RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PRR20BP86481 221 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 PRR20AP86496 221 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 U3KQK5 164 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 H0Y9J4 135 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 CFPP27918 469 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 GUSBP1Q15486 140 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 Q6ZSV7 163 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 C17orf77Q96MU5 243 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 KIAA2026Q5HYC2 2103 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 MAJINQ3KP22 176 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 ZC2HC1BQ5TFG8 222 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 SIGMAR1Q99720 223 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 ZNF492Q9P255 531 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 MRPL51Q4U2R6 128 aaKnown RBP6.63□□□□□ -1.35
CD47-204ENST00000471694 OCIAD2Q56VL3 154 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 TMEM61Q8N0U2 210 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 LHFPL1Q86WI0 220 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 Q8N7P7 452 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 LINC01548A6NM66 108 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 LYRM9A8MSI8 78 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 OXLD1Q5BKU9 147 aa6.63□□□□□ -1.35
CD47-204ENST00000471694 TINCRA0A1B0GVN0 87 aa6.62□□□□□ -1.35
CD47-204ENST00000471694 K7EMT4 169 aa6.62□□□□□ -1.35
CD47-204ENST00000471694 EGR2P11161 476 aaPredicted RBP6.62□□□□□ -1.35
CD47-204ENST00000471694 TRBV7-3A0A075B6L6 115 aa6.62□□□□□ -1.35
CD47-204ENST00000471694 SIVA1O15304 175 aa6.62□□□□□ -1.35
CD47-204ENST00000471694 Q9H8V8 135 aa6.62□□□□□ -1.35
CD47-204ENST00000471694 COL4A4P53420 1690 aaPredicted RBP6.62□□□□□ -1.35
CD47-204ENST00000471694 Q6ZRM9 215 aa6.62□□□□□ -1.35
CD47-204ENST00000471694 HIGD2AQ9BW72 106 aa6.62□□□□□ -1.35
CD47-204ENST00000471694 FAM104BQ5XKR9 115 aa6.62□□□□□ -1.35
CD47-204ENST00000471694 FAM19A1Q7Z5A9 133 aa6.62□□□□□ -1.35
CD47-204ENST00000471694 RBAKDNA6NC62 111 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 COX7B2Q8TF08 81 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 MIFP14174 115 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 C9orf85Q96MD7 179 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 MED12Q93074 2177 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 SMIM9A6NGZ8 99 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 H0YIZ8 118 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 ETV2O00321 342 aaPredicted RBP6.61□□□□□ -1.35
CD47-204ENST00000471694 LECT2O14960 151 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 TRACP01848 142 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 SEC61GP60059 68 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 AGPAT4-IT1Q9H0P7 198 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 NCOR1O75376 2440 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 A0A096LNI7 61 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 A0A0J9YWU9 116 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 QRFPP83859 136 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 PTPRDP23468 1912 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 IGLC7A0M8Q6 106 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 C9JAW5 83 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 TRBV12-3P01733 135 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 HERV-K104P63124 156 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 DDTP30046 118 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 Q8N1Y9 231 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 PRO3102Q9H379 93 aa6.61□□□□□ -1.35
CD47-204ENST00000471694 IFITM3Q01628 133 aa6.6□□□□□ -1.35
CD47-204ENST00000471694 MORN5Q5VZ52 161 aa6.6□□□□□ -1.35
CD47-204ENST00000471694 ZNF407Q9C0G0 2248 aa6.6□□□□□ -1.35
CD47-204ENST00000471694 CEP250Q9BV73 2442 aa6.6□□□□□ -1.35
CD47-204ENST00000471694 CACNA1DQ01668 2161 aa6.6□□□□□ -1.35
CD47-204ENST00000471694 SPANXA1Q9NS26 97 aa6.6□□□□□ -1.35
CD47-204ENST00000471694 IGLV11-55A0A075B6I3 123 aa6.6□□□□□ -1.35
CD47-204ENST00000471694 RIF1Q5UIP0 2472 aaKnown RBP6.6□□□□□ -1.35
CD47-204ENST00000471694 LMO4P61968 165 aa6.59□□□□□ -1.35
CD47-204ENST00000471694 FAM19A5Q7Z5A7 132 aaPredicted RBP6.59□□□□□ -1.35
CD47-204ENST00000471694 C11orf53Q8IXP5 236 aa6.59□□□□□ -1.35
CD47-204ENST00000471694 NANOS2P60321 138 aaKnown RBP6.59□□□□□ -1.35
CD47-204ENST00000471694 ZNF124Q15973 351 aa6.59□□□□□ -1.35
CD47-204ENST00000471694 ANAPC1Q9H1A4 1944 aa6.59□□□□□ -1.35
CD47-204ENST00000471694 C20orf144Q9BQM9 153 aa6.59□□□□□ -1.36
CD47-204ENST00000471694 C20orf78Q9BR46 151 aa6.59□□□□□ -1.36
CD47-204ENST00000471694 DOCK10Q96BY6 2186 aa6.59□□□□□ -1.36
CD47-204ENST00000471694 CCL25O15444 150 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 CARD19Q96LW7 228 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 ORMDL1Q9P0S3 153 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 LY6G6FQ5SQ64 297 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 NAA38Q9BRA0 125 aaKnown RBP6.58□□□□□ -1.36
CD47-204ENST00000471694 BAALCQ8WXS3 180 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 BVES-AS1Q5T3Y7 98 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 CASC2Q6XLA1 102 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 LENEPQ9Y5L5 61 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 GVINP1Q7Z2Y8 2422 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 C2orf16Q68DN1 1984 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 A0A1B0GV90 55 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 C9JQL5 133 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 CREBBPQ92793 2442 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 IGLV5-52A0A0A0MRZ9 124 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 LINC00269Q8N2A0 174 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 LINC01006Q8NI28 216 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 PLXNA2O75051 1894 aa6.58□□□□□ -1.36
CD47-204ENST00000471694 IGKV1D-37A0A075B6S9 117 aa6.57□□□□□ -1.36
CD47-204ENST00000471694 ZNF664Q8N3J9 261 aa6.57□□□□□ -1.36
CD47-204ENST00000471694 FXYD5Q96DB9 178 aa6.57□□□□□ -1.36
CD47-204ENST00000471694 MUC6Q6W4X9 2439 aa6.57□□□□□ -1.36
CD47-204ENST00000471694 IGKV2D-26A0A0A0MRZ7 120 aa6.57□□□□□ -1.36
CD47-204ENST00000471694 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.57□□□□□ -1.36
CD47-204ENST00000471694 SRSF3P84103 164 aaKnown RBP6.57□□□□□ -1.36
CD47-204ENST00000471694 CXCL5P42830 114 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms