RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 ESDP10768 282 aa19.04■□□□□ 0.64
U2AF1-208ENST00000471250 Q8N1Y9 231 aa19.04■□□□□ 0.64
U2AF1-208ENST00000471250 WFDC9Q8NEX5 89 aa19.04■□□□□ 0.64
U2AF1-208ENST00000471250 C20orf144Q9BQM9 153 aa19.04■□□□□ 0.64
U2AF1-208ENST00000471250 IQCJQ1A5X6 159 aa19.03■□□□□ 0.64
U2AF1-208ENST00000471250 MRPL51Q4U2R6 128 aaKnown RBP19.03■□□□□ 0.64
U2AF1-208ENST00000471250 RNF185Q96GF1 192 aa19.03■□□□□ 0.64
U2AF1-208ENST00000471250 MCRIP2Q9BUT9 160 aaKnown RBP19.03■□□□□ 0.64
U2AF1-208ENST00000471250 U3KQK5 164 aa19.03■□□□□ 0.64
U2AF1-208ENST00000471250 NIPBLQ6KC79 2804 aaeCLIP19.03■□□□□ 0.64
U2AF1-208ENST00000471250 SPRY2O43597 315 aa19.02■□□□□ 0.64
U2AF1-208ENST00000471250 SERF1AO75920 110 aa19.02■□□□□ 0.64
U2AF1-208ENST00000471250 INSP01308 110 aa19.01■□□□□ 0.63
U2AF1-208ENST00000471250 RAB4AP20338 218 aa19.01■□□□□ 0.63
U2AF1-208ENST00000471250 SMIM15Q7Z3B0 74 aa19.01■□□□□ 0.63
U2AF1-208ENST00000471250 C9orf85Q96MD7 179 aa19.01■□□□□ 0.63
U2AF1-208ENST00000471250 WFDC10AQ9H1F0 79 aa19.01■□□□□ 0.63
U2AF1-208ENST00000471250 TRGV11A0A075B6L2 103 aa19.01■□□□□ 0.63
U2AF1-208ENST00000471250 M0R381 172 aa19.01■□□□□ 0.63
U2AF1-208ENST00000471250 NXPH4O95158 308 aa19.01■□□□□ 0.63
U2AF1-208ENST00000471250 HIST1H2BLQ99880 126 aa19.01■□□□□ 0.63
U2AF1-208ENST00000471250 EVI2AP22794 236 aa19■□□□□ 0.63
U2AF1-208ENST00000471250 NUTF2P61970 127 aaKnown RBP19■□□□□ 0.63
U2AF1-208ENST00000471250 LINC00467Q9BRT7 94 aa19■□□□□ 0.63
U2AF1-208ENST00000471250 MDFICQ9P1T7 246 aa19■□□□□ 0.63
U2AF1-208ENST00000471250 FABP4P15090 132 aa18.99■□□□□ 0.63
U2AF1-208ENST00000471250 RCHY1Q96PM5 261 aa18.99■□□□□ 0.63
U2AF1-208ENST00000471250 CBY3A6NI87 242 aa18.98■□□□□ 0.63
U2AF1-208ENST00000471250 D6R8Y8 96 aa18.98■□□□□ 0.63
U2AF1-208ENST00000471250 TEP1Q99973 2627 aaKnown RBP18.98■□□□□ 0.63
U2AF1-208ENST00000471250 ORMDL3Q8N138 153 aa18.98■□□□□ 0.63
U2AF1-208ENST00000471250 XCL2Q9UBD3 114 aa18.98■□□□□ 0.63
U2AF1-208ENST00000471250 C3orf56Q8N813 242 aa18.97■□□□□ 0.63
U2AF1-208ENST00000471250 TMEM18Q96B42 140 aa18.97■□□□□ 0.63
U2AF1-208ENST00000471250 PRELID3AQ96N28 172 aa18.96■□□□□ 0.63
U2AF1-208ENST00000471250 LINC01587Q99440 93 aa18.96■□□□□ 0.63
U2AF1-208ENST00000471250 MUC4Q99102 2169 aa18.96■□□□□ 0.63
U2AF1-208ENST00000471250 CKS2P33552 79 aa18.95■□□□□ 0.62
U2AF1-208ENST00000471250 SHISA2Q6UWI4 295 aa18.95■□□□□ 0.62
U2AF1-208ENST00000471250 TENM1Q9UKZ4 2725 aa18.95■□□□□ 0.62
U2AF1-208ENST00000471250 PPBPP02775 128 aa18.95■□□□□ 0.62
U2AF1-208ENST00000471250 C12orf54Q6X4T0 127 aa18.95■□□□□ 0.62
U2AF1-208ENST00000471250 GTSCR1Q86UQ5 136 aa18.95■□□□□ 0.62
U2AF1-208ENST00000471250 TMEM158Q8WZ71 300 aa18.95■□□□□ 0.62
U2AF1-208ENST00000471250 NIT1Q86X76 327 aa18.94■□□□□ 0.62
U2AF1-208ENST00000471250 OR10D4PQ8NGN7 298 aa18.94■□□□□ 0.62
U2AF1-208ENST00000471250 ATRQ13535 2644 aa18.93■□□□□ 0.62
U2AF1-208ENST00000471250 SMKR1H3BMG3 65 aa18.93■□□□□ 0.62
U2AF1-208ENST00000471250 IGLL1P15814 213 aa18.93■□□□□ 0.62
U2AF1-208ENST00000471250 C1orf158Q8N1D5 194 aa18.93■□□□□ 0.62
U2AF1-208ENST00000471250 DEFB125Q8N687 156 aa18.93■□□□□ 0.62
U2AF1-208ENST00000471250 URB1-AS1Q96HZ7 61 aa18.93■□□□□ 0.62
U2AF1-208ENST00000471250 PACRGQ96M98 296 aaPredicted RBP18.93■□□□□ 0.62
U2AF1-208ENST00000471250 AP1S3Q96PC3 154 aa18.93■□□□□ 0.62
U2AF1-208ENST00000471250 DPH3P1Q9H4G8 78 aa18.93■□□□□ 0.62
U2AF1-208ENST00000471250 WIPF1O43516 503 aa18.92■□□□□ 0.62
U2AF1-208ENST00000471250 GIG44P09565 113 aaPredicted RBP18.92■□□□□ 0.62
U2AF1-208ENST00000471250 HTN1P15515 57 aa18.92■□□□□ 0.62
U2AF1-208ENST00000471250 RPL35AP18077 110 aaKnown RBP18.92■□□□□ 0.62
U2AF1-208ENST00000471250 MORN3Q6PF18 240 aaPredicted RBP18.92■□□□□ 0.62
U2AF1-208ENST00000471250 SYT8Q8NBV8 401 aa18.92■□□□□ 0.62
U2AF1-208ENST00000471250 NCR2O95944 276 aa18.91■□□□□ 0.62
U2AF1-208ENST00000471250 C14orf178Q8N769 122 aaPredicted RBP18.91■□□□□ 0.62
U2AF1-208ENST00000471250 RNASEKQ6P5S7 137 aaKnown RBP18.9■□□□□ 0.62
U2AF1-208ENST00000471250 LAMTOR2Q9Y2Q5 125 aa18.9■□□□□ 0.62
U2AF1-208ENST00000471250 NPYP01303 97 aa18.89■□□□□ 0.61
U2AF1-208ENST00000471250 PRM2P04554 102 aa18.89■□□□□ 0.61
U2AF1-208ENST00000471250 ZNF415Q09FC8 603 aa18.89■□□□□ 0.61
U2AF1-208ENST00000471250 CHCHD1Q96BP2 118 aaKnown RBP18.89■□□□□ 0.61
U2AF1-208ENST00000471250 KIF25-AS1Q9Y6Z4 181 aa18.89■□□□□ 0.61
U2AF1-208ENST00000471250 MRAP2Q96G30 205 aa18.89■□□□□ 0.61
U2AF1-208ENST00000471250 TMEM208Q9BTX3 173 aa18.89■□□□□ 0.61
U2AF1-208ENST00000471250 C1QTNF4Q9BXJ3 329 aa18.89■□□□□ 0.61
U2AF1-208ENST00000471250 SAMD10Q9BYL1 202 aa18.89■□□□□ 0.61
U2AF1-208ENST00000471250 GAS8-AS1O95177 125 aa18.88■□□□□ 0.61
U2AF1-208ENST00000471250 LINC00614P0C842 121 aa18.88■□□□□ 0.61
U2AF1-208ENST00000471250 POM121L12Q8N7R1 296 aa18.87■□□□□ 0.61
U2AF1-208ENST00000471250 C11orf72Q8NBR9 251 aa18.87■□□□□ 0.61
U2AF1-208ENST00000471250 HSBP1O75506 76 aa18.86■□□□□ 0.61
U2AF1-208ENST00000471250 JPT2Q9H910 190 aa18.86■□□□□ 0.61
U2AF1-208ENST00000471250 AMTP48728 403 aa18.85■□□□□ 0.61
U2AF1-208ENST00000471250 LINC00518Q8N0U6 118 aa18.85■□□□□ 0.61
U2AF1-208ENST00000471250 PTH2Q96A98 100 aa18.85■□□□□ 0.61
U2AF1-208ENST00000471250 GSN-AS1Q9NRJ2 163 aa18.85■□□□□ 0.61
U2AF1-208ENST00000471250 GOLT1BQ9Y3E0 138 aa18.85■□□□□ 0.61
U2AF1-208ENST00000471250 TNFRSF6BO95407 300 aa18.85■□□□□ 0.61
U2AF1-208ENST00000471250 SMIM17P0DL12 118 aa18.85■□□□□ 0.61
U2AF1-208ENST00000471250 GATA1P15976 413 aaPredicted RBP18.85■□□□□ 0.61
U2AF1-208ENST00000471250 PMCHP20382 165 aa18.85■□□□□ 0.61
U2AF1-208ENST00000471250 LINC00315P59091 139 aa18.85■□□□□ 0.61
U2AF1-208ENST00000471250 ZNF876PQ49A33 203 aa18.85■□□□□ 0.61
U2AF1-208ENST00000471250 PRSS3P2Q8NHM4 247 aa18.85■□□□□ 0.61
U2AF1-208ENST00000471250 TRAV26-2A0A0B4J265 109 aa18.84■□□□□ 0.61
U2AF1-208ENST00000471250 MGPP08493 103 aa18.84■□□□□ 0.61
U2AF1-208ENST00000471250 CSNK1G2-AS1Q8NCQ2 148 aa18.84■□□□□ 0.61
U2AF1-208ENST00000471250 IGHV3OR16-12A0A075B7B8 117 aa18.83■□□□□ 0.61
U2AF1-208ENST00000471250 LOC389332A0A1B0GUA5 103 aa18.83■□□□□ 0.61
U2AF1-208ENST00000471250 M0R2P5 195 aa18.83■□□□□ 0.61
U2AF1-208ENST00000471250 SMIM6P0DI80 62 aa18.83■□□□□ 0.61
U2AF1-208ENST00000471250 AZU1P20160 251 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms