8 197 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 C3orf56Q8N813 242 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 DAND5Q8N907 189 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 FAM213BQ8TBF2 198 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 B9D2Q9BPU9 175 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 V9GYH0 126 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 COL18A1P39060 1754 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 MYO5AQ9Y4I1 1855 aaKnown RBP1.94□□□□□ -2.1
CD46-213ENST00000471987 NUP188Q5SRE5 1749 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 BRCA2P51587 3418 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 NUP214P35658 2090 aaPredicted RBP1.94□□□□□ -2.1
CD46-213ENST00000471987 DSCAML1Q8TD84 2053 aa1.94□□□□□ -2.1
CD46-213ENST00000471987 UNC13BO14795 1591 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 MICAL3Q7RTP6 2002 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 IGHV3-72A0A0B4J1Y9 119 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 TRAV1-1A0A0B4J248 108 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 IGKV1-6A0A0C4DH72 117 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 C3orf84H3BNL1 204 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 LEPROTO15243 131 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 CREBL2O60519 120 aaPredicted RBP1.93□□□□□ -2.1
CD46-213ENST00000471987 IGHV3-11P01762 117 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 SAA1P0DJI8 122 aaPredicted RBP1.93□□□□□ -2.1
CD46-213ENST00000471987 NPPCP23582 126 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 FUSP35637 526 aaKnown RBP eCLIP1.93□□□□□ -2.1
CD46-213ENST00000471987 MPV17P39210 176 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 RPL27AP46776 148 aaKnown RBP1.93□□□□□ -2.1
CD46-213ENST00000471987 KRTDAPP60985 99 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 BLCAPP62952 87 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 FUT5Q11128 374 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 WFDC2Q14508 124 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 SS18Q15532 418 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 NMSQ5H8A3 153 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 FAM104BQ5XKR9 115 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 SMIM5Q71RC9 77 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 SERP2Q8N6R1 65 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 FAM216BQ8N7L0 139 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 Q8N8P6 123 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 CCL4L1Q8NHW4 92 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 SPTSSAQ969W0 71 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 LINC01600Q96MT4 127 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 CAMK2N2Q96S95 79 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 TRGV9Q99603 122 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 UPK3BQ9BT76 320 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 ZNF355PQ9NSJ1 428 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 CRYBG1Q9Y4K1 1723 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 ARFGEF1Q9Y6D6 1849 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 PRUNE2Q8WUY3 3088 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 NWD1Q149M9 1564 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 PLCH1Q4KWH8 1693 aa1.93□□□□□ -2.1
CD46-213ENST00000471987 PLXNA1Q9UIW2 1896 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 EXPH5Q8NEV8 1989 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 ASXL1Q8IXJ9 1541 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 RANBP2P49792 3224 aaKnown RBP1.92□□□□□ -2.1
CD46-213ENST00000471987 TRPM6Q9BX84 2022 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 TRAV14DV4A0A0A6YYC5 116 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 TRAV17A0A0B4J275 112 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 IGHV1OR15-9A0A0B4J2B8 117 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 PIGBOS1A0A0B4J2F0 54 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 MDFIC2A0A1B0GVS7 189 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 hADV29S1A0JD25 119 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 NAP1L6A6NFF2 107 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 A6NN06 94 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 IBA57-AS1B1ANH7 110 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms