RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 A0A1W2PRE2 83 aa10.4□□□□□ -0.74
COL1A1-203ENST00000471344 PFN1P07737 140 aaKnown RBP10.4□□□□□ -0.74
COL1A1-203ENST00000471344 RNASE3P12724 160 aaKnown RBP10.4□□□□□ -0.74
COL1A1-203ENST00000471344 ZNF876PQ49A33 203 aa10.4□□□□□ -0.74
COL1A1-203ENST00000471344 SMUG1Q53HV7 270 aa10.4□□□□□ -0.74
COL1A1-203ENST00000471344 CFAP126Q5VTH2 177 aa10.4□□□□□ -0.74
COL1A1-203ENST00000471344 LY96Q9Y6Y9 160 aa10.4□□□□□ -0.74
COL1A1-203ENST00000471344 PGPEP1LA6NFU8 196 aa10.39□□□□□ -0.75
COL1A1-203ENST00000471344 TPT1P13693 172 aaKnown RBP10.39□□□□□ -0.75
COL1A1-203ENST00000471344 ZNF506Q5JVG8 444 aa10.39□□□□□ -0.75
COL1A1-203ENST00000471344 SLC25A29Q8N8R3 303 aa10.39□□□□□ -0.75
COL1A1-203ENST00000471344 NHLRC2Q8NBF2 726 aa10.39□□□□□ -0.75
COL1A1-203ENST00000471344 TXNDC17Q9BRA2 123 aa10.39□□□□□ -0.75
COL1A1-203ENST00000471344 ARL2-SNX15V9GYD0 113 aa10.39□□□□□ -0.75
COL1A1-203ENST00000471344 RS1O15537 224 aa10.38□□□□□ -0.75
COL1A1-203ENST00000471344 ZFP69Q49AA0 526 aa10.38□□□□□ -0.75
COL1A1-203ENST00000471344 SAPCD1Q5SSQ6 148 aa10.38□□□□□ -0.75
COL1A1-203ENST00000471344 BOLA1Q9Y3E2 137 aa10.38□□□□□ -0.75
COL1A1-203ENST00000471344 IGKV3D-20A0A0C4DH25 116 aa10.37□□□□□ -0.75
COL1A1-203ENST00000471344 FAM74A7A6NL05 159 aa10.37□□□□□ -0.75
COL1A1-203ENST00000471344 PEX7O00628 323 aa10.37□□□□□ -0.75
COL1A1-203ENST00000471344 IFNA7P01567 189 aa10.37□□□□□ -0.75
COL1A1-203ENST00000471344 Q86TA4 180 aa10.37□□□□□ -0.75
COL1A1-203ENST00000471344 NKX6-2Q9C056 277 aaPredicted RBP10.37□□□□□ -0.75
COL1A1-203ENST00000471344 MSRB1Q9NZV6 116 aa10.37□□□□□ -0.75
COL1A1-203ENST00000471344 FAT1Q14517 4588 aa10.36□□□□□ -0.75
COL1A1-203ENST00000471344 CIDEAO60543 219 aa10.36□□□□□ -0.75
COL1A1-203ENST00000471344 CRYGDP07320 174 aa10.36□□□□□ -0.75
COL1A1-203ENST00000471344 ERVFC1-1P60608 527 aa10.36□□□□□ -0.75
COL1A1-203ENST00000471344 CCL20P78556 96 aa10.36□□□□□ -0.75
COL1A1-203ENST00000471344 Q6ZSN1 163 aa10.36□□□□□ -0.75
COL1A1-203ENST00000471344 SFT2D1Q8WV19 159 aa10.36□□□□□ -0.75
COL1A1-203ENST00000471344 MBD3L1Q8WWY6 194 aa10.36□□□□□ -0.75
COL1A1-203ENST00000471344 A0A087WTM6 91 aa10.35□□□□□ -0.75
COL1A1-203ENST00000471344 UMAD1C9J7I0 102 aa10.35□□□□□ -0.75
COL1A1-203ENST00000471344 K7EP13 123 aa10.35□□□□□ -0.75
COL1A1-203ENST00000471344 EVI2AP22794 236 aa10.35□□□□□ -0.75
COL1A1-203ENST00000471344 PPT1P50897 306 aa10.35□□□□□ -0.75
COL1A1-203ENST00000471344 SH2D6Q7Z4S9 175 aa10.35□□□□□ -0.75
COL1A1-203ENST00000471344 PTH2Q96A98 100 aa10.35□□□□□ -0.75
COL1A1-203ENST00000471344 JPT2Q9H910 190 aa10.35□□□□□ -0.75
COL1A1-203ENST00000471344 TRAV9-2A0A087WT02 112 aa10.34□□□□□ -0.75
COL1A1-203ENST00000471344 CRIP1P50238 77 aa10.34□□□□□ -0.75
COL1A1-203ENST00000471344 RHOHQ15669 191 aa10.34□□□□□ -0.75
COL1A1-203ENST00000471344 NFE4Q86UQ8 179 aa10.34□□□□□ -0.75
COL1A1-203ENST00000471344 SLC51BQ86UW2 128 aa10.34□□□□□ -0.75
COL1A1-203ENST00000471344 HIST1H2BAQ96A08 127 aa10.34□□□□□ -0.75
COL1A1-203ENST00000471344 ZC2HC1AQ96GY0 325 aa10.34□□□□□ -0.75
COL1A1-203ENST00000471344 Q9UF83 564 aa10.34□□□□□ -0.75
COL1A1-203ENST00000471344 TRBV6-4A0A1B0GX49 114 aa10.33□□□□□ -0.76
COL1A1-203ENST00000471344 PAGE4O60829 102 aa10.33□□□□□ -0.76
COL1A1-203ENST00000471344 SULT1A2P50226 295 aa10.33□□□□□ -0.76
COL1A1-203ENST00000471344 TIRAPP58753 221 aa10.33□□□□□ -0.76
COL1A1-203ENST00000471344 EIF5AP63241 154 aaKnown RBP10.33□□□□□ -0.76
COL1A1-203ENST00000471344 Q8N1X5 172 aa10.33□□□□□ -0.76
COL1A1-203ENST00000471344 Q8N3U1 123 aa10.33□□□□□ -0.76
COL1A1-203ENST00000471344 SAMD10Q9BYL1 202 aa10.33□□□□□ -0.76
COL1A1-203ENST00000471344 PARLQ9H300 379 aa10.33□□□□□ -0.76
COL1A1-203ENST00000471344 SCRT2Q9NQ03 307 aa10.33□□□□□ -0.76
COL1A1-203ENST00000471344 IGHV3-38A0A0C4DH36 116 aa10.32□□□□□ -0.76
COL1A1-203ENST00000471344 FABP5P3A8MUU1 101 aa10.32□□□□□ -0.76
COL1A1-203ENST00000471344 H3BVH4 76 aa10.32□□□□□ -0.76
COL1A1-203ENST00000471344 M0R036 132 aa10.32□□□□□ -0.76
COL1A1-203ENST00000471344 SH2D1AO60880 128 aa10.32□□□□□ -0.76
COL1A1-203ENST00000471344 H2AFB1P0C5Y9 115 aa10.32□□□□□ -0.76
COL1A1-203ENST00000471344 TCEAL7Q9BRU2 100 aa10.32□□□□□ -0.76
COL1A1-203ENST00000471344 PRADC1Q9BSG0 188 aa10.32□□□□□ -0.76
COL1A1-203ENST00000471344 GRIFINA4D1Z8 144 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 B4DEV8 164 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 IGHV3-30P01768 117 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 IGHV3-33P01772 117 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 IGHV3-30-3P0DP02 117 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 IGHV3-30-5P0DP03 117 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 S100A4P26447 101 aaKnown RBP10.31□□□□□ -0.76
COL1A1-203ENST00000471344 ASIPP42127 132 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 KRTAP10-1P60331 282 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 LINC01556Q5JQF7 62 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 OR10J3Q5JRS4 329 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 PIK3CD-AS1Q5SR53 167 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 COX8CQ7Z4L0 72 aa10.31□□□□□ -0.76
COL1A1-203ENST00000471344 GAGE12JA6NER3 117 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 KRBOX1C9JBD0 128 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 EREGO14944 169 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 LINC00694P0DN24 101 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 MGST1P10620 155 aaKnown RBP10.3□□□□□ -0.76
COL1A1-203ENST00000471344 GAGE1Q13065 139 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 GAGE4Q13068 117 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 GAGE5Q13069 117 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 GAGE13Q4V321 117 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 DMRTA1Q5VZB9 504 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 CST9LP1Q5W188 147 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 UFSP1Q6NVU6 142 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 ALKAL2Q6UX46 152 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 C14orf178Q8N769 122 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-203ENST00000471344 Q9HAA7 133 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 PGPEP1Q9NXJ5 209 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 ZFP30Q9Y2G7 519 aa10.3□□□□□ -0.76
COL1A1-203ENST00000471344 DNAH8Q96JB1 4490 aa10.29□□□□□ -0.76
COL1A1-203ENST00000471344 TMSB15BA0A087X1C1 80 aa10.29□□□□□ -0.76
COL1A1-203ENST00000471344 SCO2A0A1W2PP80 73 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms