RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 IGLV10-54A0A075B6I4 117 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 IGKV3D-11A0A0A0MRZ8 115 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 C16orf90A8MZG2 172 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 E7EUB6 86 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 PSCAO43653 123 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 DSCR4P56555 118 aaPredicted RBP2.28□□□□□ -2.04
COL11A1-208ENST00000470170 RPL26P61254 145 aaKnown RBP2.28□□□□□ -2.04
COL11A1-208ENST00000470170 SPRNQ5BIV9 151 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 RPL7L1Q6DKI1 246 aaKnown RBP2.28□□□□□ -2.04
COL11A1-208ENST00000470170 CASC2Q6XLA1 102 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 ZNF826PQ6ZT77 177 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 LYPD6Q86Y78 171 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 OR8B3Q8NGG8 313 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 LINC00052Q96N35 136 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 MGST2Q99735 147 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 PMCHL2Q9BQD1 86 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 S4R3C0 116 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 NUP205Q92621 2012 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 MYH13Q9UKX3 1938 aa2.28□□□□□ -2.04
COL11A1-208ENST00000470170 CEP170BQ9Y4F5 1589 aaPredicted RBP2.27□□□□□ -2.05
COL11A1-208ENST00000470170 PLEKHH2Q8IVE3 1493 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 CHD8Q9HCK8 2581 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 SCN8AQ9UQD0 1980 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 MYO5AQ9Y4I1 1855 aaKnown RBP2.27□□□□□ -2.05
COL11A1-208ENST00000470170 IGHV3OR16-8A0A075B7F1 116 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 ATOX1O00244 68 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 APOC3P02656 99 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 MIFP14174 115 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 SSR2P43308 183 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 ZNF345Q14585 488 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 SPINT4Q6UDR6 99 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 UNQ5815/PRO19632Q6UWF5 114 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 ALKAL2Q6UX46 152 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 ARPINQ7Z6K5 226 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 Q8N8P6 123 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 S100A16Q96FQ6 103 aaKnown RBP2.27□□□□□ -2.05
COL11A1-208ENST00000470170 TMEM141Q96I45 108 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 SUPT6HQ7KZ85 1726 aaKnown RBP2.27□□□□□ -2.05
COL11A1-208ENST00000470170 SHPRHQ149N8 1683 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 ANKRD12Q6UB98 2062 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 DIP2AQ14689 1571 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 TANC2Q9HCD6 1990 aa2.27□□□□□ -2.05
COL11A1-208ENST00000470170 CCDC88AQ3V6T2 1871 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 CPSF1Q10570 1443 aaKnown RBP2.26□□□□□ -2.05
COL11A1-208ENST00000470170 C10orf71Q711Q0 1435 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 SPHKAPQ2M3C7 1700 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 IGLV3-12A0A075B6K2 115 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 A0A087WSZ3 146 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 HMSDA8MTL9 139 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 PDCD5O14737 125 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 ADCYAP1P18509 176 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 CBLN1P23435 193 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 DEFA5Q01523 94 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 ADIRFQ15847 76 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 C2orf82Q6UX34 121 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 COMMD6Q7Z4G1 85 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 LINC00269Q8N2A0 174 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 FAM19A2Q8N3H0 131 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 ZNF431Q8TF32 576 aaPredicted RBP2.26□□□□□ -2.05
COL11A1-208ENST00000470170 POLEQ07864 2286 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 ALPK3Q96L96 1907 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 CCDC88BA6NC98 1476 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 ATP10BO94823 1461 aa2.26□□□□□ -2.05
COL11A1-208ENST00000470170 PLIN4Q96Q06 1357 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 C3P01024 1663 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 UTRNP46939 3433 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 KIF14Q15058 1648 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 BIVM-ERCC5R4GMW8 1640 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 ADGRB2O60241 1585 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 IGKV1D-42A0A075B6H8 117 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 TRAV1-1A0A0B4J248 108 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 A0A0J9YX75 114 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 TCRBV4S1A1TA0A5B7 111 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 IGLC7A0M8Q6 106 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 B4DSR2 109 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 C5orf67F2Z3F1 127 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 ERC2-IT1O76042 136 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 SFT2D2O95562 160 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 IGKCP01834 107 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 NMBP08949 121 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 SLC25A6P12236 298 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 FAUP35544 74 aaKnown RBP2.25□□□□□ -2.05
COL11A1-208ENST00000470170 CCL8P80075 99 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 RBM3P98179 157 aaKnown RBP2.25□□□□□ -2.05
COL11A1-208ENST00000470170 INSL4Q14641 139 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 Q1T7F1 81 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 MYOZ3Q8TDC0 251 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 C20orf166-AS1Q96NR2 134 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 REG4Q9BYZ8 158 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 NDUFB11Q9NX14 153 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 MRPL35Q9NZE8 188 aaKnown RBP2.25□□□□□ -2.05
COL11A1-208ENST00000470170 NDUFA12Q9UI09 145 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 BAHCC1Q9P281 2608 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 ERVK-7P63135 1459 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 CLIP1P30622 1438 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 DAPK1P53355 1430 aa2.25□□□□□ -2.05
COL11A1-208ENST00000470170 ADAMTS12P58397 1594 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 PTPRBP23467 1997 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 SCN9AQ15858 1988 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 TRBV7-7A0A0K0K1E9 115 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms